Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636008
Identifier: 121636008
GI number: 121636008
Start: 134175
End: 134957
Strand: Reverse
Name: 121636008
Synonym: BCG_0128c
Alternate gene names: NA
Gene position: 134957-134175 (Counterclockwise)
Preceding gene: 121636016
Following gene: 121636007
Centisome position: 3.09
GC content: 63.86
Gene sequence:
>783_bases GTGCGGTACCTTCCCGTATCAACTCGTAGGATCTGGGTAAATCCCTTGTGTCACTTCAGTTTCACGGTTATCAGCGGGGC GCTCTTTGTCAGTGCCCGACGTTATGATTCGAACATGTTAGCGAATAGCCGGGAGGAGCTTGTCGAGGTCTTTGATGCGC TGGATGCCGAGCTGGACCGCTTGGACGAGGTGTCTTTTGAGGTGTTGACCACCCCGGAACGGCTGCGGTCTCTGGAACGT CTGGAATGCTTGGTGCGCCGGCTACCGGCGGTCGGGCACACGTTGATCAACCAACTCGACACCCAAGCCAGCGAGGAAGA ACTGGGCGGCACGCTGTGCTGCGCGCTGGCCAACCGGTTACGCATCACCAAGCCCGACGCCGCCCTACGCATCGCCGACG CCGCCGATCTCGGACCTCGTCGAGCACTCACCGGCGAACCGCTAGCCCCACAGTTGACCGCCACCGCCACCGCCCAACGC CAGGGCCTGATCGGCGAGGCGCACATCAAAGTGATTCGCGCCCTTTTTCGCCCACCTGCCCGCCGCGGTGGATGTGTCCA CCCGCCAGGCCGCCGAAGCCGACCTGGCCGGCAAAGCCGCTCAATATCGTCCCGACGAGCTGGCCCGCTACGCCCAGCGG GTCATGGACTGGCTACACCCCGACGGCGACCTCACCGACACCGAACGCGCCCGCAAACGCGGCATCACCCTGAGCAACCA GCAATACGACGGCATGTCACGGCTAAGTGGCTACCTGACCCCCCAAGCGCGGGCCACCTTTGA
Upstream 100 bases:
>100_bases TGGCCGCCAGGACTCACCTCCTTGCCTAGGCAGCGCTTTGCTTCACCCGCGGTGTTAGTCGGCCATAACGGGCAGAAAGT TCCCATCGCGCCCAGGAAAG
Downstream 100 bases:
>100_bases AGCCGTGCTAGCCAAACTGGCCGCCCCCGGCGCGACCAACCCCGACGACCACACCCCGGTCATCGACACCACCCCCGATG CGGCCGCCATCGACCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLRSLER LECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALANRLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQR QGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQP AIRRHVTAKWLPDPPSAGHL
Sequences:
>Translated_260_residues MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLRSLER LECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALANRLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQR QGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQP AIRRHVTAKWLPDPPSAGHL >Mature_260_residues MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDAELDRLDEVSFEVLTTPERLRSLER LECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALANRLRITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQR QGLIGEAHIKVIRALFRPPARRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQP AIRRHVTAKWLPDPPSAGHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29035; Mature: 29035
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDAELDR CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHH LDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALANRL HHHHHHHEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHC RITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPA CCCCCCHHEEECCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC RRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQP CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCH AIRRHVTAKWLPDPPSAGHL HHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDAELDR CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHH LDEVSFEVLTTPERLRSLERLECLVRRLPAVGHTLINQLDTQASEEELGGTLCCALANRL HHHHHHHEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHC RITKPDAALRIADAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPA CCCCCCHHEEECCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC RRGGCVHPPGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRHRTRPQTRHHPEQP CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCH AIRRHVTAKWLPDPPSAGHL HHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]