| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610077
Identifier: 121610077
GI number: 121610077
Start: 3484432
End: 3485844
Strand: Direct
Name: 121610077
Synonym: Veis_3135
Alternate gene names: NA
Gene position: 3484432-3485844 (Clockwise)
Preceding gene: 121610076
Following gene: 121610080
Centisome position: 62.59
GC content: 68.72
Gene sequence:
>1413_bases ATGTTCGAAGGCATGGATGTGCCAGCAGCGAGTGCTGGCGCGCCAATGCACCCTTGTAGCGCACCGCCAGCCAGTGCCCC GGCACGCGTGCAGGAGCCCAACCGTTTGCAAGTGGAGCTGCGCGCATCCGACCTGGATTCGCTGCTGCCTGCAGACCATC GGGCCCGACTGGTGTGGCGCTACGTGGAGCAGCAGGATCTGAGCGTGCTGTTCGATGCCATCCGGGCCCGAGGTTCGGCG CCTGGGCGCCGGGCCATTGATCCACGCATCCTGTTCTCGCTGTGGCTGTACGCCACGCTGGATGGCGTCGGCAGCGGGCG CGAGGTCGCCCGGTTGAGCCAAAGCCACGACGCGTACCGCTGGATCTGTGGTGGTGTGTCGGTGAACTACCACGCGCTCA ATGACTTTCGGGTGGGCAACGAGGCGCTGATGGACCGCCTGCTCAGCCACAACGTGGCCGCGCTGGCTGCCGTCGGGGTG ATCCGGCTGGTGCGTGTGGCGCAAGACGGCATGCGGGTACGCGCCAGCGCCGGGGCGGCCTCGTTTCGGCGCAAGGGCAC GCTCAAGGAGCACCATGCCAAGGCCACCGAGATGGTGCACTCGCTCAAGGAGCAAGCCCGCGAGAACCCGGGGCAGGCCG AGCGACGGGCACAGGCGGCCAGGCTGCGGGCAGCCGAGCTGCGCGAGCAGCAACTGGCCGCGGCACTGGCGCGGCTGCCC GAGTTGGAGGCAATCAAGCAGCGCAATGGCCAGCCGATCGACAAGGCGCGTGCCAGCACGACAGATGCCGATGCCAGCAA CATGAAGATGGCCGACGGCGGCTGGCGCCCGGCCTACAACGTGCAACTGGCCACCGACTGCGCCAGCCAGGTGATCGTGG GCGTGGACACCGTCACCGCCGGCAGCGACATGGCCCAGTTGGCGCCCATGGTCCAACAAGTGCACCAGCGCGTGGGCAAG GCGGCCGAACAATGGCTGGTCGACGGCGGCTTGCCAGCGCACGGCCAACTGGACGCGGTGGCCGACAAGACCGAGGTCTA TGCGCCGGTGCCCCAAGCCAGGGCACCCAAGGGAAAGAGCCAAGGCCAGGACGACGAGCAGCAGCCGCCCGCACCGGGCA GCCAGTTCCAACCCAAGGCCGGCGACAGCACAGCCGTGGCGCAGTGGCGCCAGCGCATGAGCACCGATGAGGCCCGCGAG ATCTACAAGGATCGGGCGGCCACGGCCGAATGCGTGAACGCGCAGGCGCGCAACCGCGGCCTGCTGCGCATGCCCGTGCG CGGACTGGCCAAGGTCAAGTGCATTGCCTGGTGGTATGCCCTGGCACACAACCTGATGAGGACGGTGGCGCTGGCGCCGC AGCTCATCGGCTGGGGCACAGGTGCGTGCGCAGGTGCGGCAGCGCTGACTTGA
Upstream 100 bases:
>100_bases TTGAGAGTTTTTCCCCGCTGACCGTTGGGAAGTGGCCCGAGACTGGCTTGGGCAAGGTATGACGTCAAGCCAGCGCTCCG CGATGCCCCAGGATCAGGCC
Downstream 100 bases:
>100_bases GGGCCCTGCGCGCCAGGATCAATGCGCCGCAAGGCCATGGTGAGCGACCTGCAACGCTCAAAGCCAACGTACCCGCCGCA CTGTGGCTACCTCACTCGCG
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MFEGMDVPAASAGAPMHPCSAPPASAPARVQEPNRLQVELRASDLDSLLPADHRARLVWRYVEQQDLSVLFDAIRARGSA PGRRAIDPRILFSLWLYATLDGVGSGREVARLSQSHDAYRWICGGVSVNYHALNDFRVGNEALMDRLLSHNVAALAAVGV IRLVRVAQDGMRVRASAGAASFRRKGTLKEHHAKATEMVHSLKEQARENPGQAERRAQAARLRAAELREQQLAAALARLP ELEAIKQRNGQPIDKARASTTDADASNMKMADGGWRPAYNVQLATDCASQVIVGVDTVTAGSDMAQLAPMVQQVHQRVGK AAEQWLVDGGLPAHGQLDAVADKTEVYAPVPQARAPKGKSQGQDDEQQPPAPGSQFQPKAGDSTAVAQWRQRMSTDEARE IYKDRAATAECVNAQARNRGLLRMPVRGLAKVKCIAWWYALAHNLMRTVALAPQLIGWGTGACAGAAALT
Sequences:
