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The map label for this gene is 120612756

Identifier: 120612756

GI number: 120612756

Start: 4575557

End: 4577767

Strand: Direct

Name: 120612756

Synonym: Aave_4119

Alternate gene names: NA

Gene position: 4575557-4577767 (Clockwise)

Preceding gene: 120612755

Following gene: 120612757

Centisome position: 85.48

GC content: 68.66

Gene sequence:

>2211_bases
ATGACCTGGCTGACCGCCCGCGAACTGGCCGGCCTGCCCGGGCTGCCCAGCACTGAATTTCGCACCCGCGAAAAGCTCGC
CCGCTTGGCGGTTCCGAGCCGCCCGCGTCCTGGCCGCGCAGGTGGTGGTGGCCTCGAATACGACCCGGCATCCCTGCCTG
CAGAAACCCGCGCAGCCCTGGCCGCGCGCGTCATCAGCACCAGCGGCAGCAAGGCTCTCGCCCTGGTGGAGCAGGCGCCC
GTGGTGTCCTTCGCGCCGCCTGCCCCACCTCCAGTGCCGCTCGCACCGCTGCCCGCCCCGGCCCCTGGCCGGCGCCCGCC
CAGCGACCACGACAAGGCTTGCGCCGATGCACGCATGGTGCTGATCAACCAGGTGCTCGAACTGGAAGCCATCCACGGCG
TCAAAAAGGCCTGCGCCATCCTGGCGTTGCGCCTGGCGAGCGGCGAGGCTCCGAAGGAACTGCAGGCCACCGCCCGCGCC
GCAAGCCAGCGTGCCCGCGGCGACCTGGTCAGCGCCCGGACGCTGGAACGCTACCTGTCCATCTACCGTGCCGAGGGCTG
GTGGGGACTGCTGCCTGCGCCCGCGTCCGTCGCAGCCTCCACCCATGTCGACCAGGACGTCGCCGCGGTGCTGGGCCTGT
ACCACTCCCGCGACGCGCGCTTCCGCAAGCTCAGCGGCGCGGCCAAGGAAGTCACCCGCCAGCTCGGCCGCGAGATCGAC
ACCTGGCGCGCCCTGTACGCCCGTGCACGTCGCGCTCTGGACAAGCTGGGCACGTCAGCAGAGGCGAGCGTGGCGCTCAT
CAAGGCCCGCCACAGCGGGAGCGAGCGCGACGTACGGTTGCCCTTCAAAAAGCGCGACACCAGCAGCCTATCGCCTCTGG
ACGTGTTCGTTATGGACGGCCACCAATTCAAGGCCAAGGTACGCCACCCCGACCATGGCGCGCCCTTCGCTCCTGAGCTG
ACGCTCGTCCTGGACGCCGCCACCCGGCGGATCATGGGCTGGTCTGTGTCTCTCTCCGAAAACGTGCTCGCCGTAGGCGA
CGCGCTGCGACACGCCATCGCGCAACACGGCATCCCTGCCGTTCTCTACACCGACAACGGCGCGGGTGAAACGGCGAAGG
CCATGGACTGCCCCGTCGACGGCTTTACCAAGCGCCTGGGCATCGACCACCGCACCGGCATCCCCGGCAAGCCGCAGGCC
CGCGGGATCATCGAGCGTTCGTGGCAGACCCACGCCATCAACGCCGCACGCAAGTTCGGCAGCTTCCAGGGCAGCGACGT
GGACGGGGGCGCTTTCCGGAAGGTTGCGGCGGAATTGGCGAAAGAGCAGCGCGCCCTGCGCCGTGCGCAAGAGACAGGCG
AAGTAGTCCGCCTCTCGCCCAAGTGCCCGACCTGGGCGCAATTCATCGACGAGATCGAGCGCATGGTGGCCGAATACAAC
GGCCAGCACCGCCACCGCAGCCTGCCCAAGCGGCCGGACGGCAAGCATATGACGCCCGACGAGGCCTGGGCGGCCAAGTT
CGACGCCAGCCTGCAGCACAAGCCCACCCCGGGCGAGCTGCGCGAGCTGTTCATGCCTGCGGTCCTGCGCACCGCCAAGC
GCGGCCAGGTCACGCTGTGGAATCAGGACTACCAGGCGCCGGAGTTGATGCGTCGGGACGTCGACGGCCGCGAGGTCAGC
GTCCGCTACGACATCCACGATCCGATGTGGGTACGCATCTACAGCCTGGACGGCCATTTCATCTGCGATGCGCAGTGGCA
GGCCAACCGCATCGACTTCATGCCCAAGGCGGTCGTGCAGATCGCTCGCGAGAAGCGCGTCGCCGCGACGGTCAAGCGCC
GCGAGCAGCAGATCGACATTGCATTGCGCGAGCTGGGCGACACGGTCCAACCTGCCCCCTTTTCCCTGCCGGAGCCGAGC
GCGCCATTCGTGGTCGTGCCCTCCATCCCGGAGGTTTCTCCCTCCCTCTCCTCCCTCTCTTCCTCCGGGGTCGAGGTCGC
GCAAGCGGCCTCGGGCAGGCCTTTCTTCGATTCGCTCGGCGAGCGTTACGAGTGGCTCATGGGCCACCTCGACGCCTGGG
ACGAGGACGACAGGCGCTGGGTGCAGGACTACGTCGCCAGCGACGACTACGAGGCCTTGGCCGACTACTACGAGGGGCGC
GGCCTTGGATGGCCACGCGATCCCCAGCAGGTTTTTAAGGGTGCTCTGTGA

