Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612830
Identifier: 120612830
GI number: 120612830
Start: 4646163
End: 4647455
Strand: Reverse
Name: 120612830
Synonym: Aave_4194
Alternate gene names: NA
Gene position: 4647455-4646163 (Counterclockwise)
Preceding gene: 120612839
Following gene: 120612824
Centisome position: 86.82
GC content: 74.63
Gene sequence:
>1293_bases ATGGTGATGGCGCAGCTCGCGCTGGCCGCGGGCTGGCTGGGGTGGCTCTGGCCCCTGTCACCCGCCGGGGCGTTGGCCGG CGCCGCCCTCTGGCTGGTGGGACCCCGTCTCTGGCTGGGACTGCAGTTCCTGGTCATGCTGCGTGCCAACCGGGGCGATC CGGTACCGGCCCCTCCTGCGGGGCGTGTGCTGCGTGCCTGGTGGGCGGAAACCCGGTGGGCGAGCTGGGTGTTCGGATGG TGGCAGCCCTTTCGCCATGCGGCCGTGCCGGACTGGCTGCCTCCACCCGCGGTGGCCGGCGCCACCGCGACGCCGCGCGG GGTCGTGCTGGTGCATGGATTCCTGTGCAACCGCGGCTTCTGGATGCCCTGGTTCGCGCTGCTGCGCCGCCGCGGCCATG CGTTCGTGGCCGTGACGCTGGAGCCGCCCTTCGGTGCGATCGACGATTACGCTGCCACCATCGACGCGGCCGTGCGGCGG GTGACCGAAGCCACGGGACGGCCTCCGCTCGTGATCTGCCACAGCATGGGCGGCCTTGCGGTCCGGGCCTGGCTGCGCGC CTGCGGCGAGACGGGCATCGGCCGGGTGCATCGCGTGGTCACGCTCGGCACGCCGCATGGCGGCACGGAAGCGGCCCGGC TCAGCCGCTCGGCCAACGGCCGGCAGATGGTGCCGGGGCACCCGTGGCTGCAGGCCCTGGACGCGTCCGAGCCGCCGTCC GTGCGCGCACGTTTCACCTGCTTCCATTCGGACTGCGACAACGTGGTCTATCCCGCCAGCACGGCCATGCTGGCCGGGGC GGACAACCGTTTCGTGGCCGGTGCGGCCCACGTGCACGTGGCATTCCACCCGGACGTGGTGCGTGCGTGCCTGGAAATCG CGGGGCAGCCCTGGCGACGGCTGCCCGGCTCCGCAGCGGTGCGTTTCAGGCGGCGAGCGGTTGCCGGTGCAGCAGCGTAC CGGAGCGCGCCGCCAGCAGTGCCTCCGCTGCCGGGCGCGGACTCCAGAGCGGCGTGCCATGGGTGGCCTGCCGCGAGGCG CGGGCCTGCCCCTGGGCATGGAACTGCGGCGGCAGCCGGCCATGCCGGGCGAACCCTTCCGGCCCCGCCAGCAGGCCCGC GGCGGCGCGTGGCGCCATCGAGGCGGCCGACGACGTGCGGCGCGCGACGCCGGGCACGGTGGGTTCGGGCGCGGCGGAGG GAAAGCGCCGTACCAGCGGCGCGACGGGGGCGACGCGGCCTTCCAGGGCCGCGGACGACAGGCCTGGAGGCGGACGCAAC AGATTGGATGTGA
Upstream 100 bases:
>100_bases TCTTCGCGTCTCCTGTGTGACAGGATCCGGACTGGACGAGGGCACGATCGGCCCGGCACCGGAAAGGAACGACGTGACGA ATGCAAGATGGCAGCGGTGG
Downstream 100 bases:
>100_bases TGCCGGAGACACGGGTCATGGCGGCTTCCTCGTGCAAGAAGGGGCCGGCAGCGCCGTACGGGGCGGTCCCGCGCGGCGGC GGGCGCGGCAAAAAAGGTTG
Product: acetyltransferase and hydrolase with the alpha/beta hydrolase fold-like protein
Products: NA
Alternate protein names: PGAP1 Family Protein; Lipase; LIPASE/Acetyltransferase TRANSMEMBRANE PROTEIN; Pgap1 Family Protein; PGAP1-Like Protein
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MVMAQLALAAGWLGWLWPLSPAGALAGAALWLVGPRLWLGLQFLVMLRANRGDPVPAPPAGRVLRAWWAETRWASWVFGW WQPFRHAAVPDWLPPPAVAGATATPRGVVLVHGFLCNRGFWMPWFALLRRRGHAFVAVTLEPPFGAIDDYAATIDAAVRR VTEATGRPPLVICHSMGGLAVRAWLRACGETGIGRVHRVVTLGTPHGGTEAARLSRSANGRQMVPGHPWLQALDASEPPS VRARFTCFHSDCDNVVYPASTAMLAGADNRFVAGAAHVHVAFHPDVVRACLEIAGQPWRRLPGSAAVRFRRRAVAGAAAY RSAPPAVPPLPGADSRAACHGWPAARRGPAPGHGTAAAAGHAGRTLPAPPAGPRRRVAPSRRPTTCGARRRARWVRARRR ESAVPAARRGRRGLPGPRTTGLEADATDWM
Sequences:
