Definition Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence.
Accession NC_008762
Length 21,611

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The map label for this gene is 121583550

Identifier: 121583550

GI number: 121583550

Start: 5113

End: 5346

Strand: Reverse

Name: 121583550

Synonym: Pnap_4979

Alternate gene names: NA

Gene position: 5346-5113 (Counterclockwise)

Preceding gene: 121583551

Following gene: 121583549

Centisome position: 24.74

GC content: 54.7

Gene sequence:

>234_bases
ATGAGCACCAAGAAAATCGCTTTCGGGACCAAGCCGACCAACAAACCAGAACCGGCCCCGGTTGATTCGTGGGTGGAGAA
TCGCGCCGCTGGCGAGGCCGAAGCGATGAAGCGTTTGACCATCGACATCCCCGAGAGCTTGCACCGAACGATCAAATCCC
AATGCGCCATGCGCGGCACCAAGATTGCGGACGAAGTGCGCGAGTTACTTTTAAAGAAATACGGAAATCAGTAA

Upstream 100 bases:

>100_bases
AAGCTGCGGCCCAGGGTCAAGCTATTTTTGAAATTGATCCTGCCGGTCCTGCCGTTGCCGAGATCGAGGCTGTTGCAGCC
GAGCTGATGGAGTACGCCAA

Downstream 100 bases:

>100_bases
ATACGCTTTTCCTCATGGAGGCGAAATCATGGCAAATTTAGAACAGCCGCCGACGCCGCGCAAGGAACGAAAACTTTCTC
ACCTCACCCTGTATTTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSTKKIAFGTKPTNKPEPAPVDSWVENRAAGEAEAMKRLTIDIPESLHRTIKSQCAMRGTKIADEVRELLLKKYGNQ

Sequences:

>Translated_77_residues
MSTKKIAFGTKPTNKPEPAPVDSWVENRAAGEAEAMKRLTIDIPESLHRTIKSQCAMRGTKIADEVRELLLKKYGNQ
>Mature_76_residues
STKKIAFGTKPTNKPEPAPVDSWVENRAAGEAEAMKRLTIDIPESLHRTIKSQCAMRGTKIADEVRELLLKKYGNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8597; Mature: 8466

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKKIAFGTKPTNKPEPAPVDSWVENRAAGEAEAMKRLTIDIPESLHRTIKSQCAMRGT
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
KIADEVRELLLKKYGNQ
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STKKIAFGTKPTNKPEPAPVDSWVENRAAGEAEAMKRLTIDIPESLHRTIKSQCAMRGT
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
KIADEVRELLLKKYGNQ
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA