Definition | Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence. |
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Accession | NC_008762 |
Length | 21,611 |
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The map label for this gene is 121583552
Identifier: 121583552
GI number: 121583552
Start: 6171
End: 7070
Strand: Reverse
Name: 121583552
Synonym: Pnap_4981
Alternate gene names: NA
Gene position: 7070-6171 (Counterclockwise)
Preceding gene: 121583553
Following gene: 121583551
Centisome position: 32.71
GC content: 63.67
Gene sequence:
>900_bases ATGGCAATCGTTACTTTTGAATCGGTCGCAACCGCCGCCGAGGCACTTCAAGCCGCAGGCCAGCGGGCCAGCGTGAGAGC CGTCACAGCCGCAATCGGGGGCGGTAGCCCTAATGCCGTCCTGAAACTGCTTGCAGAGTGGAAGGCGGGCCGTCCTGTCG TGCGTATTGCCGATACCGAGCTGGACCACCGCATCACCGATGCGATCAAGGTGCAGATGCAGCGCGTGGCCGAACAAGCC GCAGCCACAGCCGAAGAACGCGCCGCCGCCGCCGCCGATGATTTGCAAGCAATCTCAGAAGCCCAAGCCGCCGCCGAGCA GCAAATCACCGTGCTGACGACCGAGCGCGATGCAGCTCAAACCAAAGCCGCCTCCATTGACGAGCAGTTGAAAGCCGCTC AGGCTGACGCGCACCGCGCCGCCGAACAGGCCACAGCCAGCGCAACCGCCTTGCGCCAAGAGTTGATGACCGAGCGCCAG CGTCAAGAAACCACCGCCGCCGCACTGGCCCGCGCCGAAGTACGCTTGGAAGCTGTACCAGGACTGCAAGCCGAAATCGA GCGCCTACGCATCGCACTGGAGACAGATCAGCAAGCCCGCCAACAAGCCGAGCAGCAAGCCGCCGTGTTGACTGCAAAGC TGGAAGCCGCCGACCGGCGGGCCACAGAAGCCGACGCCAGGACGACCAAGGCCGAAGCACGAACCGACGCCGTAGCGCGT GAGCTGCTGAATGCAAACGCCATTGTCCAAGCCGGTCAAGCCCGATTAGAGAGCGCGGCGCGTGAACTGGAGGAGGCCAA AAAGGCCGTGGCCACCGCTCAAGCAGCCGCCAAGAAATCGAGCGAGGAAGCCGCTGAGTTGCGTGGTGCAAAACCAAAGG CCGCTAAGGCGCAGGTCTAA
Upstream 100 bases:
>100_bases CCAAGGTCTCTAAATTTAATTTCTAAAAATAACAAAAGATAATGTTATCTGTTATGATTACGTTATTATTATAAATAATA CATAACAAAAGGATAACATC
Downstream 100 bases:
>100_bases GGTGCTGTCCTCGACCATGGTCAAGCCGTAGCCACCTATCCCATGCCGGGCGACAGGGTGGTCATAGGCCGCAATGGAGC GCTTTGCCTGCCGCATGTAC
Product: mucin-associated surface protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAIVTFESVATAAEALQAAGQRASVRAVTAAIGGGSPNAVLKLLAEWKAGRPVVRIADTELDHRITDAIKVQMQRVAEQA AATAEERAAAAADDLQAISEAQAAAEQQITVLTTERDAAQTKAASIDEQLKAAQADAHRAAEQATASATALRQELMTERQ RQETTAAALARAEVRLEAVPGLQAEIERLRIALETDQQARQQAEQQAAVLTAKLEAADRRATEADARTTKAEARTDAVAR ELLNANAIVQAGQARLESAARELEEAKKAVATAQAAAKKSSEEAAELRGAKPKAAKAQV
Sequences:
>Translated_299_residues MAIVTFESVATAAEALQAAGQRASVRAVTAAIGGGSPNAVLKLLAEWKAGRPVVRIADTELDHRITDAIKVQMQRVAEQA AATAEERAAAAADDLQAISEAQAAAEQQITVLTTERDAAQTKAASIDEQLKAAQADAHRAAEQATASATALRQELMTERQ RQETTAAALARAEVRLEAVPGLQAEIERLRIALETDQQARQQAEQQAAVLTAKLEAADRRATEADARTTKAEARTDAVAR ELLNANAIVQAGQARLESAARELEEAKKAVATAQAAAKKSSEEAAELRGAKPKAAKAQV >Mature_298_residues AIVTFESVATAAEALQAAGQRASVRAVTAAIGGGSPNAVLKLLAEWKAGRPVVRIADTELDHRITDAIKVQMQRVAEQAA ATAEERAAAAADDLQAISEAQAAAEQQITVLTTERDAAQTKAASIDEQLKAAQADAHRAAEQATASATALRQELMTERQR QETTAAALARAEVRLEAVPGLQAEIERLRIALETDQQARQQAEQQAAVLTAKLEAADRRATEADARTTKAEARTDAVARE LLNANAIVQAGQARLESAARELEEAKKAVATAQAAAKKSSEEAAELRGAKPKAAKAQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31418; Mature: 31287
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVTFESVATAAEALQAAGQRASVRAVTAAIGGGSPNAVLKLLAEWKAGRPVVRIADTE CEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCH LDHRITDAIKVQMQRVAEQAAATAEERAAAAADDLQAISEAQAAAEQQITVLTTERDAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHH TKAASIDEQLKAAQADAHRAAEQATASATALRQELMTERQRQETTAAALARAEVRLEAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLQAEIERLRIALETDQQARQQAEQQAAVLTAKLEAADRRATEADARTTKAEARTDAVAR CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLNANAIVQAGQARLESAARELEEAKKAVATAQAAAKKSSEEAAELRGAKPKAAKAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AIVTFESVATAAEALQAAGQRASVRAVTAAIGGGSPNAVLKLLAEWKAGRPVVRIADTE EEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCH LDHRITDAIKVQMQRVAEQAAATAEERAAAAADDLQAISEAQAAAEQQITVLTTERDAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHH TKAASIDEQLKAAQADAHRAAEQATASATALRQELMTERQRQETTAAALARAEVRLEAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLQAEIERLRIALETDQQARQQAEQQAAVLTAKLEAADRRATEADARTTKAEARTDAVAR CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLNANAIVQAGQARLESAARELEEAKKAVATAQAAAKKSSEEAAELRGAKPKAAKAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA