Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yieH [H]
Identifier: 120612996
GI number: 120612996
Start: 4845713
End: 4846438
Strand: Reverse
Name: yieH [H]
Synonym: Aave_4360
Alternate gene names: 120612996
Gene position: 4846438-4845713 (Counterclockwise)
Preceding gene: 120612997
Following gene: 120612994
Centisome position: 90.54
GC content: 71.9
Gene sequence:
>726_bases ATGCCCACCGACGCCCTGTCGCTGTCCCCTTCCACCCGGCCCGGGACGTTTCCTTCGTTCGGCGCCGTGCTGTTCGATTG CGACGGCGTGCTGGTGGACAGCGAGCCGATCACCCACCGCGTGCTGCGTGCCATGCTGGAGGAGTCCGGATGGCCGCTCA CGCTCGAGGAGTGCATGCGCATCTTCATCGGCAAGGCCGTGCGCAGCGAAGCCGCCCGGATCGAGGCGGAGACGGGCCGT CCGTTGACGGACGAGTGGATGGCCCTTTTCTATGAGCGGCGCAATGCCGCGCTGGCTGCGGAGCTGGAGGCCATTGCGGG CGCGCGGCAGGCCGTGGAGGCGGCGCACGCCCGCACGTCGGGGCGCATCGCTTGCGCATCCGGCGCCGACCGGCACAAGG TGGAGCTGCAGCTTTCGAAGGTGGGACTGCTGCCGCACTTCCAGGGGCGCGTGTTCAGCGGGCACGAGATGCCCCGCACC AAGCCGGCGCCGGACGTGTACCTGGCCGCGGCCGCAGCGTTGGGGGTGGCGCCCGCCCGGTGCCTCGTCGTCGAGGACAC GGTGACGGGCGTCACCGCGGGCGTGGCCGCCGGGGCTGCCGTGGTGGGCTACAGCCCGGCGGCCTGGGGCCACGACGCCG CCGAAGCCTTGCGGGCGGCAGGGGCCTTCACGGTCATCGGTTCGATGGCCGAGTTGCCGGATTTCCTGGGCAAGGCGCCG GCTTAA
Upstream 100 bases:
>100_bases GCGGGCGCCAGGCCCGCATGCGGTAGATTCGATTGTGCTTTGCGGCGCTCCAGGCGGGCGCCGCTTTTTGGCGCGCACTT TCAACGGATCTATCTCTGCC
Downstream 100 bases:
>100_bases CGGTTGCTAGAACTTCCACCATTTCTTGTTTTTCTTCGCTGGCCTTTCGTGCGTTCGGGACGTGGCGGGGGGCGGCTCCG CATTACGGTCTGCGGTGGCG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPTDALSLSPSTRPGTFPSFGAVLFDCDGVLVDSEPITHRVLRAMLEESGWPLTLEECMRIFIGKAVRSEAARIEAETGR PLTDEWMALFYERRNAALAAELEAIAGARQAVEAAHARTSGRIACASGADRHKVELQLSKVGLLPHFQGRVFSGHEMPRT KPAPDVYLAAAAALGVAPARCLVVEDTVTGVTAGVAAGAAVVGYSPAAWGHDAAEALRAAGAFTVIGSMAELPDFLGKAP A
Sequences:
>Translated_241_residues MPTDALSLSPSTRPGTFPSFGAVLFDCDGVLVDSEPITHRVLRAMLEESGWPLTLEECMRIFIGKAVRSEAARIEAETGR PLTDEWMALFYERRNAALAAELEAIAGARQAVEAAHARTSGRIACASGADRHKVELQLSKVGLLPHFQGRVFSGHEMPRT KPAPDVYLAAAAALGVAPARCLVVEDTVTGVTAGVAAGAAVVGYSPAAWGHDAAEALRAAGAFTVIGSMAELPDFLGKAP A >Mature_240_residues PTDALSLSPSTRPGTFPSFGAVLFDCDGVLVDSEPITHRVLRAMLEESGWPLTLEECMRIFIGKAVRSEAARIEAETGRP LTDEWMALFYERRNAALAAELEAIAGARQAVEAAHARTSGRIACASGADRHKVELQLSKVGLLPHFQGRVFSGHEMPRTK PAPDVYLAAAAALGVAPARCLVVEDTVTGVTAGVAAGAAVVGYSPAAWGHDAAEALRAAGAFTVIGSMAELPDFLGKAPA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=212, Percent_Identity=31.6037735849057, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=27.1276595744681, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1788021, Length=181, Percent_Identity=30.939226519337, Blast_Score=61, Evalue=6e-11, Organism=Drosophila melanogaster, GI116008157, Length=185, Percent_Identity=33.5135135135135, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 25219; Mature: 25088
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDALSLSPSTRPGTFPSFGAVLFDCDGVLVDSEPITHRVLRAMLEESGWPLTLEECMR CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCCCEEHHHHHH IFIGKAVRSEAARIEAETGRPLTDEWMALFYERRNAALAAELEAIAGARQAVEAAHARTS HHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC GRIACASGADRHKVELQLSKVGLLPHFQGRVFSGHEMPRTKPAPDVYLAAAAALGVAPAR CCEEECCCCCCEEEEEEEEHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCE CLVVEDTVTGVTAGVAAGAAVVGYSPAAWGHDAAEALRAAGAFTVIGSMAELPDFLGKAP EEEEECCHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC A C >Mature Secondary Structure PTDALSLSPSTRPGTFPSFGAVLFDCDGVLVDSEPITHRVLRAMLEESGWPLTLEECMR CCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHCCCCEEHHHHHH IFIGKAVRSEAARIEAETGRPLTDEWMALFYERRNAALAAELEAIAGARQAVEAAHARTS HHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC GRIACASGADRHKVELQLSKVGLLPHFQGRVFSGHEMPRTKPAPDVYLAAAAALGVAPAR CCEEECCCCCCEEEEEEEEHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCE CLVVEDTVTGVTAGVAAGAAVVGYSPAAWGHDAAEALRAAGAFTVIGSMAELPDFLGKAP EEEEECCHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]