Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636006
Identifier: 121636006
GI number: 121636006
Start: 132556
End: 133404
Strand: Reverse
Name: 121636006
Synonym: BCG_0126c
Alternate gene names: NA
Gene position: 133404-132556 (Counterclockwise)
Preceding gene: 121636007
Following gene: 121635991
Centisome position: 3.05
GC content: 67.73
Gene sequence:
>849_bases GTGCTCGCACAAGCCACAACGGCCGGGAGCTTTAACCACCACGCATCAACCGTTTTGCAAGGCCGCAGGGGTGTGCCCGC GGCGATGTGGTCCGAGCCCGCTGGAGCAATCCGTCGGCATTGCGCGACTATTGATGGCATGGACTGCGAGGTCGCGCGCG AAGCGCTGTCGGCACGACTCGACGGCGAGCGCGCACCGGTGCCCTCGGCGAGAGTCGATGAACACCTGGGCGAGTGCAGC GCCTGTCGCGCATGGTTTACCCAGGTGGCCAGCCAGGCTGGTGATCTGCGTCGGCTCGCCGAGTCCCGCCCGGTTGTCCC GCCTGTTGGGCGCCTCGGGATCCGCCGGGCGCCGCGGCGGCAACATTCACCGATGACCTGGCGACGTTGGGCGTTGCTGT GCGTGGGCATCGCGCAGATCGCCCTGGGCACCGTGCAGGGGTTTGGCCTAGACGTCGGCCTGACCCATCAGCACCCGACG GGTGCCGGCACCCACTTGCTCAACGAGTCCACGTCGTGGTCGATTGCGCTCGGTGTGATCATGGTGGGCGCGGCGCTATG GCCGAGCGCCGCCGCCGGCCTGGCCGGTGTTCTGACGGCGTTCGTCGCCATACTGACCGGCTATGTGATTGTGGATGCGC TGTCCGGCGCGGTCAGCACCACGCGGATTTTGACTCATCTGCCGGTGGTGATCGGCGCGGTCCTGGCAATCATGGTGTGG CGAAGCGCCTCTGGTCCTCGGCCGAGACCGGATGCGGTCGCCGCTGAGCCCGATATCGTGTTGCCCGACAACGCATCACG CGGACGACGGCGCGGTCATTTGTGGCCCACCGACGGTTCCGCAGCCTAG
Upstream 100 bases:
>100_bases CACCACCCCGAACGATTCCTCCACAACCAAGACGACGACGACAAACCCGATTGACCCCTGAACGCGAGCCCCACGGCGCT CACGCACCACCCGGGCCACC
Downstream 100 bases:
>100_bases CGGGTATCGCCCAAATTTGCGCAACCGCAAGCTGTTTGAGACCACGAAGAACGATGAGAACGCCATGGCCGCACCGGCCA CCAGGGGGTTGAGCAGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLAQATTAGSFNHHASTVLQGRRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECS ACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPT GAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVW RSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA
Sequences:
>Translated_282_residues MLAQATTAGSFNHHASTVLQGRRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECS ACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPT GAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVW RSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA >Mature_282_residues MLAQATTAGSFNHHASTVLQGRRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECS ACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPT GAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVW RSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA
Specific function: Unknown
COG id: COG5660
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29684; Mature: 29684
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQATTAGSFNHHASTVLQGRRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARL CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHC DGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRR CCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC QHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHCCCCCHHHHHHHH MVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA HCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLAQATTAGSFNHHASTVLQGRRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARL CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHC DGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRR CCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC QHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHCCCCCHHHHHHHH MVGAALWPSAAAGLAGVLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA HCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]