Upstream 100 bases:

>100_bases
CTTGAGAATCAAGCCGATAACCGTCCGTGGAAGCGGGACAACTTCAGTCCAAGATTTCCGTGAGCCGCAACGGGCGCATT
CGGGCTGCGGGGGTGCAGGC

Downstream 100 bases:

>100_bases
GGCCCGCGTGAGCCGGTCGCAGAGCAGTGCAGCAGATCAACGAAGAGGAATCACCCCATGAAGACAGGGTTCGTCAAAAC
GGAGAATTTCCGCCGGTTGG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Phage Transposase; Bacteriophage Transposase; Integrase Catalytic Region; Transposase-Like Mu; Bacteriophage Transposase A Protein; Transposase A; Integrase Catalytic Subunit; Transposase/Recombinase; Phage Transposition Protein

Number of amino acids: Translated: 736; Mature: 735

Protein sequence:

>736_residues
MTWLTARELAGLPGLPSTEFRTREKLARLAVPSRPRPGRAGGGGLEYDPASLPAETRAALAARVISTSGSKALALVEQAP
VVSFAPPAPPPVPLAPLPAPAPGRRPPSDHDKACADARMVLINQVLELEAIHGVKKACAILALRLASGEAPKELQATARA
ASQRARGDLVSARTLERYLSIYRAEGWWGLLPAPASVAASTHVDQDVAAVLGLYHSRDARFRKLSGAAKEVTRQLGREID
TWRALYARARRALDKLGTSAEASVALIKARHSGSERDVRLPFKKRDTSSLSPLDVFVMDGHQFKAKVRHPDHGAPFAPEL
TLVLDAATRRIMGWSVSLSENVLAVGDALRHAIAQHGIPAVLYTDNGAGETAKAMDCPVDGFTKRLGIDHRTGIPGKPQA
RGIIERSWQTHAINAARKFGSFQGSDVDGGAFRKVAAELAKEQRALRRAQETGEVVRLSPKCPTWAQFIDEIERMVAEYN
GQHRHRSLPKRPDGKHMTPDEAWAAKFDASLQHKPTPGELRELFMPAVLRTAKRGQVTLWNQDYQAPELMRRDVDGREVS
VRYDIHDPMWVRIYSLDGHFICDAQWQANRIDFMPKAVVQIAREKRVAATVKRREQQIDIALRELGDTVQPAPFSLPEPS
APFVVVPSIPEVSPSLSSLSSSGVEVAQAASGRPFFDSLGERYEWLMGHLDAWDEDDRRWVQDYVASDDYEALADYYEGR
GLGWPRDPQQVFKGAL

