Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612953
Identifier: 120612953
GI number: 120612953
Start: 4795501
End: 4796322
Strand: Reverse
Name: 120612953
Synonym: Aave_4317
Alternate gene names: NA
Gene position: 4796322-4795501 (Counterclockwise)
Preceding gene: 120612954
Following gene: 120612952
Centisome position: 89.6
GC content: 71.05
Gene sequence:
>822_bases ATGAGGCCCCCGGACCGGCTCGCACGGCAGGTTCTGCGACCGGCGGATAAGGTCGAGTGGGAACGCCCCTGGTTCACCCC GTTGCGCCGTGCCGGCCGGGCGGTCGCCGCGGGCGTGCATGCGGGGCAGCCCGTCTGGCAGGCCCTCGATGCCCAGGGAA TCCCGGCGTCCGGGAGGACGGCGGGCCCGCGCTTCGTTACCCAGGAATGCCAGCCTGTCGGCGAGGCCTACGAGGCCTTC ATCTTCCGCACGGGGCAGGTGCCCACCCGCGACAACCTGCACGATTTCTTCAACGGCCTGATCTGGCTGCATTACCCGCA GGCCAAGCGCCGGCTCAACGCCCTGCAGGCCGGCGCGATCGCCGCGCAGGGCGTCGGCGCGGTGCGCGGCCCGCTGCGCG ATGCGATCACGGTCTTCGACGAGAACGGCGCGGTGCTGTTCGCCCCCCGGGTGCTGCGGGATGCGCTCGCGGCGCGCGCG TGGCGCCGCCTGTTCACGGACCTGCGCCCGCTGTGGCGGCAGGCGCGGCTGGAAATCTTCGGCCATGCGCTGCTGGAACA GCTCGCCGCGCCCCGCAAGCCGCTCACGGCCCACGTGCTGCTGGTGCCGGATGCTCCTGAAGCGGTAGCTGACATCGACG GCTGGCTGGAGGGGCGCCTGGAGCCGGAGCTGCTGAAGGCCAAGCCCTTCACACCCCTTCCGGTGCTGGGGGTGCCCGGC TGGTGGGCCGAAAACGAGAACTTTTCCTTCTATGATGACTCTTCCGTGTTCCGCAGCGCACGCCCCGCATCACAGTACAC AACAGGGGCCCCTCCGCGCTGA
Upstream 100 bases:
>100_bases TGCTGGCCGCGACCCAGGCATTCGAGATGCGCGACGAAGGCACTTCGAAGGTTTCGGTGCGCGACAGGCGCGTCGCCTCT GCGGCGCGCGGACCGGCCGG
Downstream 100 bases:
>100_bases CACGGCGGCTTGAACGCCCGCCCGGCATCCCCAACTGACTGTCGGGTTCGAGACCAACCGCTTTACCTTCCCCCGCACCC AAACGCTTTCCCCTCCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRPPDRLARQVLRPADKVEWERPWFTPLRRAGRAVAAGVHAGQPVWQALDAQGIPASGRTAGPRFVTQECQPVGEAYEAF IFRTGQVPTRDNLHDFFNGLIWLHYPQAKRRLNALQAGAIAAQGVGAVRGPLRDAITVFDENGAVLFAPRVLRDALAARA WRRLFTDLRPLWRQARLEIFGHALLEQLAAPRKPLTAHVLLVPDAPEAVADIDGWLEGRLEPELLKAKPFTPLPVLGVPG WWAENENFSFYDDSSVFRSARPASQYTTGAPPR
Sequences:
>Translated_273_residues MRPPDRLARQVLRPADKVEWERPWFTPLRRAGRAVAAGVHAGQPVWQALDAQGIPASGRTAGPRFVTQECQPVGEAYEAF IFRTGQVPTRDNLHDFFNGLIWLHYPQAKRRLNALQAGAIAAQGVGAVRGPLRDAITVFDENGAVLFAPRVLRDALAARA WRRLFTDLRPLWRQARLEIFGHALLEQLAAPRKPLTAHVLLVPDAPEAVADIDGWLEGRLEPELLKAKPFTPLPVLGVPG WWAENENFSFYDDSSVFRSARPASQYTTGAPPR >Mature_273_residues MRPPDRLARQVLRPADKVEWERPWFTPLRRAGRAVAAGVHAGQPVWQALDAQGIPASGRTAGPRFVTQECQPVGEAYEAF IFRTGQVPTRDNLHDFFNGLIWLHYPQAKRRLNALQAGAIAAQGVGAVRGPLRDAITVFDENGAVLFAPRVLRDALAARA WRRLFTDLRPLWRQARLEIFGHALLEQLAAPRKPLTAHVLLVPDAPEAVADIDGWLEGRLEPELLKAKPFTPLPVLGVPG WWAENENFSFYDDSSVFRSARPASQYTTGAPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30368; Mature: 30368
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPPDRLARQVLRPADKVEWERPWFTPLRRAGRAVAAGVHAGQPVWQALDAQGIPASGRT CCCHHHHHHHHHCCHHHCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHCCCCCCCCCCC AGPRFVTQECQPVGEAYEAFIFRTGQVPTRDNLHDFFNGLIWLHYPQAKRRLNALQAGAI CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEECHHHHHHHHHHHHHHH AAQGVGAVRGPLRDAITVFDENGAVLFAPRVLRDALAARAWRRLFTDLRPLWRQARLEIF HHCCCHHHHHHHHHHHEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHALLEQLAAPRKPLTAHVLLVPDAPEAVADIDGWLEGRLEPELLKAKPFTPLPVLGVPG HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC WWAENENFSFYDDSSVFRSARPASQYTTGAPPR CCCCCCCCCEECCHHHHHHCCCCHHCCCCCCCC >Mature Secondary Structure MRPPDRLARQVLRPADKVEWERPWFTPLRRAGRAVAAGVHAGQPVWQALDAQGIPASGRT CCCHHHHHHHHHCCHHHCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHCCCCCCCCCCC AGPRFVTQECQPVGEAYEAFIFRTGQVPTRDNLHDFFNGLIWLHYPQAKRRLNALQAGAI CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEECHHHHHHHHHHHHHHH AAQGVGAVRGPLRDAITVFDENGAVLFAPRVLRDALAARAWRRLFTDLRPLWRQARLEIF HHCCCHHHHHHHHHHHEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHALLEQLAAPRKPLTAHVLLVPDAPEAVADIDGWLEGRLEPELLKAKPFTPLPVLGVPG HHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCC WWAENENFSFYDDSSVFRSARPASQYTTGAPPR CCCCCCCCCEECCHHHHHHCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA