Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637028
Identifier: 121637028
GI number: 121637028
Start: 1256679
End: 1257560
Strand: Reverse
Name: 121637028
Synonym: BCG_1157c
Alternate gene names: NA
Gene position: 1257560-1256679 (Counterclockwise)
Preceding gene: 121637029
Following gene: 121637023
Centisome position: 28.75
GC content: 65.76
Gene sequence:
>882_bases ATGACGGTTCCTCCCGCTGGCCCCTACGGCAACTACCCCTACGGCCCGAATACGTATGGGCAGGACCTGTATTGGGGAGG CCAACCGCAGGGCGGCTCCTATCCGCCGGCCTACCCACCCCAGCAGTATCCGCCCGGCTGGCCGGCGGGGCCCTATCCGC CAGGACCACCTCCGCCCGGGCCAGGATCGAAGACACCGTGGCTGATCCTCGCCGGCCTCGCGGTGCTGGGTGTCATCCTA CTGGTGGTGATCCTGGTGATCGGCCTCCGCGGCGACAACAAGTCGACCACGGCAACCTCTCCGGCGACGAGTGCTCCCAC GTCGCAACCGTTTTCCCAGCAAACCGCAACCGGTTGTACCCCAAATGTGTCCGGCGGTGTGCAGCCCATCGGCGATTCGA TCAGTGCGGGTAAGCTGTCGTTCCCGACCAGCGCGGCACCCGGGTGGTCGGCGTTCTCCGACGACCAGAACCCGAACCTC ATCGACGCGGTGGGCGTCGGCCACGAGGTGGCCGGTGCCGACCAGTGGATGATGCAAGCCGAGGTTGCGATAACCAACTT CGTCACCACCATGGACGTCGCCGCGCAAGCATCGAAGTTGATGCAATGCGTGGCCGACGGCCCCGGCTACGCAGGCTCGT CGCCCACCCTGGGCCCGACCAAGACGTCGTCGATCACCGTCGACGGGGTCAGGGCCGCCCGGGTAGACGCCGATATCACA ATCGCCGACAGTTCACGCAACGTCAAAGGTGATTCGGTCACGATCATCGCGGTCGACACCAAGCCGGTCACCGTCTTCCT GGGCGCCACCCCCATCGGTGATGCAACCTCGCGCGCCACCGTCGAGAGGGTCATTGAGGCGCTGAAGGTCAACAAGTCCT GA
Upstream 100 bases:
>100_bases ACCGTGGCCTGATCGGCGACAGGCTGTCGATCGAGGATCTGGACCGCCGTCTGGACGTGCTGGCAATGGCCAAGGCCGAG CAGCTCGACAGCGATCGGCT
Downstream 100 bases:
>100_bases GGTTACGCACCGTTATTTGGCCCGCCCGAATTCTGACCCGCAATATCGGTGATCGGGAAGTTGGACATCGGCTTGGGCGA TGAGGTGTTGGGCAACGGCG
Product: putative membrane glycine and proline rich protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTVPPAGPYGNYPYGPNTYGQDLYWGGQPQGGSYPPAYPPQQYPPGWPAGPYPPGPPPPGPGSKTPWLILAGLAVLGVIL LVVILVIGLRGDNKSTTATSPATSAPTSQPFSQQTATGCTPNVSGGVQPIGDSISAGKLSFPTSAAPGWSAFSDDQNPNL IDAVGVGHEVAGADQWMMQAEVAITNFVTTMDVAAQASKLMQCVADGPGYAGSSPTLGPTKTSSITVDGVRAARVDADIT IADSSRNVKGDSVTIIAVDTKPVTVFLGATPIGDATSRATVERVIEALKVNKS
Sequences:
>Translated_293_residues MTVPPAGPYGNYPYGPNTYGQDLYWGGQPQGGSYPPAYPPQQYPPGWPAGPYPPGPPPPGPGSKTPWLILAGLAVLGVIL LVVILVIGLRGDNKSTTATSPATSAPTSQPFSQQTATGCTPNVSGGVQPIGDSISAGKLSFPTSAAPGWSAFSDDQNPNL IDAVGVGHEVAGADQWMMQAEVAITNFVTTMDVAAQASKLMQCVADGPGYAGSSPTLGPTKTSSITVDGVRAARVDADIT IADSSRNVKGDSVTIIAVDTKPVTVFLGATPIGDATSRATVERVIEALKVNKS >Mature_292_residues TVPPAGPYGNYPYGPNTYGQDLYWGGQPQGGSYPPAYPPQQYPPGWPAGPYPPGPPPPGPGSKTPWLILAGLAVLGVILL VVILVIGLRGDNKSTTATSPATSAPTSQPFSQQTATGCTPNVSGGVQPIGDSISAGKLSFPTSAAPGWSAFSDDQNPNLI DAVGVGHEVAGADQWMMQAEVAITNFVTTMDVAAQASKLMQCVADGPGYAGSSPTLGPTKTSSITVDGVRAARVDADITI ADSSRNVKGDSVTIIAVDTKPVTVFLGATPIGDATSRATVERVIEALKVNKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29890; Mature: 29759
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPPAGPYGNYPYGPNTYGQDLYWGGQPQGGSYPPAYPPQQYPPGWPAGPYPPGPPPPG CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGSKTPWLILAGLAVLGVILLVVILVIGLRGDNKSTTATSPATSAPTSQPFSQQTATGCT CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC PNVSGGVQPIGDSISAGKLSFPTSAAPGWSAFSDDQNPNLIDAVGVGHEVAGADQWMMQA CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCHHHHHHH EVAITNFVTTMDVAAQASKLMQCVADGPGYAGSSPTLGPTKTSSITVDGVRAARVDADIT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCEEE IADSSRNVKGDSVTIIAVDTKPVTVFLGATPIGDATSRATVERVIEALKVNKS EECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVPPAGPYGNYPYGPNTYGQDLYWGGQPQGGSYPPAYPPQQYPPGWPAGPYPPGPPPPG CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGSKTPWLILAGLAVLGVILLVVILVIGLRGDNKSTTATSPATSAPTSQPFSQQTATGCT CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC PNVSGGVQPIGDSISAGKLSFPTSAAPGWSAFSDDQNPNLIDAVGVGHEVAGADQWMMQA CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCHHHHHHH EVAITNFVTTMDVAAQASKLMQCVADGPGYAGSSPTLGPTKTSSITVDGVRAARVDADIT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCEEE IADSSRNVKGDSVTIIAVDTKPVTVFLGATPIGDATSRATVERVIEALKVNKS EECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA