Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637804
Identifier: 121637804
GI number: 121637804
Start: 2145925
End: 2146233
Strand: Direct
Name: 121637804
Synonym: BCG_1937
Alternate gene names: NA
Gene position: 2145925-2146233 (Clockwise)
Preceding gene: 121637801
Following gene: 121637807
Centisome position: 49.06
GC content: 66.34
Gene sequence:
>309_bases GTGTCTGTGCTGGTCGCGTTTTCCGTCACCCCGCTGGGCGTGGGGGAGGGGGTCGGCGAGATCGTCACCGAAGCGATTCG CGTGGTCCGTGATTCCGGCCTGCCGAACCAGACAGATGCCATGTTCACCGTGATCGAAGGCGATACCTGGGCGGAAGTGA TGGCCGTCGTGCAGCGCGCGGTGGAGGCCGTGGCCGCTCGGGCACCGCGAGTCAGCGCGGTGATCAAGGTGGACTGGCGT CCCGGGGTCACCGACGCGATGACCCAGAAGGTCGCTACCGTCGAGCGGTATCTTCTCCGGCCTGAATAG
Upstream 100 bases:
>100_bases CCCTCACCGCAGCCGATGAGACCCGTTGCACCAGAACCCGCACGAGCCTCGATGCTGCCAGGCCGGCTATGCAGTCGCTG GGGCTGGGTAGGCTCATTGT
Downstream 100 bases:
>100_bases CAGCGCTAAACGCCCGCTCGGCCGCATCCCCATGGACCGCAAATACCACCCTTTGCAGCGACCCCGGCCGGTGCCGACGG ACGGCGCCGACCATCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSVLVAFSVTPLGVGEGVGEIVTEAIRVVRDSGLPNQTDAMFTVIEGDTWAEVMAVVQRAVEAVAARAPRVSAVIKVDWR PGVTDAMTQKVATVERYLLRPE
Sequences:
>Translated_102_residues MSVLVAFSVTPLGVGEGVGEIVTEAIRVVRDSGLPNQTDAMFTVIEGDTWAEVMAVVQRAVEAVAARAPRVSAVIKVDWR PGVTDAMTQKVATVERYLLRPE >Mature_101_residues SVLVAFSVTPLGVGEGVGEIVTEAIRVVRDSGLPNQTDAMFTVIEGDTWAEVMAVVQRAVEAVAARAPRVSAVIKVDWRP GVTDAMTQKVATVERYLLRPE
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1898_MYCTU (P67119)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: G70517 - RefSeq: NP_216414.1 - RefSeq: NP_336406.1 - ProteinModelPortal: P67119 - SMR: P67119 - EnsemblBacteria: EBMYCT00000001645 - EnsemblBacteria: EBMYCT00000069538 - GeneID: 885089 - GeneID: 923276 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1949 - KEGG: mtu:Rv1898 - TIGR: MT1949 - TubercuList: Rv1898 - GeneTree: EBGT00050000017910 - HOGENOM: HBG742314 - OMA: EVMAVIK - ProtClustDB: CLSK791469 - InterPro: IPR002767 - InterPro: IPR016198 - Gene3D: G3DSA:3.30.70.930 - TIGRFAMs: TIGR00106
Pfam domain/function: PF01910 DUF77; SSF89957 Put_thiamin/HMP-bd-like
EC number: NA
Molecular weight: Translated: 10953; Mature: 10822
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLVAFSVTPLGVGEGVGEIVTEAIRVVRDSGLPNQTDAMFTVIEGDTWAEVMAVVQRA CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHH VEAVAARAPRVSAVIKVDWRPGVTDAMTQKVATVERYLLRPE HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVLVAFSVTPLGVGEGVGEIVTEAIRVVRDSGLPNQTDAMFTVIEGDTWAEVMAVVQRA CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHH VEAVAARAPRVSAVIKVDWRPGVTDAMTQKVATVERYLLRPE HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036