Sequences:

>Translated_736_residues
MTWLTARELAGLPGLPSTEFRTREKLARLAVPSRPRPGRAGGGGLEYDPASLPAETRAALAARVISTSGSKALALVEQAP
VVSFAPPAPPPVPLAPLPAPAPGRRPPSDHDKACADARMVLINQVLELEAIHGVKKACAILALRLASGEAPKELQATARA
ASQRARGDLVSARTLERYLSIYRAEGWWGLLPAPASVAASTHVDQDVAAVLGLYHSRDARFRKLSGAAKEVTRQLGREID
TWRALYARARRALDKLGTSAEASVALIKARHSGSERDVRLPFKKRDTSSLSPLDVFVMDGHQFKAKVRHPDHGAPFAPEL
TLVLDAATRRIMGWSVSLSENVLAVGDALRHAIAQHGIPAVLYTDNGAGETAKAMDCPVDGFTKRLGIDHRTGIPGKPQA
RGIIERSWQTHAINAARKFGSFQGSDVDGGAFRKVAAELAKEQRALRRAQETGEVVRLSPKCPTWAQFIDEIERMVAEYN
GQHRHRSLPKRPDGKHMTPDEAWAAKFDASLQHKPTPGELRELFMPAVLRTAKRGQVTLWNQDYQAPELMRRDVDGREVS
VRYDIHDPMWVRIYSLDGHFICDAQWQANRIDFMPKAVVQIAREKRVAATVKRREQQIDIALRELGDTVQPAPFSLPEPS
APFVVVPSIPEVSPSLSSLSSSGVEVAQAASGRPFFDSLGERYEWLMGHLDAWDEDDRRWVQDYVASDDYEALADYYEGR
GLGWPRDPQQVFKGAL
>Mature_735_residues
TWLTARELAGLPGLPSTEFRTREKLARLAVPSRPRPGRAGGGGLEYDPASLPAETRAALAARVISTSGSKALALVEQAPV
VSFAPPAPPPVPLAPLPAPAPGRRPPSDHDKACADARMVLINQVLELEAIHGVKKACAILALRLASGEAPKELQATARAA
SQRARGDLVSARTLERYLSIYRAEGWWGLLPAPASVAASTHVDQDVAAVLGLYHSRDARFRKLSGAAKEVTRQLGREIDT
WRALYARARRALDKLGTSAEASVALIKARHSGSERDVRLPFKKRDTSSLSPLDVFVMDGHQFKAKVRHPDHGAPFAPELT
LVLDAATRRIMGWSVSLSENVLAVGDALRHAIAQHGIPAVLYTDNGAGETAKAMDCPVDGFTKRLGIDHRTGIPGKPQAR
GIIERSWQTHAINAARKFGSFQGSDVDGGAFRKVAAELAKEQRALRRAQETGEVVRLSPKCPTWAQFIDEIERMVAEYNG
QHRHRSLPKRPDGKHMTPDEAWAAKFDASLQHKPTPGELRELFMPAVLRTAKRGQVTLWNQDYQAPELMRRDVDGREVSV
RYDIHDPMWVRIYSLDGHFICDAQWQANRIDFMPKAVVQIAREKRVAATVKRREQQIDIALRELGDTVQPAPFSLPEPSA
PFVVVPSIPEVSPSLSSLSSSGVEVAQAASGRPFFDSLGERYEWLMGHLDAWDEDDRRWVQDYVASDDYEALADYYEGRG
LGWPRDPQQVFKGAL