>Translated_470_residues MFEGMDVPAASAGAPMHPCSAPPASAPARVQEPNRLQVELRASDLDSLLPADHRARLVWRYVEQQDLSVLFDAIRARGSA PGRRAIDPRILFSLWLYATLDGVGSGREVARLSQSHDAYRWICGGVSVNYHALNDFRVGNEALMDRLLSHNVAALAAVGV IRLVRVAQDGMRVRASAGAASFRRKGTLKEHHAKATEMVHSLKEQARENPGQAERRAQAARLRAAELREQQLAAALARLP ELEAIKQRNGQPIDKARASTTDADASNMKMADGGWRPAYNVQLATDCASQVIVGVDTVTAGSDMAQLAPMVQQVHQRVGK AAEQWLVDGGLPAHGQLDAVADKTEVYAPVPQARAPKGKSQGQDDEQQPPAPGSQFQPKAGDSTAVAQWRQRMSTDEARE IYKDRAATAECVNAQARNRGLLRMPVRGLAKVKCIAWWYALAHNLMRTVALAPQLIGWGTGACAGAAALT >Mature_470_residues MFEGMDVPAASAGAPMHPCSAPPASAPARVQEPNRLQVELRASDLDSLLPADHRARLVWRYVEQQDLSVLFDAIRARGSA PGRRAIDPRILFSLWLYATLDGVGSGREVARLSQSHDAYRWICGGVSVNYHALNDFRVGNEALMDRLLSHNVAALAAVGV IRLVRVAQDGMRVRASAGAASFRRKGTLKEHHAKATEMVHSLKEQARENPGQAERRAQAARLRAAELREQQLAAALARLP ELEAIKQRNGQPIDKARASTTDADASNMKMADGGWRPAYNVQLATDCASQVIVGVDTVTAGSDMAQLAPMVQQVHQRVGK AAEQWLVDGGLPAHGQLDAVADKTEVYAPVPQARAPKGKSQGQDDEQQPPAPGSQFQPKAGDSTAVAQWRQRMSTDEARE IYKDRAATAECVNAQARNRGLLRMPVRGLAKVKCIAWWYALAHNLMRTVALAPQLIGWGTGACAGAAALT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50757; Mature: 50757
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEGMDVPAASAGAPMHPCSAPPASAPARVQEPNRLQVELRASDLDSLLPADHRARLVWR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHH YVEQQDLSVLFDAIRARGSAPGRRAIDPRILFSLWLYATLDGVGSGREVARLSQSHDAYR HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCE WICGGVSVNYHALNDFRVGNEALMDRLLSHNVAALAAVGVIRLVRVAQDGMRVRASAGAA EEECCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCHH SFRRKGTLKEHHAKATEMVHSLKEQARENPGQAERRAQAARLRAAELREQQLAAALARLP HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ELEAIKQRNGQPIDKARASTTDADASNMKMADGGWRPAYNVQLATDCASQVIVGVDTVTA HHHHHHHCCCCCHHHHHCCCCCCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCC GSDMAQLAPMVQQVHQRVGKAAEQWLVDGGLPAHGQLDAVADKTEVYAPVPQARAPKGKS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHCCCCCCCCCCCCCC QGQDDEQQPPAPGSQFQPKAGDSTAVAQWRQRMSTDEAREIYKDRAATAECVNAQARNRG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC LLRMPVRGLAKVKCIAWWYALAHNLMRTVALAPQLIGWGTGACAGAAALT EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCC >Mature Secondary Structure MFEGMDVPAASAGAPMHPCSAPPASAPARVQEPNRLQVELRASDLDSLLPADHRARLVWR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHH YVEQQDLSVLFDAIRARGSAPGRRAIDPRILFSLWLYATLDGVGSGREVARLSQSHDAYR HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCE WICGGVSVNYHALNDFRVGNEALMDRLLSHNVAALAAVGVIRLVRVAQDGMRVRASAGAA EEECCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCHH SFRRKGTLKEHHAKATEMVHSLKEQARENPGQAERRAQAARLRAAELREQQLAAALARLP HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ELEAIKQRNGQPIDKARASTTDADASNMKMADGGWRPAYNVQLATDCASQVIVGVDTVTA HHHHHHHCCCCCHHHHHCCCCCCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCC GSDMAQLAPMVQQVHQRVGKAAEQWLVDGGLPAHGQLDAVADKTEVYAPVPQARAPKGKS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHCCCCCCCCCCCCCC QGQDDEQQPPAPGSQFQPKAGDSTAVAQWRQRMSTDEAREIYKDRAATAECVNAQARNRG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC LLRMPVRGLAKVKCIAWWYALAHNLMRTVALAPQLIGWGTGACAGAAALT EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA