| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610076
Identifier: 121610076
GI number: 121610076
Start: 3483775
End: 3484179
Strand: Direct
Name: 121610076
Synonym: Veis_3134
Alternate gene names: NA
Gene position: 3483775-3484179 (Clockwise)
Preceding gene: 121610075
Following gene: 121610077
Centisome position: 62.58
GC content: 57.78
Gene sequence:
>405_bases ATGAACACGGCCCGCTATTCCAATCTCAACCCGGAAAAGGCGCTGATCTGGCGCATTGTCCACCGCGACAACCTGCCGTG GATTTTGCGCAATGGCCTGTACTCCAAGAATTCGCCCAAGCAAGACCCGCGTTATGTAGTTGTCGCATCCCGGACGATCA TATGGCCTCTTGTGAAACAGATGCGGGTGCTGCTGATGCCACTCTTGCATCGGCTGACCAAGCCCAGGACGCCGAGAACC AACGGCATGGTCGAGAGGTTCAATGGTCGCATAGCGGATGTCCTGAAGACCCACAGGTTCGACAGCCGCGAGGACATGGA GCAGACCTTGCGCGCTATGTGGCCTTGTACAACCACCAACTGCCGCAGTCAGCGCTGGGCAGCAAGACGCCTATGCAGGC CATGA
Upstream 100 bases:
>100_bases ACCGGCAGATTGGCGATGCTGTGCCGGATGCCTTGCGCAGCTACGACATCGTGCCGATTGCGTGGAGCAAGCGTGAAGAA TTTAGAGAGCGACTGGCGGC
Downstream 100 bases:
>100_bases AAGAGTGGCATCAGCAGCACCCGCATCTGTTTCACAAGAGGCCATATGATCGTCCGGGATGCGACAGCTATTCAATTGAC AAAGACGGAATCAAACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; Integrase
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MNTARYSNLNPEKALIWRIVHRDNLPWILRNGLYSKNSPKQDPRYVVVASRTIIWPLVKQMRVLLMPLLHRLTKPRTPRT NGMVERFNGRIADVLKTHRFDSREDMEQTLRAMWPCTTTNCRSQRWAARRLCRP
Sequences:
>Translated_134_residues MNTARYSNLNPEKALIWRIVHRDNLPWILRNGLYSKNSPKQDPRYVVVASRTIIWPLVKQMRVLLMPLLHRLTKPRTPRT NGMVERFNGRIADVLKTHRFDSREDMEQTLRAMWPCTTTNCRSQRWAARRLCRP >Mature_134_residues MNTARYSNLNPEKALIWRIVHRDNLPWILRNGLYSKNSPKQDPRYVVVASRTIIWPLVKQMRVLLMPLLHRLTKPRTPRT NGMVERFNGRIADVLKTHRFDSREDMEQTLRAMWPCTTTNCRSQRWAARRLCRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15995; Mature: 15995
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTARYSNLNPEKALIWRIVHRDNLPWILRNGLYSKNSPKQDPRYVVVASRTIIWPLVKQ CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHH MRVLLMPLLHRLTKPRTPRTNGMVERFNGRIADVLKTHRFDSREDMEQTLRAMWPCTTTN HHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC CRSQRWAARRLCRP CHHHHHHHHHCCCC >Mature Secondary Structure MNTARYSNLNPEKALIWRIVHRDNLPWILRNGLYSKNSPKQDPRYVVVASRTIIWPLVKQ CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHH MRVLLMPLLHRLTKPRTPRTNGMVERFNGRIADVLKTHRFDSREDMEQTLRAMWPCTTTN HHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC CRSQRWAARRLCRP CHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA