| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610261
Identifier: 121610261
GI number: 121610261
Start: 3704862
End: 3705821
Strand: Direct
Name: 121610261
Synonym: Veis_3320
Alternate gene names: NA
Gene position: 3704862-3705821 (Clockwise)
Preceding gene: 121610260
Following gene: 121610262
Centisome position: 66.55
GC content: 67.4
Gene sequence:
>960_bases ATGCAGCGTCGTCATTTTTTGCTGGCTGCCATGGCGCCGCTGGCGTTCGGCAGCGCCGCCGCCCCGGCCTACCCGGGCCG GCCGGTGCGCATCATCGTTGGCTACTCGGCCGGCGGCCCCACGGACCAGGTGGCCCGCATGGTGGCGGCCAAGCTGCAGG AGCGGTTCGGCCAAGCCTTCATCGTTGAAAACCGCGCCGGCGTAGGCTCGAACATCGCTTCCGAAGCCGTGGCTGCGGCA CCCGCCGATGGCCATACCCTGCTGCTGGCCGCAGCGCCGATCACGATGAACCGCTTCGTCTACCAGGGCCAGAAGTTCGA CGCCGAAAAGAGCTTCGATCCAATCTCCAAGCTGTCTTCGGCACCGGGCGTTCTGGCCGTGCGCCCCGGTCTTGCCGTGA ACACGGTGGCCGAGTTGATCGCGCTGGCCAAGTCATCGGGCGGCATCAGCTACGGCTCGACCGGCCTGGGCGGCTCCCAA CACATGGCCGCCGAACTGCTGCAGCGCCTGACGGGCATGGCGCTCACGCATGTGCCCTACAAGGGAGCCAGCGGCGTGCT GTCGGACCTGATCGCCGGGCATATCGACATGGCGTTCATGACCGCCACCAGTGCCATGCCCAACCTGCAGGCCGGCAAGA TCAAACCGCTGGCCATCGCCGGCCCCAGGCGCCTGAGCGGACTGCCCCAGGTGCCGACCTTCGCCGAGTCCGGCCTGCCG GACATGGTGTCCGATTCCTGGAATGGCCTGCTGGCACCGGCCGGAACGCCGGCGCGCATCATCAGCCAGTTGCACGAGGC GGCGGTAGCCGCCATCAACGCGCCCGATGTCAAAGACAAGCTGCAATCGCAGGGCGCGCTGGTCATTGGCAACAGCCCGC AAGAGTTCAGGGACGAAATCCGCCAGGAGGTCGCTGCCTGGGCCGCACAGTTCAAGCACCTCGGCAGGGCGCTGCAATGA
Upstream 100 bases:
>100_bases CGCATCGCCGAAGGGATTTTTGCCAGGGCTTTTCCGCAGCGCGCGGCCAGGCCATGAGGCCCCCTTTCGTGTGTTCGACC TTCCCAACGGAGACCCCACC
Downstream 100 bases:
>100_bases CCGGCCCCGGCCTCGCTGCGGGCGCTCTGGCGCAAGCGCTGCTCCAGCCCCGAAGCATCGCGCTGTACGGGGCCTCGGAC GACCCCGGCAAGATCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MQRRHFLLAAMAPLAFGSAAAPAYPGRPVRIIVGYSAGGPTDQVARMVAAKLQERFGQAFIVENRAGVGSNIASEAVAAA PADGHTLLLAAAPITMNRFVYQGQKFDAEKSFDPISKLSSAPGVLAVRPGLAVNTVAELIALAKSSGGISYGSTGLGGSQ HMAAELLQRLTGMALTHVPYKGASGVLSDLIAGHIDMAFMTATSAMPNLQAGKIKPLAIAGPRRLSGLPQVPTFAESGLP DMVSDSWNGLLAPAGTPARIISQLHEAAVAAINAPDVKDKLQSQGALVIGNSPQEFRDEIRQEVAAWAAQFKHLGRALQ
Sequences:
>Translated_319_residues MQRRHFLLAAMAPLAFGSAAAPAYPGRPVRIIVGYSAGGPTDQVARMVAAKLQERFGQAFIVENRAGVGSNIASEAVAAA PADGHTLLLAAAPITMNRFVYQGQKFDAEKSFDPISKLSSAPGVLAVRPGLAVNTVAELIALAKSSGGISYGSTGLGGSQ HMAAELLQRLTGMALTHVPYKGASGVLSDLIAGHIDMAFMTATSAMPNLQAGKIKPLAIAGPRRLSGLPQVPTFAESGLP DMVSDSWNGLLAPAGTPARIISQLHEAAVAAINAPDVKDKLQSQGALVIGNSPQEFRDEIRQEVAAWAAQFKHLGRALQ >Mature_319_residues MQRRHFLLAAMAPLAFGSAAAPAYPGRPVRIIVGYSAGGPTDQVARMVAAKLQERFGQAFIVENRAGVGSNIASEAVAAA PADGHTLLLAAAPITMNRFVYQGQKFDAEKSFDPISKLSSAPGVLAVRPGLAVNTVAELIALAKSSGGISYGSTGLGGSQ HMAAELLQRLTGMALTHVPYKGASGVLSDLIAGHIDMAFMTATSAMPNLQAGKIKPLAIAGPRRLSGLPQVPTFAESGLP DMVSDSWNGLLAPAGTPARIISQLHEAAVAAINAPDVKDKLQSQGALVIGNSPQEFRDEIRQEVAAWAAQFKHLGRALQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33101; Mature: 33101
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRHFLLAAMAPLAFGSAAAPAYPGRPVRIIVGYSAGGPTDQVARMVAAKLQERFGQAF CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEE IVENRAGVGSNIASEAVAAAPADGHTLLLAAAPITMNRFVYQGQKFDAEKSFDPISKLSS EEECCCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHCC APGVLAVRPGLAVNTVAELIALAKSSGGISYGSTGLGGSQHMAAELLQRLTGMALTHVPY CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC KGASGVLSDLIAGHIDMAFMTATSAMPNLQAGKIKPLAIAGPRRLSGLPQVPTFAESGLP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCCCCCCHHHCCCC DMVSDSWNGLLAPAGTPARIISQLHEAAVAAINAPDVKDKLQSQGALVIGNSPQEFRDEI HHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCHHHHHHH RQEVAAWAAQFKHLGRALQ HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQRRHFLLAAMAPLAFGSAAAPAYPGRPVRIIVGYSAGGPTDQVARMVAAKLQERFGQAF CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEE IVENRAGVGSNIASEAVAAAPADGHTLLLAAAPITMNRFVYQGQKFDAEKSFDPISKLSS EEECCCCCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHCC APGVLAVRPGLAVNTVAELIALAKSSGGISYGSTGLGGSQHMAAELLQRLTGMALTHVPY CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC KGASGVLSDLIAGHIDMAFMTATSAMPNLQAGKIKPLAIAGPRRLSGLPQVPTFAESGLP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHCCCCCCCCHHHCCCC DMVSDSWNGLLAPAGTPARIISQLHEAAVAAINAPDVKDKLQSQGALVIGNSPQEFRDEI HHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCHHHHHHH RQEVAAWAAQFKHLGRALQ HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]