Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610003

Identifier: 121610003

GI number: 121610003

Start: 3411683

End: 3412672

Strand: Direct

Name: 121610003

Synonym: Veis_3059

Alternate gene names: NA

Gene position: 3411683-3412672 (Clockwise)

Preceding gene: 121610002

Following gene: 121610004

Centisome position: 61.29

GC content: 67.37

Gene sequence:

>990_bases
ATGAACAGGCGACATTGGCTCGGCGCAACCCTGTGCGCCGTCGGCACGGCGGCGAGTCTCGTGCCGGTGACTGCACTGGC
CGAAGGCGGCGCATGGCCGAACCGGCCGATCCGGCTGATCGTGCCCTTTCCGGCCGGCGGCAGCACCGACATGGTGGCGC
GCCATCTCGCGCAAGGTCTCAGTGAGCGCCTTGGCACCTCCGTCATCGTCGACAACCGTGCCGGCGCGGCCGGCAACATC
GGCACCGACGCAGTGGCCAAGGCGGCGCCGGACGGGTACACCATCGGCCTGGTCACTTCCGGGCCGATGGTGAACAACAA
GTTCCTCTACAAGTCGATGCCCTTCGACCCCGACAAAGACCTGGCCCCGATTGCGTTGGTCTGCGAGATTCCGACGGTCT
TCGTCAGCAACCCGGAGCATTTGCCGGCGCGCGACCTCCAGGAATTCATTGCCATGGCGCGGGCCGAGCCCTCGGCGTTC
ACCGTCGCCACGCCGGGCAACGGCACGATCGGCCACCTGGCGCTTGCCGAGTTGTCGCTGACATCCGGAGTCCGGCTGCA
GGACGTGCCCTATCGCGGCGACACCCCTGCGCTGATGGACCTGCTCGGCGGCGTCGTGCAGGTCATCTCCGCGCCTGTCT
CCACTTTCATTCCGGGCATCCTGGCGGGCAAGTTGCGCGGGCTGGCGGTCACTGCGCAAGCGCGCTTGCCCGGGCTGCCC
GATGTCCCGACAGCCAGGGAGCAGGGGCTCGATCTGACGGCAAAGGTCTGGTTTGCGGTGGTCGGACCGGCCGGCATGCC
GGCTTTGGCGGTGCAGCAGTTGAATGAGCAAATCAACGGACTGCTCGATTCCGCACCGAGCCAAAGCAAGCTGCAGCAGT
ACGGCGCCGTGGTCGCGAGCGGGTCGCCCGAATGGCTGCGCCAGCGCATCCATGCCGACGGCCAGAAATGGCAGCAGGTG
ATCCGGGCCGCACAGGTCAAGCTCGACTGA

Upstream 100 bases:

>100_bases
AACTGCGCGGGCAGGCACAAGCCCGCATGCCGCAATTGCTGCAGCGCCTGGACGCGGCCCGCAAGGCATCTCGATGACAA
CACCCGGGAGACTGAAAAAA

Downstream 100 bases:

>100_bases
AAGCACGCTCCCATGAACAGCACGAACCCTGCGCCGATCGGCATCTTCGTCAAGACCGGTTCGCCCCAACTGATCGAGGT
GCTGGGCACCACGGCACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNRRHWLGATLCAVGTAASLVPVTALAEGGAWPNRPIRLIVPFPAGGSTDMVARHLAQGLSERLGTSVIVDNRAGAAGNI
GTDAVAKAAPDGYTIGLVTSGPMVNNKFLYKSMPFDPDKDLAPIALVCEIPTVFVSNPEHLPARDLQEFIAMARAEPSAF
TVATPGNGTIGHLALAELSLTSGVRLQDVPYRGDTPALMDLLGGVVQVISAPVSTFIPGILAGKLRGLAVTAQARLPGLP
DVPTAREQGLDLTAKVWFAVVGPAGMPALAVQQLNEQINGLLDSAPSQSKLQQYGAVVASGSPEWLRQRIHADGQKWQQV
IRAAQVKLD

Sequences:

>Translated_329_residues
MNRRHWLGATLCAVGTAASLVPVTALAEGGAWPNRPIRLIVPFPAGGSTDMVARHLAQGLSERLGTSVIVDNRAGAAGNI
GTDAVAKAAPDGYTIGLVTSGPMVNNKFLYKSMPFDPDKDLAPIALVCEIPTVFVSNPEHLPARDLQEFIAMARAEPSAF
TVATPGNGTIGHLALAELSLTSGVRLQDVPYRGDTPALMDLLGGVVQVISAPVSTFIPGILAGKLRGLAVTAQARLPGLP
DVPTAREQGLDLTAKVWFAVVGPAGMPALAVQQLNEQINGLLDSAPSQSKLQQYGAVVASGSPEWLRQRIHADGQKWQQV
IRAAQVKLD
>Mature_329_residues
MNRRHWLGATLCAVGTAASLVPVTALAEGGAWPNRPIRLIVPFPAGGSTDMVARHLAQGLSERLGTSVIVDNRAGAAGNI
GTDAVAKAAPDGYTIGLVTSGPMVNNKFLYKSMPFDPDKDLAPIALVCEIPTVFVSNPEHLPARDLQEFIAMARAEPSAF
TVATPGNGTIGHLALAELSLTSGVRLQDVPYRGDTPALMDLLGGVVQVISAPVSTFIPGILAGKLRGLAVTAQARLPGLP
DVPTAREQGLDLTAKVWFAVVGPAGMPALAVQQLNEQINGLLDSAPSQSKLQQYGAVVASGSPEWLRQRIHADGQKWQQV
IRAAQVKLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34445; Mature: 34445

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRHWLGATLCAVGTAASLVPVTALAEGGAWPNRPIRLIVPFPAGGSTDMVARHLAQGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
SERLGTSVIVDNRAGAAGNIGTDAVAKAAPDGYTIGLVTSGPMVNNKFLYKSMPFDPDKD
HHHCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEEECCCEECCEEEEECCCCCCCCC
LAPIALVCEIPTVFVSNPEHLPARDLQEFIAMARAEPSAFTVATPGNGTIGHLALAELSL
CCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHH
TSGVRLQDVPYRGDTPALMDLLGGVVQVISAPVSTFIPGILAGKLRGLAVTAQARLPGLP
HCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
DVPTAREQGLDLTAKVWFAVVGPAGMPALAVQQLNEQINGLLDSAPSQSKLQQYGAVVAS
CCCCHHHCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEC
GSPEWLRQRIHADGQKWQQVIRAAQVKLD
CCHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRRHWLGATLCAVGTAASLVPVTALAEGGAWPNRPIRLIVPFPAGGSTDMVARHLAQGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
SERLGTSVIVDNRAGAAGNIGTDAVAKAAPDGYTIGLVTSGPMVNNKFLYKSMPFDPDKD
HHHCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEEECCCEECCEEEEECCCCCCCCC
LAPIALVCEIPTVFVSNPEHLPARDLQEFIAMARAEPSAFTVATPGNGTIGHLALAELSL
CCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHH
TSGVRLQDVPYRGDTPALMDLLGGVVQVISAPVSTFIPGILAGKLRGLAVTAQARLPGLP
HCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
DVPTAREQGLDLTAKVWFAVVGPAGMPALAVQQLNEQINGLLDSAPSQSKLQQYGAVVAS
CCCCHHHCCCCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEC
GSPEWLRQRIHADGQKWQQVIRAAQVKLD
CCHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]