Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is ykgA [H]

Identifier: 121610135

GI number: 121610135

Start: 3560542

End: 3561456

Strand: Direct

Name: ykgA [H]

Synonym: Veis_3194

Alternate gene names: 121610135

Gene position: 3560542-3561456 (Clockwise)

Preceding gene: 121610133

Following gene: 121610136

Centisome position: 63.96

GC content: 59.67

Gene sequence:

>915_bases
ATGACGTTCAATCTCAGAAATCGGCGTGAGGATGGCAGCACGCCGGTGCTCGATACATGGGGTGCCAATAGCGACTATGG
ATTGCTGCGCGACGTGCTGCTTGGCCCGGCCGAAAATTACCAGTGGCTCGAGACGAGCTCGCTGTCGAAGAAGAGTCTGC
GCACTGGCCTGCGTTTCGATGCAGACGTAGCGTGCCGACAACATGCGGAGATGGTCGACGCCTATCGTTCGGCGGGCGTG
ACGGTGCATTTCCATGCGGCGGATCCCGAACTGCCTTATCAGATTTTTGCCCGGGATTCGTCCGTCATGACGCCCTACGG
TGCGGTGATCACCAATATGGCTCAGTGGTGGAGACGCGGGGAGAACTTCCGCGCGATCGAGACATATCAGCGGCTCGGTA
TCCCGATCTACGACTACGTCACCGCCGGCACGTTCGAAGGCGGCGACTTCGACATCATCGAACCGGACTGCGTGCTGATC
GGCTGGGAGGGCGTCGAGGGCCGCTCGCAGGAGCAAGGCGCGCTGCAACTCAAAAGATGGTTCGAGAAGGAGGGCTGGGA
AGTGCGCTTGTGCGGCATCGACCCGTATTACGTTCACATCGATCTGATGGTCGTGATGCTGGCGCCCAAACTCGCTGCGG
TATGTCTCGAAACGATCGATCCAGGCGTCGTCGACTGGTTGCAGGGCAAGGGCATCGAGATCGTCGCCGTGCCGTTCAAG
GACACGATGATGCTCGGCTGCAATGTCGTCGCGCTTGGCAGCGACCGTGTGCTGTTGCCCAACAGCAGTCACTTTCTGAA
GGAGCGTTTGAAAGCCCTTGGCTTGCAGGTCTACGACCCTGAGATCGACATGATCGCGAATGGCGGTGGCGGCGTGCACT
GCATGTGCCAGCCTTTGCGGCGTGATCCTGTTTGA

Upstream 100 bases:

>100_bases
CGTGTTCGTTGGAACGGGTCAAAGCACTCCAAACCACTTTGGGCCCTGGCCTGAAGCTGAATGCGAAATATGTTCAACCC
ATCCGTGAGGAATATCACAC

Downstream 100 bases:

>100_bases
CGGCAAGCGGTAGCACGCATCCTCATCGACGGAGGGCGGTCTCGATTGCTGGCGCGCAGGCGCCCGCGCACCTGCCCGAA
GGCCGGTCTGCCGGGGCGCT

Product: amidinotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTFNLRNRREDGSTPVLDTWGANSDYGLLRDVLLGPAENYQWLETSSLSKKSLRTGLRFDADVACRQHAEMVDAYRSAGV
TVHFHAADPELPYQIFARDSSVMTPYGAVITNMAQWWRRGENFRAIETYQRLGIPIYDYVTAGTFEGGDFDIIEPDCVLI
GWEGVEGRSQEQGALQLKRWFEKEGWEVRLCGIDPYYVHIDLMVVMLAPKLAAVCLETIDPGVVDWLQGKGIEIVAVPFK
DTMMLGCNVVALGSDRVLLPNSSHFLKERLKALGLQVYDPEIDMIANGGGGVHCMCQPLRRDPV

Sequences:

>Translated_304_residues
MTFNLRNRREDGSTPVLDTWGANSDYGLLRDVLLGPAENYQWLETSSLSKKSLRTGLRFDADVACRQHAEMVDAYRSAGV
TVHFHAADPELPYQIFARDSSVMTPYGAVITNMAQWWRRGENFRAIETYQRLGIPIYDYVTAGTFEGGDFDIIEPDCVLI
GWEGVEGRSQEQGALQLKRWFEKEGWEVRLCGIDPYYVHIDLMVVMLAPKLAAVCLETIDPGVVDWLQGKGIEIVAVPFK
DTMMLGCNVVALGSDRVLLPNSSHFLKERLKALGLQVYDPEIDMIANGGGGVHCMCQPLRRDPV
>Mature_303_residues
TFNLRNRREDGSTPVLDTWGANSDYGLLRDVLLGPAENYQWLETSSLSKKSLRTGLRFDADVACRQHAEMVDAYRSAGVT
VHFHAADPELPYQIFARDSSVMTPYGAVITNMAQWWRRGENFRAIETYQRLGIPIYDYVTAGTFEGGDFDIIEPDCVLIG
WEGVEGRSQEQGALQLKRWFEKEGWEVRLCGIDPYYVHIDLMVVMLAPKLAAVCLETIDPGVVDWLQGKGIEIVAVPFKD
TMMLGCNVVALGSDRVLLPNSSHFLKERLKALGLQVYDPEIDMIANGGGGVHCMCQPLRRDPV

Specific function: Unknown

COG id: COG1834

COG function: function code E; N-Dimethylarginine dimethylaminohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DDAH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003198 [H]

Pfam domain/function: PF02274 Amidinotransf [H]

EC number: NA

Molecular weight: Translated: 34064; Mature: 33933

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNLRNRREDGSTPVLDTWGANSDYGLLRDVLLGPAENYQWLETSSLSKKSLRTGLRFD
CCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCCCC
ADVACRQHAEMVDAYRSAGVTVHFHAADPELPYQIFARDSSVMTPYGAVITNMAQWWRRG
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
ENFRAIETYQRLGIPIYDYVTAGTFEGGDFDIIEPDCVLIGWEGVEGRSQEQGALQLKRW
CCCHHHHHHHHCCCCHHHHEECCCCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHH
FEKEGWEVRLCGIDPYYVHIDLMVVMLAPKLAAVCLETIDPGVVDWLQGKGIEIVAVPFK
HHCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCC
DTMMLGCNVVALGSDRVLLPNSSHFLKERLKALGLQVYDPEIDMIANGGGGVHCMCQPLR
CEEEECCEEEEECCCEEECCCCHHHHHHHHHHCCCEEECCCEEEEECCCCCEEEEEECCC
RDPV
CCCC
>Mature Secondary Structure 
TFNLRNRREDGSTPVLDTWGANSDYGLLRDVLLGPAENYQWLETSSLSKKSLRTGLRFD
CCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHCCCCC
ADVACRQHAEMVDAYRSAGVTVHFHAADPELPYQIFARDSSVMTPYGAVITNMAQWWRRG
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC
ENFRAIETYQRLGIPIYDYVTAGTFEGGDFDIIEPDCVLIGWEGVEGRSQEQGALQLKRW
CCCHHHHHHHHCCCCHHHHEECCCCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHH
FEKEGWEVRLCGIDPYYVHIDLMVVMLAPKLAAVCLETIDPGVVDWLQGKGIEIVAVPFK
HHCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCC
DTMMLGCNVVALGSDRVLLPNSSHFLKERLKALGLQVYDPEIDMIANGGGGVHCMCQPLR
CEEEECCEEEEECCCEEECCCCHHHHHHHHHHCCCEEECCCEEEEECCCCCEEEEEECCC
RDPV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]