Definition | Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence. |
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Accession | NC_008762 |
Length | 21,611 |
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The map label for this gene is 121583549
Identifier: 121583549
GI number: 121583549
Start: 4501
End: 4917
Strand: Reverse
Name: 121583549
Synonym: Pnap_4978
Alternate gene names: NA
Gene position: 4917-4501 (Counterclockwise)
Preceding gene: 121583550
Following gene: 121583548
Centisome position: 22.75
GC content: 57.55
Gene sequence:
>417_bases ATGAACATGCACTCTATCCAAAATGAGGCCGACTACAAGGCCGCGCTCAAGATCGTTTCTGCTTTGGTGGACGTAGATCC ACAACGCGGCACATTGGAGGCCGACCGCCTTGAAGCGTTGGGCTTCCTGGTGGAGGCTTATGAAAGCGGCCTTGCCAAAT CAATGCTGCAAGGGGGAAATTTGGAGAGTGCAATGGGCCATGACGGCATCGACCATTCGCTCTACACGCTGGCCGACTAC CCGGTGCTGGCTGCGCTGGCGCAGGAGAGGACAAGCGCAACCAAGCTGGACGGCAGGGCATGCCGTTTTCTCTACACTGA AGCTGGGTCTCGGATGGATGGGACAACAGTGTCAGCCCAGGAGATTGCGTTCATGCGAGCGCTGGAGGTCGATGTTCGTG GAGTCACCCCATGCTAG
Upstream 100 bases:
>100_bases TCCCGGTGACTGCGAAGATCGGGACCATAGGGATATATCGACTTGATGCCGGTGGGCTGCGCCTCGTTCGACGGTTGACA GGGGTTAAGTTGGAGCAGAC
Downstream 100 bases:
>100_bases TTTTCCTCGACACCGAATTCACCGAATTTGTCCGGCCCGACCTAATCAGCATTGCGCTTGTGAGTGAGGATGGCCGGGAA TTCTATGCCGAGCGAACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNMHSIQNEADYKAALKIVSALVDVDPQRGTLEADRLEALGFLVEAYESGLAKSMLQGGNLESAMGHDGIDHSLYTLADY PVLAALAQERTSATKLDGRACRFLYTEAGSRMDGTTVSAQEIAFMRALEVDVRGVTPC
Sequences:
>Translated_138_residues MNMHSIQNEADYKAALKIVSALVDVDPQRGTLEADRLEALGFLVEAYESGLAKSMLQGGNLESAMGHDGIDHSLYTLADY PVLAALAQERTSATKLDGRACRFLYTEAGSRMDGTTVSAQEIAFMRALEVDVRGVTPC >Mature_138_residues MNMHSIQNEADYKAALKIVSALVDVDPQRGTLEADRLEALGFLVEAYESGLAKSMLQGGNLESAMGHDGIDHSLYTLADY PVLAALAQERTSATKLDGRACRFLYTEAGSRMDGTTVSAQEIAFMRALEVDVRGVTPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14885; Mature: 14885
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMHSIQNEADYKAALKIVSALVDVDPQRGTLEADRLEALGFLVEAYESGLAKSMLQGGN CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC LESAMGHDGIDHSLYTLADYPVLAALAQERTSATKLDGRACRFLYTEAGSRMDGTTVSAQ CCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHECCCCCCCCCCCCHHH EIAFMRALEVDVRGVTPC HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNMHSIQNEADYKAALKIVSALVDVDPQRGTLEADRLEALGFLVEAYESGLAKSMLQGGN CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC LESAMGHDGIDHSLYTLADYPVLAALAQERTSATKLDGRACRFLYTEAGSRMDGTTVSAQ CCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHECCCCCCCCCCCCHHH EIAFMRALEVDVRGVTPC HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA