Definition | Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence. |
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Accession | NC_008762 |
Length | 21,611 |
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The map label for this gene is 121583551
Identifier: 121583551
GI number: 121583551
Start: 5343
End: 5972
Strand: Reverse
Name: 121583551
Synonym: Pnap_4980
Alternate gene names: NA
Gene position: 5972-5343 (Counterclockwise)
Preceding gene: 121583552
Following gene: 121583550
Centisome position: 27.63
GC content: 57.14
Gene sequence:
>630_bases ATGATTTTTGGTGTATTGAATCAAAAAGGGGGCGTCGGCAAAACGACCCTCAGCGTCAACCTTGCGGCCTGCTTTGCACG CGCTGGTGCGCGTGTCCTGTTGATCGACGCCGACCCCCAGGGAAGCGCCCTCGATTGGGCCGCAGCCCGTCAAGGACCGC CCCTCTTTTCTGTTGTCGGATTCCCCCGCGCCACCATCCACAAGGAAATCAGCCAACTTGGCCAAGGCTATGACCACATC ATCATCGATGGCCCGCCACGAGTCACCGACCTGGCCCGGTCCGCCATCATGGCCTCTGATGTCGTTGTCATCCCGGTCCA GCCGAGCCCTTATGACATCTGGGCGGCCGAAGAAGTTGTGAAGCTGATCGCGGAGGCTCACATATATAAAGAAAATATCA AATCCGTGTTTGTGGTAAATCGCAAAATTACAAATACGGCAATAGGGCGCGACGTGCGCGATGCCCTTGCTGCTTACCCG ATCCGCGTCCTGGATGCCAGCGTGGCTCAGCGGGTTGTTTTTGCCGAAGCTGCGGCCCAGGGTCAAGCTATTTTTGAAAT TGATCCTGCCGGTCCTGCCGTTGCCGAGATCGAGGCTGTTGCAGCCGAGCTGATGGAGTACGCCAAATGA
Upstream 100 bases:
>100_bases ACCCGAGCCAGGGAAAGGCAAAGACAAGGGACGAGGTTGATTGCTTTATTTAAGGTTTTCTGTAAAAGTACAAAAATACA AAACAGTAAAAGGTGAAATC
Downstream 100 bases:
>100_bases GCACCAAGAAAATCGCTTTCGGGACCAAGCCGACCAACAAACCAGAACCGGCCCCGGTTGATTCGTGGGTGGAGAATCGC GCCGCTGGCGAGGCCGAAGC
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Partition Protein; ParA Family Protein; ParA-Like Protein; Plasmid Partitioning Protein; Plasmid Partition Protein ParA; ParA Protein; Partition-Related Protein; Plasmid Partition Protein ParA-Like Protein; Partitioning Protein; Partitioning Protein ParA; Partition Protein A; ATPases Involved In Chromosome Partitioning; CobQ/CobB/MinD/ParA Domain-Containing Protein; Plasmid Partitioning-Family Protein; ATPases Involved In Chromosome Partitioning-Like Protein; Plasmid Partition Protein; Chromosome Partitioning ATPase; ATPase ParA Type; ATPase; PARA Protein; Plasmid Stability Protein ParA; Plasmid Partitioning Protein F; ParA Family Chromosome Partitioning ATPase; Plasmid Partition Protein ParF; ParA Partitioning Protein; Partitioning Protein ParA Family; Plasmid Partitioning Protein ParA; Chromosome Partitioning ATPase ParA; Plasmid Partition ATPase; Chromosome Partitioning; ATPase Involved In Chromosome Partitioning-Like Protein; Plasmid Partition Protein Homolog ParA; Partition Protein ParA-Like Protein; Stability/Partitioning Determinant; MinD/ParA Family ATPase; ParA Partitioning-Like Protein; Chromosome Partitioning Protein ParA; Plasmid Partitioning-Like Protein; Partitioning Protein ParA-Family; ParA Plasmid Partitioning Protein; Chromosome Partition Protein ParA; Chmomosome Partition Protein A; Chromosome Segregation ATPase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIFGVLNQKGGVGKTTLSVNLAACFARAGARVLLIDADPQGSALDWAAARQGPPLFSVVGFPRATIHKEISQLGQGYDHI IIDGPPRVTDLARSAIMASDVVVIPVQPSPYDIWAAEEVVKLIAEAHIYKENIKSVFVVNRKITNTAIGRDVRDALAAYP IRVLDASVAQRVVFAEAAAQGQAIFEIDPAGPAVAEIEAVAAELMEYAK
Sequences:
>Translated_209_residues MIFGVLNQKGGVGKTTLSVNLAACFARAGARVLLIDADPQGSALDWAAARQGPPLFSVVGFPRATIHKEISQLGQGYDHI IIDGPPRVTDLARSAIMASDVVVIPVQPSPYDIWAAEEVVKLIAEAHIYKENIKSVFVVNRKITNTAIGRDVRDALAAYP IRVLDASVAQRVVFAEAAAQGQAIFEIDPAGPAVAEIEAVAAELMEYAK >Mature_209_residues MIFGVLNQKGGVGKTTLSVNLAACFARAGARVLLIDADPQGSALDWAAARQGPPLFSVVGFPRATIHKEISQLGQGYDHI IIDGPPRVTDLARSAIMASDVVVIPVQPSPYDIWAAEEVVKLIAEAHIYKENIKSVFVVNRKITNTAIGRDVRDALAAYP IRVLDASVAQRVVFAEAAAQGQAIFEIDPAGPAVAEIEAVAAELMEYAK
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22228; Mature: 22228
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGVLNQKGGVGKTTLSVNLAACFARAGARVLLIDADPQGSALDWAAARQGPPLFSVVG CEEEEECCCCCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCCEEEECC FPRATIHKEISQLGQGYDHIIIDGPPRVTDLARSAIMASDVVVIPVQPSPYDIWAAEEVV CCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHH KLIAEAHIYKENIKSVFVVNRKITNTAIGRDVRDALAAYPIRVLDASVAQRVVFAEAAAQ HHHHHHHHHHHCCCEEEEECCCHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC GQAIFEIDPAGPAVAEIEAVAAELMEYAK CCEEEEECCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIFGVLNQKGGVGKTTLSVNLAACFARAGARVLLIDADPQGSALDWAAARQGPPLFSVVG CEEEEECCCCCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCCEEEECC FPRATIHKEISQLGQGYDHIIIDGPPRVTDLARSAIMASDVVVIPVQPSPYDIWAAEEVV CCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHH KLIAEAHIYKENIKSVFVVNRKITNTAIGRDVRDALAAYPIRVLDASVAQRVVFAEAAAQ HHHHHHHHHHHCCCEEEEECCCHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC GQAIFEIDPAGPAVAEIEAVAAELMEYAK CCEEEEECCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA