Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637896
Identifier: 121637896
GI number: 121637896
Start: 2237981
End: 2238475
Strand: Direct
Name: 121637896
Synonym: BCG_2029
Alternate gene names: NA
Gene position: 2237981-2238475 (Clockwise)
Preceding gene: 121637894
Following gene: 121637897
Centisome position: 51.16
GC content: 62.02
Gene sequence:
>495_bases ATGCTGTCAAAATCGAAACGGTCCTGTCGTCGTCGTGAAACCCTTCGCATCGGAGAAAAGATGAGCGCTCCAATTACGAA TCTTCAAGCCGCACAGCGTGATGCCATCATGAACCGACCAGCGGTCAACGGCTTCCCCCATCTGGCCGAGACGCTGCGCC GCGCCGGTGTCCGAACCAATACCTGGTGGCTACCGGCGATGCAAAGCCTGTACGAGACTGATTACGGTCCAGTCCTTGAC CAAGGCGTGCCCCTGATCGACGGCGTGGCCGAGGTCCCGGCATTCGACCGCACGGCCCTCGTCACTGCGCTGCGCGCCGA TCAGGCGGGTCAGACGTCTTTCCGAGAGTTCGCCGCGGCAGCCTGGCGAGCCGGTGTGCTCCGCTACGTCGTGGACCTCG AGAACCGCACCTGCACCTACTTCGGCCTGCATGATCAGACGTATATGGAGCACTACGCGGCAGTGGAGCCTTCCGGTGGT GCCCCTACGAGTTGA
Upstream 100 bases:
>100_bases CCGTAGCAGGCCAGCGAGCTCGAATACGTCTGCTACCAGCCGAGCGATCTCATCGGACATCCCGCCTCCAACTTTGACAA TATATTGTCATCATGGTTCG
Downstream 100 bases:
>100_bases GCTGCGCCCGTCGCAGCGACATTCCAGCAGACCGCGACGTCAGTCTTGGGCGGCCTGACTATCGCGATGATCCGTCGCCC GCTCATCAACCCGGTTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGG APTS
Sequences:
>Translated_164_residues MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGG APTS >Mature_164_residues MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTNTWWLPAMQSLYETDYGPVLD QGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAAAWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGG APTS
Specific function: Unknown
COG id: COG5562
COG function: function code R; Phage envelope protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2012_MYCTU (P64929)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: B70760 - RefSeq: NP_216528.1 - RefSeq: NP_336531.1 - ProteinModelPortal: P64929 - EnsemblBacteria: EBMYCT00000002469 - EnsemblBacteria: EBMYCT00000070583 - GeneID: 888927 - GeneID: 923367 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2067 - KEGG: mtu:Rv2012 - TIGR: MT2067 - TubercuList: Rv2012 - GeneTree: EBGT00050000018483 - HOGENOM: HBG529265 - OMA: ISALRTD - ProtClustDB: CLSK791560
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18203; Mature: 18203
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA CCHHHHHHHHHHCCCCCHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLSKSKRSCRRRETLRIGEKMSAPITNLQAAQRDAIMNRPAVNGFPHLAETLRRAGVRTN CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCC TWWLPAMQSLYETDYGPVLDQGVPLIDGVAEVPAFDRTALVTALRADQAGQTSFREFAAA CCHHHHHHHHHHCCCCCHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH AWRAGVLRYVVDLENRTCTYFGLHDQTYMEHYAAVEPSGGAPTS HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036