Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is yfiQ [C]

Identifier: 121610262

GI number: 121610262

Start: 3705818

End: 3707929

Strand: Direct

Name: yfiQ [C]

Synonym: Veis_3321

Alternate gene names: 121610262

Gene position: 3705818-3707929 (Clockwise)

Preceding gene: 121610261

Following gene: 121610264

Centisome position: 66.57

GC content: 70.45

Gene sequence:

>2112_bases
ATGACCGGCCCCGGCCTCGCTGCGGGCGCTCTGGCGCAAGCGCTGCTCCAGCCCCGAAGCATCGCGCTGTACGGGGCCTC
GGACGACCCCGGCAAGATCGCCGGGCGTCCGCTGCAGTTTCTGCAACGCTCGGGCTATGCTGGACGCATCTACCCGATCA
ACCCGGGACGCCCGCAGGTTCAGGGCCTCAAGGCCTGGCCGAGCCTGGATCGGTTGCCCGAGGTGCCAGAGCAGGTCTTT
GTGCTGACGCCCACTGGGCAGGTGCTCGCTGCCGCCCATCGATGCGCTGCGCTGGGGGTGAAACTGATCACCATCCTGGC
CAGCGGTTTTTCCGAATCCGGCCGGGAAGGGCTGCAGCGCGAAGCAGAGCTGCGCGATCTGGCGCGGGCCAGCGGCATGC
GCATCCTTGGCCCGAGCAGCCTGGGGGTGGTCAATCCGCGTGTGGGACTGGTGCTGACCGCCAACGCCGTATTTGCCGAG
CCCGAACTGCCCGTCGGCAAAGTCTTCGTCGCATCGCACAGTGGCAGCATGATCGGTGCGCTGGTCTCGCGCGGCAAGGC
GCGCGCGGTGGGCTTTGCGGGGCTGGTGTCGGTGGGCAGCGAAGCCGACCTGAGCCTGGGAGAAATCTGCCAGGCCACGC
TCGATGACCCGGGCATCGAGGGCTACCTGCTGTTCCTCGAAAGCCTGCGCCATGGCGCCGCGTTGCAGCGGTTCGCGCGC
GCGGCTGCGGCCTGCGGGAAACCCGTCATTGCTTACAAACTGGGCCGCTCGGAGGCCGCTGCGCAGATGGCCGGCACCCA
CACCGGCGCTCTGGCCGGCGCGGACGACATCGCCGACGCATTCCTCAAGGACCTGGGCATCGCCCGCGTGCAGATGCTGG
AGTCCCTGCTCGAAGCCTTGCCGCTCGCGCAGCGCCTGCCGTTGCCGTTATTGCGGCCCGACATGCCGCCGGCCCGCCGG
GTGGGCGTGGTGAGCACCACGGGCGGCGGCGCCGCGATGGTGGTCGATCAACTGGGTGTGCGCGGCCTGCAGGTGCAGTG
CCCTTCCGAGGCCACGCAAGAGCGCCTGAAGGCGGCCGGCATCCCCGGCAACGCCGGGCGCGTGCTCGACCTGACCTTGG
CCGGCACCCGCTACGCCGTGATGAAGGCGGCGCTGCAGATCCTGCTCGACGCGCCCGAGTTCGACATGCTGATCGCCGTG
CTCGGCTCCTCGGCGCGCTTGCAGCCGCAGTTGGCGCTCCAGCCGATCCTGGACAGCGCCAGCCATCGCAAGCCGCTGAT
GGCCATGCTGCTGCCCGATGCGCCGCAAGCGCTGGCGCAGCTAAGCCGGGCCGCCGTGCCCTGCTTTCGCACCCCGGAGG
GCTGTGCCGACGTGCTGGCCGCAGTGCTGGCGCGGCGCTCGCCCGGGGCGCCGGCCTGCCCGGACCATGGCGGCGCCGGC
GCCGCGTTCATCGACGAGGCGCAGTCCTATGCCGTGCTCGACGAACTGCAACTGCCCCATGCGCCCGTGCTCACCGCAGC
GCTGGCCGGCCCGGTGCCCGGGGTGCTGCCGTTCCCGTTCCCGGTGGCGGTCAAGCTGTGTTCAGCGCAGATTCTTCACA
AGACCGAAGTCGGTGGCGTGGTGCTGGGGGTGGATTCGGCCCAGGCGCTGTCGGAGGCTTTCGCCACCCTGCGCCAGCGG
CTGACAGAGCGCTTGCCCGGCGTGCCGTGCGAGCAGGTGCTGCTGCAGCCCATGTGCCAGGGATTGATCGAGGTGCTGCT
GGGCTATCGCGTCGATCCGGATGCCGGCCTCATCGTGCTGCTGGCGGCCGGGGGCATCTGGGCGGAACTGGTGCGCGAGC
GCAGCATCCGCCTGGCACCCGTTGGCATCGGCAGCGCCTGGGAGATGATCGGCGAGGTCCGGGCGCTGCAGACCGTGGCC
GGCCTGCGTGGGCAACCCAAGGGCGACCTGGCCGCATTGGCGCAGGCCATCTCGGACTTGTCGCAACTGGCGCTGCGCCC
GGAACTGGGCGTGGTGCAGGCCGAGATGAACCCGATGCTGGTGCTCAGGGAGGGCCAAGGCGTGCTGGCGCTCGACGCTG
TCGTCATGCGCAAGGACTGGGTTGGCCCATGA

Upstream 100 bases:

>100_bases
CGCTGGTCATTGGCAACAGCCCGCAAGAGTTCAGGGACGAAATCCGCCAGGAGGTCGCTGCCTGGGCCGCACAGTTCAAG
CACCTCGGCAGGGCGCTGCA

Downstream 100 bases:

>100_bases
ATAGTCGCGCTTTTCCTGGAAACGCGGCGCGACGGAACAGCCACTGAACCAGTTCGCGCTTCCTGGTTCCAGCTATCGGT
GCGCGAAGCCTGGGGGTGCG

Product: CoA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 703; Mature: 702

Protein sequence:

>703_residues
MTGPGLAAGALAQALLQPRSIALYGASDDPGKIAGRPLQFLQRSGYAGRIYPINPGRPQVQGLKAWPSLDRLPEVPEQVF
VLTPTGQVLAAAHRCAALGVKLITILASGFSESGREGLQREAELRDLARASGMRILGPSSLGVVNPRVGLVLTANAVFAE
PELPVGKVFVASHSGSMIGALVSRGKARAVGFAGLVSVGSEADLSLGEICQATLDDPGIEGYLLFLESLRHGAALQRFAR
AAAACGKPVIAYKLGRSEAAAQMAGTHTGALAGADDIADAFLKDLGIARVQMLESLLEALPLAQRLPLPLLRPDMPPARR
VGVVSTTGGGAAMVVDQLGVRGLQVQCPSEATQERLKAAGIPGNAGRVLDLTLAGTRYAVMKAALQILLDAPEFDMLIAV
LGSSARLQPQLALQPILDSASHRKPLMAMLLPDAPQALAQLSRAAVPCFRTPEGCADVLAAVLARRSPGAPACPDHGGAG
AAFIDEAQSYAVLDELQLPHAPVLTAALAGPVPGVLPFPFPVAVKLCSAQILHKTEVGGVVLGVDSAQALSEAFATLRQR
LTERLPGVPCEQVLLQPMCQGLIEVLLGYRVDPDAGLIVLLAAGGIWAELVRERSIRLAPVGIGSAWEMIGEVRALQTVA
GLRGQPKGDLAALAQAISDLSQLALRPELGVVQAEMNPMLVLREGQGVLALDAVVMRKDWVGP

Sequences:

>Translated_703_residues
MTGPGLAAGALAQALLQPRSIALYGASDDPGKIAGRPLQFLQRSGYAGRIYPINPGRPQVQGLKAWPSLDRLPEVPEQVF
VLTPTGQVLAAAHRCAALGVKLITILASGFSESGREGLQREAELRDLARASGMRILGPSSLGVVNPRVGLVLTANAVFAE
PELPVGKVFVASHSGSMIGALVSRGKARAVGFAGLVSVGSEADLSLGEICQATLDDPGIEGYLLFLESLRHGAALQRFAR
AAAACGKPVIAYKLGRSEAAAQMAGTHTGALAGADDIADAFLKDLGIARVQMLESLLEALPLAQRLPLPLLRPDMPPARR
VGVVSTTGGGAAMVVDQLGVRGLQVQCPSEATQERLKAAGIPGNAGRVLDLTLAGTRYAVMKAALQILLDAPEFDMLIAV
LGSSARLQPQLALQPILDSASHRKPLMAMLLPDAPQALAQLSRAAVPCFRTPEGCADVLAAVLARRSPGAPACPDHGGAG
AAFIDEAQSYAVLDELQLPHAPVLTAALAGPVPGVLPFPFPVAVKLCSAQILHKTEVGGVVLGVDSAQALSEAFATLRQR
LTERLPGVPCEQVLLQPMCQGLIEVLLGYRVDPDAGLIVLLAAGGIWAELVRERSIRLAPVGIGSAWEMIGEVRALQTVA
GLRGQPKGDLAALAQAISDLSQLALRPELGVVQAEMNPMLVLREGQGVLALDAVVMRKDWVGP
>Mature_702_residues
TGPGLAAGALAQALLQPRSIALYGASDDPGKIAGRPLQFLQRSGYAGRIYPINPGRPQVQGLKAWPSLDRLPEVPEQVFV
LTPTGQVLAAAHRCAALGVKLITILASGFSESGREGLQREAELRDLARASGMRILGPSSLGVVNPRVGLVLTANAVFAEP
ELPVGKVFVASHSGSMIGALVSRGKARAVGFAGLVSVGSEADLSLGEICQATLDDPGIEGYLLFLESLRHGAALQRFARA
AAACGKPVIAYKLGRSEAAAQMAGTHTGALAGADDIADAFLKDLGIARVQMLESLLEALPLAQRLPLPLLRPDMPPARRV
GVVSTTGGGAAMVVDQLGVRGLQVQCPSEATQERLKAAGIPGNAGRVLDLTLAGTRYAVMKAALQILLDAPEFDMLIAVL
GSSARLQPQLALQPILDSASHRKPLMAMLLPDAPQALAQLSRAAVPCFRTPEGCADVLAAVLARRSPGAPACPDHGGAGA
AFIDEAQSYAVLDELQLPHAPVLTAALAGPVPGVLPFPFPVAVKLCSAQILHKTEVGGVVLGVDSAQALSEAFATLRQRL
TERLPGVPCEQVLLQPMCQGLIEVLLGYRVDPDAGLIVLLAAGGIWAELVRERSIRLAPVGIGSAWEMIGEVRALQTVAG
LRGQPKGDLAALAQAISDLSQLALRPELGVVQAEMNPMLVLREGQGVLALDAVVMRKDWVGP

