Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637249
Identifier: 121637249
GI number: 121637249
Start: 1507408
End: 1509015
Strand: Reverse
Name: 121637249
Synonym: BCG_1380c
Alternate gene names: NA
Gene position: 1509015-1507408 (Counterclockwise)
Preceding gene: 121637250
Following gene: 121637248
Centisome position: 34.5
GC content: 64.3
Gene sequence:
>1608_bases ATGCCGGCGAAAAAGACCATGGCGCAACGCCTGGGCCAGGCACTCGAGACGATGACCCGTCAGTGCGGCCAGCTGCCCGA GACCCCGGCGTATGGCTCCTGGTTGCTTGGGCGGGTGTCAGAAAGCCCGTCGCGTCGCTGGGTACGCATCAAGCGCATCG TGACCGTCTATATCATGACGGCGAACCTGACCGGGATCGTGGTCGCGCTGCTAGTGGTGACCTTCGCTTTTCCGGTGCCT AGCATCTACACCGACGCCCCATGGTGGGTCACCTTCGGGGTCGCACCGGCCTATGCGACGCTCGCACTGGCCATCGGCAC CTACTGGATAACCACGCGAATCGTCAGAGCGTCCATACGGTGGGCGATCGAGGAACGCGCGCCGAGCCAGGCCGACGGGC GCAACACCTTGCTGCTCCCGTTTCGAGTGGCAGCCGTCCACCTCATTCTGTGGGATATCGGCGGGGCGTTGTTGGCCACG CTCTACGGGCTGGCCAACCGCGTATTCGTCACCATAATTTTGTTCTCGGTGACTATCTGCGGCGTTTTGGTAGCCACCAA TTGCTACTTGTTCACCGAGTTCGCGCTGCGACCCGTAGCCGCTAAAGCACTCGAAGCGGGACGACCGCCACGACGGTTTG CACCGGGCATCATGGGCCGAACGATGACGGTGTGGTCGCTAGGTTCAGGCGTGCCTGTGACCGGCATCGCCACGACAGCG CTCTACGTCCTATTGGTGCACAATCTGACCGAAACGCAGCTCGCGTCGGCGGTGTTGATCCTGTCGATAACCACGTTGAT CTTCGGGTTTCTCGTGATGTGGATTCTTGCTTGGCTGACGGCGGCGCCGGTGCGAGTGGTGCGCGCTGCGCTCAAGCGTG TCGAGCAGGGGGATCTGCGAGGGGATCTGGTGGTGTTCGACGGCACCGAACTCGGTGAGCTGCAGCGTGGTTTCAACGCG ATGGTCAACGGCCTGCGCGAGCGCGAACGCGTGCGCGACCTTTTCGGCCGCCACGTCGGACGCGAAGTCGCCGCCGCCGC CGAGCGTGAACGACCACAGCTAGGCGGCGAAGACCGCCACGCCGCCGTCGTCTTCGTCGACATCGTCGGCTCCACCCAGC TGGTGGACAACCAACCTGCCGCCCACGTGGTCAAGCTCCTCAACCGGTTTTTCGCGATCGTCGTCAACGAGGTCGACCGT CACCACGGACTGATCAACAAGTTCGCAGGCGACGCCGCCCTGGCCATCTTCGGAGCCCCGAACCGCCTCGACCGTCCCGA AGACGCCGCGCTGGCCGCCGCCCGGGCCATAGCCGATCGGCTGGCCAACGAGATGCCCGAGGTCCAAGCCGGCATCGGGG TGGCGGCAGGCCAGATCGTCGCCGGCAATGTCGGCGCCAAGCAAAGATTCGAATACACAGTGGTCGGCAAGCCGGTCAAC CAGGCGGCCCGATTGTGCGAACTGGCCAAATCACACCCCGCGCGATTGCTAGCATCCTCGGACACACTGCACGCTGCCAG CGAAACCGAGCGTGCCCATTGGTCTTTGGGCGAGACGGTGACGCTGCGCGGACATGAGCAGCCGACTCGGCTGGCCGTGC CCACCTAA
Upstream 100 bases:
>100_bases GCCTGCTCAGTCGGCCGACATAGTCGGCGGTGCACTGGGCGATCACCAGACCCACACGATTTACCGTGGGGCGCATCCGA CAGATTAGGCTGACGCCACC
Downstream 100 bases:
>100_bases GCCGGGCAAACAACACGAGCGCGCCAACCGGTCGCACCCGACTCTTCGACAAACTAGTCTGACGCCACAATGTCGGCCAA GAAGAGCACGGCGCAACGCT
Product: putative adenylate cyclase
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: NA
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MPAKKTMAQRLGQALETMTRQCGQLPETPAYGSWLLGRVSESPSRRWVRIKRIVTVYIMTANLTGIVVALLVVTFAFPVP SIYTDAPWWVTFGVAPAYATLALAIGTYWITTRIVRASIRWAIEERAPSQADGRNTLLLPFRVAAVHLILWDIGGALLAT LYGLANRVFVTIILFSVTICGVLVATNCYLFTEFALRPVAAKALEAGRPPRRFAPGIMGRTMTVWSLGSGVPVTGIATTA LYVLLVHNLTETQLASAVLILSITTLIFGFLVMWILAWLTAAPVRVVRAALKRVEQGDLRGDLVVFDGTELGELQRGFNA MVNGLRERERVRDLFGRHVGREVAAAAERERPQLGGEDRHAAVVFVDIVGSTQLVDNQPAAHVVKLLNRFFAIVVNEVDR HHGLINKFAGDAALAIFGAPNRLDRPEDAALAAARAIADRLANEMPEVQAGIGVAAGQIVAGNVGAKQRFEYTVVGKPVN QAARLCELAKSHPARLLASSDTLHAASETERAHWSLGETVTLRGHEQPTRLAVPT
Sequences:
>Translated_535_residues MPAKKTMAQRLGQALETMTRQCGQLPETPAYGSWLLGRVSESPSRRWVRIKRIVTVYIMTANLTGIVVALLVVTFAFPVP SIYTDAPWWVTFGVAPAYATLALAIGTYWITTRIVRASIRWAIEERAPSQADGRNTLLLPFRVAAVHLILWDIGGALLAT LYGLANRVFVTIILFSVTICGVLVATNCYLFTEFALRPVAAKALEAGRPPRRFAPGIMGRTMTVWSLGSGVPVTGIATTA LYVLLVHNLTETQLASAVLILSITTLIFGFLVMWILAWLTAAPVRVVRAALKRVEQGDLRGDLVVFDGTELGELQRGFNA MVNGLRERERVRDLFGRHVGREVAAAAERERPQLGGEDRHAAVVFVDIVGSTQLVDNQPAAHVVKLLNRFFAIVVNEVDR HHGLINKFAGDAALAIFGAPNRLDRPEDAALAAARAIADRLANEMPEVQAGIGVAAGQIVAGNVGAKQRFEYTVVGKPVN QAARLCELAKSHPARLLASSDTLHAASETERAHWSLGETVTLRGHEQPTRLAVPT >Mature_534_residues PAKKTMAQRLGQALETMTRQCGQLPETPAYGSWLLGRVSESPSRRWVRIKRIVTVYIMTANLTGIVVALLVVTFAFPVPS IYTDAPWWVTFGVAPAYATLALAIGTYWITTRIVRASIRWAIEERAPSQADGRNTLLLPFRVAAVHLILWDIGGALLATL YGLANRVFVTIILFSVTICGVLVATNCYLFTEFALRPVAAKALEAGRPPRRFAPGIMGRTMTVWSLGSGVPVTGIATTAL YVLLVHNLTETQLASAVLILSITTLIFGFLVMWILAWLTAAPVRVVRAALKRVEQGDLRGDLVVFDGTELGELQRGFNAM VNGLRERERVRDLFGRHVGREVAAAAERERPQLGGEDRHAAVVFVDIVGSTQLVDNQPAAHVVKLLNRFFAIVVNEVDRH HGLINKFAGDAALAIFGAPNRLDRPEDAALAAARAIADRLANEMPEVQAGIGVAAGQIVAGNVGAKQRFEYTVVGKPVNQ AARLCELAKSHPARLLASSDTLHAASETERAHWSLGETVTLRGHEQPTRLAVPT
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1319_MYCTU (P0A4Y2)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: C70769 - RefSeq: NP_215835.1 - RefSeq: NP_335809.1 - ProteinModelPortal: P0A4Y2 - SMR: P0A4Y2 - EnsemblBacteria: EBMYCT00000002013 - EnsemblBacteria: EBMYCT00000072857 - GeneID: 886911 - GeneID: 924697 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1361 - KEGG: mtu:Rv1319c - TIGR: MT1361 - TubercuList: Rv1319c - GeneTree: EBGT00050000015402 - HOGENOM: HBG571123 - OMA: RPPNRAV - ProtClustDB: CLSK791097 - InterPro: IPR001054 - InterPro: IPR003660 - Gene3D: G3DSA:3.30.70.1230 - SMART: SM00044 - SMART: SM00304
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP; SSF55073 A/G_cyclase
EC number: 4.6.1.1
Molecular weight: Translated: 58098; Mature: 57967
