Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is pgk
Identifier: 121637367
GI number: 121637367
Start: 1639137
End: 1640375
Strand: Direct
Name: pgk
Synonym: BCG_1498
Alternate gene names: 121637367
Gene position: 1639137-1640375 (Clockwise)
Preceding gene: 121637366
Following gene: 121637368
Centisome position: 37.47
GC content: 64.57
Gene sequence:
>1239_bases ATGAGCGTTGCAAACCTCAAGGATCTACTCGCCGAAGGTGTTTCGGGGCGTGGAGTGCTGGTGCGCTCCGATCTCAACGT TCCGCTCGACGAGGACGGCACCATTACCGATGCGGGCCGCATCATCGCGTCGGCGCCGACGTTGAAGGCGTTGCTCGACG CCGACGCCAAGGTGGTGGTTGCCGCGCACTTGGGACGTCCCAAGGACGGGCCGGACCCGACACTGTCGCTGGCGCCGGTC GCCGTGGCGCTGGGTGAGCAACTCGGCCGGCACGTCCAGCTGGCTGGAGACGTTGTCGGCGCCGATGCGCTGGCCCGCGC CGAGGGGCTCACCGGCGGCGACATCCTGCTGCTGGAGAACATCCGCTTCGACAAACGCGAAACCAGCAAGAACGATGACG ACCGGCGGGCACTGGCCAAGCAGCTGGTCGAACTGGTCGGAACGGGAGGCGTTTTCGTCTCCGACGGCTTTGGGGTGGTG CACCGCAAGCAAGCCTCGGTCTATGACATCGCAACCCTGTTGCCGCACTACGCCGGCACGCTGGTCGCCGACGAGATGCG GGTACTGGAGCAGTTGACCAGCTCGACCCAGCGGCCCTATGCGGTAGTGCTCGGCGGATCAAAGGTGTCCGACAAGCTGG GTGTCATCGAGTCGCTGGCGACCAAGGCGGACAGCATTGTGATTGGCGGCGGAATGTGCTTCACATTCCTTGCTGCACAG GGATTTTCGGTTGGCACATCGCTGCTGGAAGACGACATGATCGAAGTCTGTCGCGGGCTGCTGGAAACCTATCACGACGT GTTGCGGCTGCCCGTGGATCTAGTGGTCACGGAGAAGTTCGCCGCCGACTCGCCGCCCCAGACGGTCGACGTCGGCGCTG TGCCCAATGGCTTGATGGGCCTGGATATCGGGCCGGGATCGATCAAACGGTTCAGCACGCTGCTGTCCAACGCCGGGACC ATCTTCTGGAACGGGCCGATGGGAGTATTCGAGTTCCCGGCTTATGCGGCCGGCACCAGAGGCGTCGCCGAGGCGATCGT CGCCGCCACCGGCAAAGGGGCGTTTAGTGTGGTCGGCGGCGGTGACTCCGCGGCCGCAGTGCGCGCGATGAACATCCCCG AGGGCGCCTTCTCACACATATCCACCGGCGGCGGTGCCTCGCTGGAATACCTTGAGGGCAAGACGCTTCCCGGCATCGAG GTACTGAGCCGTGAGCAGCCAACCGGAGGAGTTTTGTGA
Upstream 100 bases:
>100_bases TCGACGACCAGGCCAAGGTGGTGTCGTGGTACGACAACGAGTGGGGCTACTCCAACCGCCTGGTTGATCTGGTCACGCTG GTCGGCAAGTCGCTCTAGCC
Downstream 100 bases:
>100_bases GCCGCAAGCCGCTGATAGCCGGCAACTGGAAGATGAACCTCAACCACTACGAGGCGATCGCGCTGGTGCAAAAGATCGCG TTCTCGTTGCCGGACAAGTA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPV AVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLENIRFDKRETSKNDDDRRALAKQLVELVGTGGVFVSDGFGVV HRKQASVYDIATLLPHYAGTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQ GFSVGTSLLEDDMIEVCRGLLETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMGLDIGPGSIKRFSTLLSNAGT IFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIE VLSREQPTGGVL
Sequences:
>Translated_412_residues MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPV AVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLENIRFDKRETSKNDDDRRALAKQLVELVGTGGVFVSDGFGVV HRKQASVYDIATLLPHYAGTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQ GFSVGTSLLEDDMIEVCRGLLETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMGLDIGPGSIKRFSTLLSNAGT IFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIE VLSREQPTGGVL >Mature_411_residues SVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPVA VALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLENIRFDKRETSKNDDDRRALAKQLVELVGTGGVFVSDGFGVVH RKQASVYDIATLLPHYAGTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQG FSVGTSLLEDDMIEVCRGLLETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMGLDIGPGSIKRFSTLLSNAGTI FWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEV LSREQPTGGVL
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=420, Percent_Identity=38.3333333333333, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI31543397, Length=411, Percent_Identity=39.9026763990268, Blast_Score=263, Evalue=2e-70, Organism=Escherichia coli, GI1789294, Length=406, Percent_Identity=41.6256157635468, Blast_Score=261, Evalue=6e-71, Organism=Caenorhabditis elegans, GI17508823, Length=408, Percent_Identity=40.1960784313725, Blast_Score=278, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6319857, Length=405, Percent_Identity=38.5185185185185, Blast_Score=255, Evalue=8e-69, Organism=Drosophila melanogaster, GI17136394, Length=418, Percent_Identity=38.9952153110048, Blast_Score=265, Evalue=4e-71, Organism=Drosophila melanogaster, GI24581203, Length=413, Percent_Identity=36.0774818401937, Blast_Score=243, Evalue=1e-64,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_MYCBO (P65701)
Other databases:
- EMBL: BX248338 - RefSeq: NP_855124.1 - ProteinModelPortal: P65701 - SMR: P65701 - EnsemblBacteria: EBMYCT00000018047 - GeneID: 1092329 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1472 - GeneTree: EBGT00050000017271 - HOGENOM: HBG453500 - OMA: NCAIILP - ProtClustDB: PRK00073 - BioCyc: MBOV233413:MB1472-MONOMER - BRENDA: 2.7.2.3 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 42513; Mature: 42382
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 40-40 BINDING 122-122 BINDING 162-162 BINDING 212-212 BINDING 300-300 BINDING 331-331
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVV CCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEECCCHHEECCHHHHHHHCCCCEEEE AAHLGRPKDGPDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLEN EEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCHHCHHHHHHHCCCCCCCEEEEEC IRFDKRETSKNDDDRRALAKQLVELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYAGT CCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHH LVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQ HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHC GFSVGTSLLEDDMIEVCRGLLETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHCCCCCCCEEECCCCCCCCEE LDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGG EECCCCHHHHHHHHHHCCCEEEECCCCCHHCCCCHHCCCHHHHHHHHHHCCCCCEEEEEC GDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL CCCCCEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCC >Mature Secondary Structure SVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVV CCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEECCCHHEECCHHHHHHHCCCCEEEE AAHLGRPKDGPDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLEN EEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCHHCHHHHHHHCCCCCCCEEEEEC IRFDKRETSKNDDDRRALAKQLVELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYAGT CCCCCHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHH LVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQ HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHC GFSVGTSLLEDDMIEVCRGLLETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHCCCCCCCEEECCCCCCCCEE LDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGG EECCCCHHHHHHHHHHCCCEEEECCCCCHHCCCCHHCCCHHHHHHHHHHCCCCCEEEEEC GDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL CCCCCEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972