>Translated_430_residues MVMAQLALAAGWLGWLWPLSPAGALAGAALWLVGPRLWLGLQFLVMLRANRGDPVPAPPAGRVLRAWWAETRWASWVFGW WQPFRHAAVPDWLPPPAVAGATATPRGVVLVHGFLCNRGFWMPWFALLRRRGHAFVAVTLEPPFGAIDDYAATIDAAVRR VTEATGRPPLVICHSMGGLAVRAWLRACGETGIGRVHRVVTLGTPHGGTEAARLSRSANGRQMVPGHPWLQALDASEPPS VRARFTCFHSDCDNVVYPASTAMLAGADNRFVAGAAHVHVAFHPDVVRACLEIAGQPWRRLPGSAAVRFRRRAVAGAAAY RSAPPAVPPLPGADSRAACHGWPAARRGPAPGHGTAAAAGHAGRTLPAPPAGPRRRVAPSRRPTTCGARRRARWVRARRR ESAVPAARRGRRGLPGPRTTGLEADATDWM >Mature_430_residues MVMAQLALAAGWLGWLWPLSPAGALAGAALWLVGPRLWLGLQFLVMLRANRGDPVPAPPAGRVLRAWWAETRWASWVFGW WQPFRHAAVPDWLPPPAVAGATATPRGVVLVHGFLCNRGFWMPWFALLRRRGHAFVAVTLEPPFGAIDDYAATIDAAVRR VTEATGRPPLVICHSMGGLAVRAWLRACGETGIGRVHRVVTLGTPHGGTEAARLSRSANGRQMVPGHPWLQALDASEPPS VRARFTCFHSDCDNVVYPASTAMLAGADNRFVAGAAHVHVAFHPDVVRACLEIAGQPWRRLPGSAAVRFRRRAVAGAAAY RSAPPAVPPLPGADSRAACHGWPAARRGPAPGHGTAAAAGHAGRTLPAPPAGPRRRVAPSRRPTTCGARRRARWVRARRR ESAVPAARRGRRGLPGPRTTGLEADATDWM
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46122; Mature: 46122
Theoretical pI: Translated: 12.29; Mature: 12.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMAQLALAAGWLGWLWPLSPAGALAGAALWLVGPRLWLGLQFLVMLRANRGDPVPAPPA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH GRVLRAWWAETRWASWVFGWWQPFRHAAVPDWLPPPAVAGATATPRGVVLVHGFLCNRGF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCC WMPWFALLRRRGHAFVAVTLEPPFGAIDDYAATIDAAVRRVTEATGRPPLVICHSMGGLA CHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH VRAWLRACGETGIGRVHRVVTLGTPHGGTEAARLSRSANGRQMVPGHPWLQALDASEPPS HHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCC VRARFTCFHSDCDNVVYPASTAMLAGADNRFVAGAAHVHVAFHPDVVRACLEIAGQPWRR CEEEEEEEECCCCCEEECCCCEEEECCCCCEEEEEEEEEEEECHHHHHHHHHHCCCHHHH LPGSAAVRFRRRAVAGAAAYRSAPPAVPPLPGADSRAACHGWPAARRGPAPGHGTAAAAG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HAGRTLPAPPAGPRRRVAPSRRPTTCGARRRARWVRARRRESAVPAARRGRRGLPGPRTT CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC GLEADATDWM CCCCCCCCCC >Mature Secondary Structure MVMAQLALAAGWLGWLWPLSPAGALAGAALWLVGPRLWLGLQFLVMLRANRGDPVPAPPA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH GRVLRAWWAETRWASWVFGWWQPFRHAAVPDWLPPPAVAGATATPRGVVLVHGFLCNRGF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCC WMPWFALLRRRGHAFVAVTLEPPFGAIDDYAATIDAAVRRVTEATGRPPLVICHSMGGLA CHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH VRAWLRACGETGIGRVHRVVTLGTPHGGTEAARLSRSANGRQMVPGHPWLQALDASEPPS HHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCC VRARFTCFHSDCDNVVYPASTAMLAGADNRFVAGAAHVHVAFHPDVVRACLEIAGQPWRR CEEEEEEEECCCCCEEECCCCEEEECCCCCEEEEEEEEEEEECHHHHHHHHHHCCCHHHH LPGSAAVRFRRRAVAGAAAYRSAPPAVPPLPGADSRAACHGWPAARRGPAPGHGTAAAAG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HAGRTLPAPPAGPRRRVAPSRRPTTCGARRRARWVRARRRESAVPAARRGRRGLPGPRTT CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC GLEADATDWM CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA