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The map label for this gene is yqaA [H]

Identifier: 121609973

GI number: 121609973

Start: 3383377

End: 3383922

Strand: Direct

Name: yqaA [H]

Synonym: Veis_3029

Alternate gene names: 121609973

Gene position: 3383377-3383922 (Clockwise)

Preceding gene: 121609968

Following gene: 121609979

Centisome position: 60.78

GC content: 64.84

Gene sequence:

>546_bases
ATGGAAATCTGGATACCTCAATTGTTGCAATGGCTGGCCCTGCCGCAGTTCGGTTTGAGCACGGTGTTTGTCGTGTCGGT
CATCTCGGCCACCTTGCTGCCGCTGGGCTCGGAGTTCGCGGTCTTTGGCCTCATCAAGCTCAACCCCGCGCTGTTTTGGC
CGACCATCCTGGTCGCCACTGCGGGCAACACGCTGGGCGGCGCGTTGAATTGGTGGCTTGGCCTGGGTGCGCACATGGTC
GTGGACAAGGTCCGTGGCGCCACCGAACTGCGGGCCTTGAACTGGCTCAAGCGCTTTGGCGCGCCGGCCTGCCTGCTGAG
TTGGCTGCCCGTGGTGGGCGATCCGTTGTGCGCTGTGGCCGGCTGGCTGAAGCTGCCGTTTTGGCCCTGCCTGGCCTACA
TGGCCGTGGGCAAGTTCCTGCGCTACTGGGTGATGACCAGCGCGCTGCTGTACTTCACGCCGGAGCATCTGCTGGTCGGC
AGCGCCGATTCCGGCCGGATGTGGGACGGCTGCATCCGTCTGGCCCAGGTCTTCGGTGGCGGCTGA

Upstream 100 bases:

>100_bases
AGTGGCACCGGGGATGGCAGCACAAGATACCGCTGCCTGGGCAGCAGACCATGGGCAAAGGGCGCAGACCCGTGTAGGAG
CGCCCCTACACTCCTGACCC

Downstream 100 bases:

>100_bases
ACGAAGTTCTGCTGCCCGGCCAGGCCGGTCGGCGGCTGGCTCGTGCAGCAGATCCCGCCGGCCTGAATGCCTGCAATGTG
GTTCAAAGCCGCTGCGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MEIWIPQLLQWLALPQFGLSTVFVVSVISATLLPLGSEFAVFGLIKLNPALFWPTILVATAGNTLGGALNWWLGLGAHMV
VDKVRGATELRALNWLKRFGAPACLLSWLPVVGDPLCAVAGWLKLPFWPCLAYMAVGKFLRYWVMTSALLYFTPEHLLVG
SADSGRMWDGCIRLAQVFGGG

Sequences:

>Translated_181_residues
MEIWIPQLLQWLALPQFGLSTVFVVSVISATLLPLGSEFAVFGLIKLNPALFWPTILVATAGNTLGGALNWWLGLGAHMV
VDKVRGATELRALNWLKRFGAPACLLSWLPVVGDPLCAVAGWLKLPFWPCLAYMAVGKFLRYWVMTSALLYFTPEHLLVG
SADSGRMWDGCIRLAQVFGGG
>Mature_181_residues
MEIWIPQLLQWLALPQFGLSTVFVVSVISATLLPLGSEFAVFGLIKLNPALFWPTILVATAGNTLGGALNWWLGLGAHMV
VDKVRGATELRALNWLKRFGAPACLLSWLPVVGDPLCAVAGWLKLPFWPCLAYMAVGKFLRYWVMTSALLYFTPEHLLVG
SADSGRMWDGCIRLAQVFGGG

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=132, Percent_Identity=40.1515151515151, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 19789; Mature: 19789

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIWIPQLLQWLALPQFGLSTVFVVSVISATLLPLGSEFAVFGLIKLNPALFWPTILVAT
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH
AGNTLGGALNWWLGLGAHMVVDKVRGATELRALNWLKRFGAPACLLSWLPVVGDPLCAVA
CCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
GWLKLPFWPCLAYMAVGKFLRYWVMTSALLYFTPEHLLVGSADSGRMWDGCIRLAQVFGG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MEIWIPQLLQWLALPQFGLSTVFVVSVISATLLPLGSEFAVFGLIKLNPALFWPTILVAT
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH
AGNTLGGALNWWLGLGAHMVVDKVRGATELRALNWLKRFGAPACLLSWLPVVGDPLCAVA
CCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHH
GWLKLPFWPCLAYMAVGKFLRYWVMTSALLYFTPEHLLVGSADSGRMWDGCIRLAQVFGG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]