Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637887
Identifier: 121637887
GI number: 121637887
Start: 2227218
End: 2228075
Strand: Reverse
Name: 121637887
Synonym: BCG_2020c
Alternate gene names: NA
Gene position: 2228075-2227218 (Counterclockwise)
Preceding gene: 121637888
Following gene: 121637883
Centisome position: 50.93
GC content: 67.95
Gene sequence:
>858_bases GTGGTCAAGCGCTCTCGGGCAACCCGACTTTCGCCGAGCATCTGGTCCGGATGGGAATCACCTCAGTGTCGGTCCATTCG GGCGCGATTGCTGCTACCCCGGGGTCGGTCGCGGCCGCCGAACGCCGATTGTTGCTGGAATCAGCTCGCGGTGACGCCTG ACACCCGGATGCCGGCATCGTCGGCCGCCGGGCGCGACGCGGCGGCCTACGACGCCTGGTATGACTCACCCACCGGGCGG CCGATCCTGGCGACCGAGGTCGCCGCGTTGCGGCCGCTCATCGAGGTCTTTGCCCAGCCACGCTTGGAAATCGGTGTCGG TACAGGACGTTTCGCCGACCTGCTCGGCGTGCGGTTCGGACTCGATCCATCCCGTGATGCGCTGATGTTCGCACGCCGGC GCGGCGTCCTGGTCGCCAATGCCGTCGGCGAGGCGGTCCCTTTCGTCAGCCGGCACTTCGGGGCGGTCCTCATGGCATTC ACGCTCTGTTTCGTCACCGACCCGGCCGCCATATTCCGGGAAACGCGGCGTCTGCTCGCCGACGGCGGCGGCCTTGTTAT CGGGTTCTTGCCTCGCGGGACACCGTGGGCCGACCTGTACGCTCTGCGCGCGGCCCGCGGACAGCCAGGCTACCGCGACG CCCGCTTCTACACCGCGGCCGAACTCGAACAACTGCTCGCAGACTCGGGATTCCGGGTCATCGCCCGCCGCTGCACGCTG CACCAACCGCCGGGACTCGCCCGGTACGACATCGAAGCCGCCCATGACGGTATCCAAGCCGGCGCCGGCTTCGTTGCTAT CTCGGCGGTCGACCAAGCGCACGAGCCTAAGGATGATCACCCACTCGAGTCGGAATAG
Upstream 100 bases:
>100_bases CTCCGTGGGACAGGCCTACCACATCTGGCGCAGCGCGATCTGAGAACGCCGAAAGGAAAACCGATGCCAACCATCACTGT CAGCAGCACATCGTCGCTGT
Downstream 100 bases:
>100_bases CCACCACGACGCCGTTCCTTGGGCCGGGTGCGGGACAGGCCGGCTGGGTATCCGATTGCGGTTGAGCGCGGACGCGATCG TCATCGCCAGACCGGTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPASSAAGRDAAAYDAWYDSPTGR PILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAF TLCFVTDPAAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE
Sequences:
>Translated_285_residues MVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPASSAAGRDAAAYDAWYDSPTGR PILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAF TLCFVTDPAAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE >Mature_285_residues MVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPASSAAGRDAAAYDAWYDSPTGR PILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFGLDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAF TLCFVTDPAAIFRETRRLLADGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2003_MYCTU (P64919)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: A70759 - RefSeq: NP_216519.1 - RefSeq: NP_336522.1 - ProteinModelPortal: P64919 - SMR: P64919 - EnsemblBacteria: EBMYCT00000001484 - EnsemblBacteria: EBMYCT00000072475 - GeneID: 888818 - GeneID: 923378 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2059 - KEGG: mtu:Rv2003c - TIGR: MT2059 - TubercuList: Rv2003c - GeneTree: EBGT00050000018642 - HOGENOM: HBG351277 - OMA: VIGFIDR - ProtClustDB: CLSK791554 - InterPro: IPR013216
Pfam domain/function: PF08241 Methyltransf_11
EC number: NA
Molecular weight: Translated: 31050; Mature: 31050
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPAS CCCCCCCCCCCCHHHCCCCCCHHHHHHHHEECCCCCCCCCCCCHHHCCEECCCCCCCCCC SAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFG CCCCCCCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCC LDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLA CCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE CCCCCCCEEEHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCC >Mature Secondary Structure MVKRSRATRLSPSIWSGWESPQCRSIRARLLLPRGRSRPPNADCCWNQLAVTPDTRMPAS CCCCCCCCCCCCHHHCCCCCCHHHHHHHHEECCCCCCCCCCCCHHHCCEECCCCCCCCCC SAAGRDAAAYDAWYDSPTGRPILATEVAALRPLIEVFAQPRLEIGVGTGRFADLLGVRFG CCCCCCCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCC LDPSRDALMFARRRGVLVANAVGEAVPFVSRHFGAVLMAFTLCFVTDPAAIFRETRRLLA CCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DGGGLVIGFLPRGTPWADLYALRAARGQPGYRDARFYTAAELEQLLADSGFRVIARRCTL CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC HQPPGLARYDIEAAHDGIQAGAGFVAISAVDQAHEPKDDHPLESE CCCCCCCEEEHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036