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50125 GUANYLATE_CYCLASE_2; PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x141bcea0)-; HASH(0x15a6d8d0)-; HASH(0x12875244)-; HASH(0x155c9bb0)-; HASH(0x14d830e8)-; HASH(0x15ab503c)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKKTMAQRLGQALETMTRQCGQLPETPAYGSWLLGRVSESPSRRWVRIKRIVTVYIMT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHEEHHHH ANLTGIVVALLVVTFAFPVPSIYTDAPWWVTFGVAPAYATLALAIGTYWITTRIVRASIR CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH WAIEERAPSQADGRNTLLLPFRVAAVHLILWDIGGALLATLYGLANRVFVTIILFSVTIC HHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLVATNCYLFTEFALRPVAAKALEAGRPPRRFAPGIMGRTMTVWSLGSGVPVTGIATTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHHH LYVLLVHNLTETQLASAVLILSITTLIFGFLVMWILAWLTAAPVRVVRAALKRVEQGDLR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GDLVVFDGTELGELQRGFNAMVNGLRERERVRDLFGRHVGREVAAAAERERPQLGGEDRH CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AAVVFVDIVGSTQLVDNQPAAHVVKLLNRFFAIVVNEVDRHHGLINKFAGDAALAIFGAP EEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC NRLDRPEDAALAAARAIADRLANEMPEVQAGIGVAAGQIVAGNVGAKQRFEYTVVGKPVN CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCHH QAARLCELAKSHPARLLASSDTLHAASETERAHWSLGETVTLRGHEQPTRLAVPT HHHHHHHHHHCCCHHEEECCCCHHCCHHCCHHHCCCCCEEEEECCCCCCCCCCCH >Mature Secondary Structure PAKKTMAQRLGQALETMTRQCGQLPETPAYGSWLLGRVSESPSRRWVRIKRIVTVYIMT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHEEHHHH ANLTGIVVALLVVTFAFPVPSIYTDAPWWVTFGVAPAYATLALAIGTYWITTRIVRASIR CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH WAIEERAPSQADGRNTLLLPFRVAAVHLILWDIGGALLATLYGLANRVFVTIILFSVTIC HHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLVATNCYLFTEFALRPVAAKALEAGRPPRRFAPGIMGRTMTVWSLGSGVPVTGIATTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHHH LYVLLVHNLTETQLASAVLILSITTLIFGFLVMWILAWLTAAPVRVVRAALKRVEQGDLR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GDLVVFDGTELGELQRGFNAMVNGLRERERVRDLFGRHVGREVAAAAERERPQLGGEDRH CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AAVVFVDIVGSTQLVDNQPAAHVVKLLNRFFAIVVNEVDRHHGLINKFAGDAALAIFGAP EEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC NRLDRPEDAALAAARAIADRLANEMPEVQAGIGVAAGQIVAGNVGAKQRFEYTVVGKPVN CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCHH QAARLCELAKSHPARLLASSDTLHAASETERAHWSLGETVTLRGHEQPTRLAVPT HHHHHHHHHHCCCHHEEECCCCHHCCHHCCHHHCCCCCEEEEECCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036