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The map label for this gene is ychJ [C]

Identifier: 120612998

GI number: 120612998

Start: 4848608

End: 4849042

Strand: Reverse

Name: ychJ [C]

Synonym: Aave_4362

Alternate gene names: 120612998

Gene position: 4849042-4848608 (Counterclockwise)

Preceding gene: 120613001

Following gene: 120612997

Centisome position: 90.59

GC content: 70.8

Gene sequence:

>435_bases
ATGGTGGCCGTGTCCCGTTTCTCACCCTCTTCTTCCGACTGTCCCTGCGGGCGGCTTTCCAGCCGGCGCGCGCCGCTGTC
CTATGCGGAATGCTGCGGACGGTACATCGACCACTGGGATGCGTGCCCCGCGCCCGATGCCGAAAGCCTGATGCGATCGC
GCTACACGGCCTTCGTGCGGGGGAACGCGGGTTACCTGCTCGCCACCTGGGCCGCGGAGCACCGGCCTCCCTCGGTGGAG
TTCGATCCGGGCGTGCGCTGGCTCGGCCTGGAGGTGCGGGAGCACCGCCCCCTGGGCGAAGACCACGCCGAGGTCGAGTT
CGTGGCCCGCCAACGCGACGCCGGGGGACGCGCGCATCGCCTGCACGAGCGCAGCCGCTTCGTGCGCGAGGGCGGGCGCT
GGTTCTATGTGAATGGCGAGTTTCCGCGCGGCTGA

Upstream 100 bases:

>100_bases
CGATCTCCAGGGGAAAAAGGGGCCAGGCATGCATACCGCGCCGGCAGCGAGTGTGCCATCGGCGGCGCATCTGCAAGAAT
GCGGACCCGTTCCCATGCCG

Downstream 100 bases:

>100_bases
TACCGCCCGCCGATGCCAACCGATGCCCATCGCTCCTGACAGCCTCTATCCCGACGCATGGCGCAGAGCGGACGGCGACG
ATGCCCACGCATCCGGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVAVSRFSPSSSDCPCGRLSSRRAPLSYAECCGRYIDHWDACPAPDAESLMRSRYTAFVRGNAGYLLATWAAEHRPPSVE
FDPGVRWLGLEVREHRPLGEDHAEVEFVARQRDAGGRAHRLHERSRFVREGGRWFYVNGEFPRG

Sequences:

>Translated_144_residues
MVAVSRFSPSSSDCPCGRLSSRRAPLSYAECCGRYIDHWDACPAPDAESLMRSRYTAFVRGNAGYLLATWAAEHRPPSVE
FDPGVRWLGLEVREHRPLGEDHAEVEFVARQRDAGGRAHRLHERSRFVREGGRWFYVNGEFPRG
>Mature_144_residues
MVAVSRFSPSSSDCPCGRLSSRRAPLSYAECCGRYIDHWDACPAPDAESLMRSRYTAFVRGNAGYLLATWAAEHRPPSVE
FDPGVRWLGLEVREHRPLGEDHAEVEFVARQRDAGGRAHRLHERSRFVREGGRWFYVNGEFPRG

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=139, Percent_Identity=40.2877697841727, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023006 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16350; Mature: 16350

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVSRFSPSSSDCPCGRLSSRRAPLSYAECCGRYIDHWDACPAPDAESLMRSRYTAFVR
CEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEE
GNAGYLLATWAAEHRPPSVEFDPGVRWLGLEVREHRPLGEDHAEVEFVARQRDAGGRAHR
CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEHCCCCCCCCCCHHHHHHHHHCCCCCHHHH
LHERSRFVREGGRWFYVNGEFPRG
HHHHHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MVAVSRFSPSSSDCPCGRLSSRRAPLSYAECCGRYIDHWDACPAPDAESLMRSRYTAFVR
CEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEEE
GNAGYLLATWAAEHRPPSVEFDPGVRWLGLEVREHRPLGEDHAEVEFVARQRDAGGRAHR
CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEHCCCCCCCCCCHHHHHHHHHCCCCCHHHH
LHERSRFVREGGRWFYVNGEFPRG
HHHHHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA