Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636007
Identifier: 121636007
GI number: 121636007
Start: 133451
End: 134404
Strand: Reverse
Name: 121636007
Synonym: BCG_0127c
Alternate gene names: NA
Gene position: 134404-133451 (Counterclockwise)
Preceding gene: 121636008
Following gene: 121636006
Centisome position: 3.07
GC content: 67.4
Gene sequence:
>954_bases GTGTCCACCCGCCAGGCCGCCGAAGCCGACCTGGCCGGCAAAGCCGCTCAATATCGTCCCGACGAGCTGGCCCGCTACGC CCAGCGGGTCATGGACTGGCTACACCCCGACGGCGACCTCACCGACACCGAACGCGCCCGCAAACGCGGCATCACCCTGA GCAACCAGCAATACGACGGCATGTCACGGCTAAGTGGCTACCTGACCCCCCAAGCGCGGGCCACCTTTGAAGCCGTGCTA GCCAAACTGGCCGCCCCCGGCGCGACCAACCCCGACGACCACACCCCGGTCATCGACACCACCCCCGATGCGGCCGCCAT CGACCGCGACACCCGCAGCCAAGCCCAACGCAACCACGACGGGCTGCTGGCCGGGCTGCGCGCGCTGATCGCCTCCGGGG AACTGGGCCAACACAACGGTCTTCCCGTCTCGATCGTGGTCACCACCACCCTGACCGACCTGCAAACCGGCGCCGGCAAG GGCTTCACCGGCGGCGGCACCCTGCTACCCATGGCCGATGTGATCCGCATGACCAGCCACGCCCACCACTACTCCCCCGC AAGCGGGAGGTACCCCCAGGCGATCTTCGACCACGGCACACCCCTGGCGCTGTATCACACCAAACGCCTAGCCTCCCCGG CCCAGCGGATCATGCTGTTCGCCAACGACCGCGGCTGCACCAAACCCGGCTGTGACGCACCGGCCTACCACAGCCAAGCC CACCACGTCACCGGCTGGACCAGCACCGGACGCACCGACATCACCGACCTCACCCTGGCCTGCGACCCCGACAACCGACT CGCCGAAAAAGGCTGGACCACCCGCAAAAACACCCACGGCCACACCGAATGGCTACCACCACCCCACCTCGACCACGGCC AACCGTGGACCAACACCTTCCACCACCCCGAACGATTCCTCCACAACCAAGACGACGACGACAAACCCGATTGA
Upstream 100 bases:
>100_bases TTGACCGCCACCGCCACCGCCCAACGCCAGGGCCTGATCGGCGAGGCGCACATCAAAGTGATTCGCGCCCTTTTTCGCCC ACCTGCCCGCCGCGGTGGAT
Downstream 100 bases:
>100_bases CCCCTGAACGCGAGCCCCACGGCGCTCACGCACCACCCGGGCCACCGTGCTCGCACAAGCCACAACGGCCGGGAGCTTTA ACCACCACGCATCAACCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQARATFEAVL AKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGK GFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQA HHVTGWTSTGRTDITDLTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPWTNTFHHPERFLHNQDDDDKPD
Sequences:
>Translated_317_residues MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQARATFEAVL AKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGK GFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQA HHVTGWTSTGRTDITDLTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPWTNTFHHPERFLHNQDDDDKPD >Mature_316_residues STRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDGMSRLSGYLTPQARATFEAVLA KLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGKG FTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAH HVTGWTSTGRTDITDLTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPWTNTFHHPERFLHNQDDDDKPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 34662; Mature: 34531
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDG CCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC MSRLSGYLTPQARATFEAVLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHD HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHCHH GLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSH HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH AHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQA HCCCCCCCCCCCHHHHCCCCCEEEEHHHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCC HHVTGWTSTGRTDITDLTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPWTNTF CEECCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HHPERFLHNQDDDDKPD CCHHHHHCCCCCCCCCC >Mature Secondary Structure STRQAAEADLAGKAAQYRPDELARYAQRVMDWLHPDGDLTDTERARKRGITLSNQQYDG CCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCC MSRLSGYLTPQARATFEAVLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHD HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHCHH GLLAGLRALIASGELGQHNGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSH HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH AHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQA HCCCCCCCCCCCHHHHCCCCCEEEEHHHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCC HHVTGWTSTGRTDITDLTLACDPDNRLAEKGWTTRKNTHGHTEWLPPPHLDHGQPWTNTF CEECCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HHPERFLHNQDDDDKPD CCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]