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=719, Percent_Identity=26.4255910987483, Blast_Score=166, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 73043; Mature: 72912

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPGLAAGALAQALLQPRSIALYGASDDPGKIAGRPLQFLQRSGYAGRIYPINPGRPQV
CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCC
QGLKAWPSLDRLPEVPEQVFVLTPTGQVLAAAHRCAALGVKLITILASGFSESGREGLQR
CCCCCCCCHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EAELRDLARASGMRILGPSSLGVVNPRVGLVLTANAVFAEPELPVGKVFVASHSGSMIGA
HHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECEEEECCCCCCCEEEEEECCCCHHHH
LVSRGKARAVGFAGLVSVGSEADLSLGEICQATLDDPGIEGYLLFLESLRHGAALQRFAR
HHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AAAACGKPVIAYKLGRSEAAAQMAGTHTGALAGADDIADAFLKDLGIARVQMLESLLEAL
HHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLAQRLPLPLLRPDMPPARRVGVVSTTGGGAAMVVDQLGVRGLQVQCPSEATQERLKAAG
CHHHHCCCCCCCCCCCHHHCEEEEEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCC
IPGNAGRVLDLTLAGTRYAVMKAALQILLDAPEFDMLIAVLGSSARLQPQLALQPILDSA
CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC
SHRKPLMAMLLPDAPQALAQLSRAAVPCFRTPEGCADVLAAVLARRSPGAPACPDHGGAG
CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AAFIDEAQSYAVLDELQLPHAPVLTAALAGPVPGVLPFPFPVAVKLCSAQILHKTEVGGV
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
VLGVDSAQALSEAFATLRQRLTERLPGVPCEQVLLQPMCQGLIEVLLGYRVDPDAGLIVL
EEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
LAAGGIWAELVRERSIRLAPVGIGSAWEMIGEVRALQTVAGLRGQPKGDLAALAQAISDL
EECCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SQLALRPELGVVQAEMNPMLVLREGQGVLALDAVVMRKDWVGP
HHHHCCCCCCEEEECCCCEEEEECCCCEEEHHHHHHHHCCCCC
>Mature Secondary Structure 
TGPGLAAGALAQALLQPRSIALYGASDDPGKIAGRPLQFLQRSGYAGRIYPINPGRPQV
CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCC
QGLKAWPSLDRLPEVPEQVFVLTPTGQVLAAAHRCAALGVKLITILASGFSESGREGLQR
CCCCCCCCHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EAELRDLARASGMRILGPSSLGVVNPRVGLVLTANAVFAEPELPVGKVFVASHSGSMIGA
HHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECEEEECCCCCCCEEEEEECCCCHHHH
LVSRGKARAVGFAGLVSVGSEADLSLGEICQATLDDPGIEGYLLFLESLRHGAALQRFAR
HHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AAAACGKPVIAYKLGRSEAAAQMAGTHTGALAGADDIADAFLKDLGIARVQMLESLLEAL
HHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLAQRLPLPLLRPDMPPARRVGVVSTTGGGAAMVVDQLGVRGLQVQCPSEATQERLKAAG
CHHHHCCCCCCCCCCCHHHCEEEEEECCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCC
IPGNAGRVLDLTLAGTRYAVMKAALQILLDAPEFDMLIAVLGSSARLQPQLALQPILDSA
CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC
SHRKPLMAMLLPDAPQALAQLSRAAVPCFRTPEGCADVLAAVLARRSPGAPACPDHGGAG
CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AAFIDEAQSYAVLDELQLPHAPVLTAALAGPVPGVLPFPFPVAVKLCSAQILHKTEVGGV
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
VLGVDSAQALSEAFATLRQRLTERLPGVPCEQVLLQPMCQGLIEVLLGYRVDPDAGLIVL
EEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
LAAGGIWAELVRERSIRLAPVGIGSAWEMIGEVRALQTVAGLRGQPKGDLAALAQAISDL
EECCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SQLALRPELGVVQAEMNPMLVLREGQGVLALDAVVMRKDWVGP
HHHHCCCCCCEEEECCCCEEEEECCCCEEEHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]