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80910; Mature: 80779

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWLTARELAGLPGLPSTEFRTREKLARLAVPSRPRPGRAGGGGLEYDPASLPAETRAAL
CCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AARVISTSGSKALALVEQAPVVSFAPPAPPPVPLAPLPAPAPGRRPPSDHDKACADARMV
HHHHHHCCCCCEEEEHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LINQVLELEAIHGVKKACAILALRLASGEAPKELQATARAASQRARGDLVSARTLERYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IYRAEGWWGLLPAPASVAASTHVDQDVAAVLGLYHSRDARFRKLSGAAKEVTRQLGREID
HHHCCCCEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
TWRALYARARRALDKLGTSAEASVALIKARHSGSERDVRLPFKKRDTSSLSPLDVFVMDG
HHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCEECCCCCCCCCCCCCEEEEEECC
HQFKAKVRHPDHGAPFAPELTLVLDAATRRIMGWSVSLSENVLAVGDALRHAIAQHGIPA
CEEEEEECCCCCCCCCCCCHHEEEHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCE
VLYTDNGAGETAKAMDCPVDGFTKRLGIDHRTGIPGKPQARGIIERSWQTHAINAARKFG
EEEECCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHC
SFQGSDVDGGAFRKVAAELAKEQRALRRAQETGEVVRLSPKCPTWAQFIDEIERMVAEYN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHC
GQHRHRSLPKRPDGKHMTPDEAWAAKFDASLQHKPTPGELRELFMPAVLRTAKRGQVTLW
CCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
NQDYQAPELMRRDVDGREVSVRYDIHDPMWVRIYSLDGHFICDAQWQANRIDFMPKAVVQ
CCCCCCHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHH
IAREKRVAATVKRREQQIDIALRELGDTVQPAPFSLPEPSAPFVVVPSIPEVSPSLSSLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHH
SSGVEVAQAASGRPFFDSLGERYEWLMGHLDAWDEDDRRWVQDYVASDDYEALADYYEGR
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC
GLGWPRDPQQVFKGAL
CCCCCCCHHHHHCCCC
>Mature Secondary Structure 
TWLTARELAGLPGLPSTEFRTREKLARLAVPSRPRPGRAGGGGLEYDPASLPAETRAAL
CCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AARVISTSGSKALALVEQAPVVSFAPPAPPPVPLAPLPAPAPGRRPPSDHDKACADARMV
HHHHHHCCCCCEEEEHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LINQVLELEAIHGVKKACAILALRLASGEAPKELQATARAASQRARGDLVSARTLERYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IYRAEGWWGLLPAPASVAASTHVDQDVAAVLGLYHSRDARFRKLSGAAKEVTRQLGREID
HHHCCCCEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
TWRALYARARRALDKLGTSAEASVALIKARHSGSERDVRLPFKKRDTSSLSPLDVFVMDG
HHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCEECCCCCCCCCCCCCEEEEEECC
HQFKAKVRHPDHGAPFAPELTLVLDAATRRIMGWSVSLSENVLAVGDALRHAIAQHGIPA
CEEEEEECCCCCCCCCCCCHHEEEHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCE
VLYTDNGAGETAKAMDCPVDGFTKRLGIDHRTGIPGKPQARGIIERSWQTHAINAARKFG
EEEECCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHC
SFQGSDVDGGAFRKVAAELAKEQRALRRAQETGEVVRLSPKCPTWAQFIDEIERMVAEYN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHC
GQHRHRSLPKRPDGKHMTPDEAWAAKFDASLQHKPTPGELRELFMPAVLRTAKRGQVTLW
CCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
NQDYQAPELMRRDVDGREVSVRYDIHDPMWVRIYSLDGHFICDAQWQANRIDFMPKAVVQ
CCCCCCHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHH
IAREKRVAATVKRREQQIDIALRELGDTVQPAPFSLPEPSAPFVVVPSIPEVSPSLSSLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHH
SSGVEVAQAASGRPFFDSLGERYEWLMGHLDAWDEDDRRWVQDYVASDDYEALADYYEGR
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC
GLGWPRDPQQVFKGAL
CCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA