Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612954
Identifier: 120612954
GI number: 120612954
Start: 4796319
End: 4797215
Strand: Reverse
Name: 120612954
Synonym: Aave_4318
Alternate gene names: NA
Gene position: 4797215-4796319 (Counterclockwise)
Preceding gene: 120612955
Following gene: 120612953
Centisome position: 89.62
GC content: 69.79
Gene sequence:
>897_bases ATGGCGCCGGCGTCGGACCTGCAGGAGCGGCAACAACTGCGCATCGCGCTGCTTATCGATGCGGACAACGCACCCGCGGA GATGATCGACGAGATCCTGACCGAGCTGTCCACGCTCGGCGTGATCAGCATCCGCCGCGCCTACGGCAACTGGACCAAAT CCGCGCTGTCGGGATGGCAGTCCAAGCTGCTGGAGTTTGCCGTGCGCCCCATCCAGCAGTTCGACTACTCCAGGCGCAAA AACGCCACCGACATGGCCATGACCGTGGATGCGATGGAACTGCTCTACACCGACCGGCCGGACGCCTTCGGTATCGTCTC GTCGGATGCCGACTTCACGCCCCTGGTGATGCACCTGCGGGCCAAGGGCGCGGCCGTGTATGGCTTCGGCGCGCAGCAGA CGCCCCGGCCGTTCGTCAACGCCTGTTCCCGGTTCCTGTACCTCGAGGCGCTGGCTGCCGCGGCCGTACCGGCCGTGGCG GTCGCGCCCGAACCGCTCCCGCCGCCGCCCGAAGCCGCTCCGGCACCGGCTCCCGGCCGGCCGTCGCGCGATGCTTCCGC AGCCACTGCCGCCGATCCCCCCGCGCCGGGCCACCCCGCACGGCCCGCTGCCGGGTTGCGCATTCCTACGCCGGAGCTGC GGCAGGACACTGCGCTCATGAACCTGTTGCGCGATGCGGTGGCCGCCACGCAGGACGAGAGCGGCTGGGCGAAGGTGGGT GCCGTCGGCACGCAGATCGCCAACAAGGCCTCGTTCGACGCCCGCAACTACGGGTACGCCACGCTCACCAAGCTGCTGGC CGCGACCCAGGCATTCGAGATGCGCGACGAAGGCACTTCGAAGGTTTCGGTGCGCGACAGGCGCGTCGCCTCTGCGGCGC GCGGACCGGCCGGATGA
Upstream 100 bases:
>100_bases GCCACCCGATAGCTTCCCCTTCGGCGAAGCGTTGCTCAAGCCGCTGCGCTCGGGCGAAGCGCTGGCCTGGCGGGCGGTGG CTGGCGGAGCGGACTGAGCC
Downstream 100 bases:
>100_bases GGCCCCCGGACCGGCTCGCACGGCAGGTTCTGCGACCGGCGGATAAGGTCGAGTGGGAACGCCCCTGGTTCACCCCGTTG CGCCGTGCCGGCCGGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAPASDLQERQQLRIALLIDADNAPAEMIDEILTELSTLGVISIRRAYGNWTKSALSGWQSKLLEFAVRPIQQFDYSRRK NATDMAMTVDAMELLYTDRPDAFGIVSSDADFTPLVMHLRAKGAAVYGFGAQQTPRPFVNACSRFLYLEALAAAAVPAVA VAPEPLPPPPEAAPAPAPGRPSRDASAATAADPPAPGHPARPAAGLRIPTPELRQDTALMNLLRDAVAATQDESGWAKVG AVGTQIANKASFDARNYGYATLTKLLAATQAFEMRDEGTSKVSVRDRRVASAARGPAG
Sequences:
>Translated_298_residues MAPASDLQERQQLRIALLIDADNAPAEMIDEILTELSTLGVISIRRAYGNWTKSALSGWQSKLLEFAVRPIQQFDYSRRK NATDMAMTVDAMELLYTDRPDAFGIVSSDADFTPLVMHLRAKGAAVYGFGAQQTPRPFVNACSRFLYLEALAAAAVPAVA VAPEPLPPPPEAAPAPAPGRPSRDASAATAADPPAPGHPARPAAGLRIPTPELRQDTALMNLLRDAVAATQDESGWAKVG AVGTQIANKASFDARNYGYATLTKLLAATQAFEMRDEGTSKVSVRDRRVASAARGPAG >Mature_297_residues APASDLQERQQLRIALLIDADNAPAEMIDEILTELSTLGVISIRRAYGNWTKSALSGWQSKLLEFAVRPIQQFDYSRRKN ATDMAMTVDAMELLYTDRPDAFGIVSSDADFTPLVMHLRAKGAAVYGFGAQQTPRPFVNACSRFLYLEALAAAAVPAVAV APEPLPPPPEAAPAPAPGRPSRDASAATAADPPAPGHPARPAAGLRIPTPELRQDTALMNLLRDAVAATQDESGWAKVGA VGTQIANKASFDARNYGYATLTKLLAATQAFEMRDEGTSKVSVRDRRVASAARGPAG
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31695; Mature: 31564
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPASDLQERQQLRIALLIDADNAPAEMIDEILTELSTLGVISIRRAYGNWTKSALSGWQ CCCHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH SKLLEFAVRPIQQFDYSRRKNATDMAMTVDAMELLYTDRPDAFGIVSSDADFTPLVMHLR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHH AKGAAVYGFGAQQTPRPFVNACSRFLYLEALAAAAVPAVAVAPEPLPPPPEAAPAPAPGR HCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCC PSRDASAATAADPPAPGHPARPAAGLRIPTPELRQDTALMNLLRDAVAATQDESGWAKVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AVGTQIANKASFDARNYGYATLTKLLAATQAFEMRDEGTSKVSVRDRRVASAARGPAG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCC >Mature Secondary Structure APASDLQERQQLRIALLIDADNAPAEMIDEILTELSTLGVISIRRAYGNWTKSALSGWQ CCHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH SKLLEFAVRPIQQFDYSRRKNATDMAMTVDAMELLYTDRPDAFGIVSSDADFTPLVMHLR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHH AKGAAVYGFGAQQTPRPFVNACSRFLYLEALAAAAVPAVAVAPEPLPPPPEAAPAPAPGR HCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCC PSRDASAATAADPPAPGHPARPAAGLRIPTPELRQDTALMNLLRDAVAATQDESGWAKVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AVGTQIANKASFDARNYGYATLTKLLAATQAFEMRDEGTSKVSVRDRRVASAARGPAG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA