Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612738
Identifier: 120612738
GI number: 120612738
Start: 4559087
End: 4559596
Strand: Reverse
Name: 120612738
Synonym: Aave_4101
Alternate gene names: NA
Gene position: 4559596-4559087 (Counterclockwise)
Preceding gene: 120612739
Following gene: 120612737
Centisome position: 85.18
GC content: 69.02
Gene sequence:
>510_bases ATGCCGAACACCCTGGCCGAGTCGCGCTCTGCGTTGCAGGCCGTCCTGCAGGCCGTGCCTGCCGTTGGCGTGGTGCACGC CTGCGAACGCTTTGCGGAGGGCGAGGAGGCTTTTAAAACGGCCTACCTCTACACGCACGCCGACCCGGCCGCCGATGCCT TCGCCGCAGCCCCGCACATCCGGGGCTGGTACATCCGGCGCACGGCCACGGCCGAGGTCAACACCAACGGTCGCATCCTG AACGAGCACACCTGGCTGGTGCGCGGCTACCTCGCGTTCAGGGACGCGATCAGCAGCGAGCTGATTTTCGACGACCTCAT CGAGCGCATGCGCGATGCGGTGCGCGTGGACGGCTCCCTGGGTCTGCCTGGCCTGCTGGGCTCCAGCGTCGCCGATGAGC GCGGCGTGCAGGTCGAGAGCGCGGGGCCGGTGTACTTCGCGGGCGTGCTGTGTCACAGCGCCGCCCTGCGCCTCAAGACC CGCAACTGGGCCGAATGGAGGCGACCATGA
Upstream 100 bases:
>100_bases TGGCGCGCGCTGCGCAGGCCACCGAAGGGCAGATCGTGGCGATGTTTGAACGTGCGGCCGACCGGGTCGCGAAGTATCTC GAAGGGACCGCCTCGTGAGC
Downstream 100 bases:
>100_bases GGCCACGGAGGAAGGTGCAGGCGGCGCCCCCGCCGGCCGCGGAGCCGGAGCGCGTGGTCCTGGCTCGCGAGCACGAACAC CAGGGCAAGAAAAGGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPNTLAESRSALQAVLQAVPAVGVVHACERFAEGEEAFKTAYLYTHADPAADAFAAAPHIRGWYIRRTATAEVNTNGRIL NEHTWLVRGYLAFRDAISSELIFDDLIERMRDAVRVDGSLGLPGLLGSSVADERGVQVESAGPVYFAGVLCHSAALRLKT RNWAEWRRP
Sequences:
>Translated_169_residues MPNTLAESRSALQAVLQAVPAVGVVHACERFAEGEEAFKTAYLYTHADPAADAFAAAPHIRGWYIRRTATAEVNTNGRIL NEHTWLVRGYLAFRDAISSELIFDDLIERMRDAVRVDGSLGLPGLLGSSVADERGVQVESAGPVYFAGVLCHSAALRLKT RNWAEWRRP >Mature_168_residues PNTLAESRSALQAVLQAVPAVGVVHACERFAEGEEAFKTAYLYTHADPAADAFAAAPHIRGWYIRRTATAEVNTNGRILN EHTWLVRGYLAFRDAISSELIFDDLIERMRDAVRVDGSLGLPGLLGSSVADERGVQVESAGPVYFAGVLCHSAALRLKTR NWAEWRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18550; Mature: 18419
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTLAESRSALQAVLQAVPAVGVVHACERFAEGEEAFKTAYLYTHADPAADAFAAAPHI CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHEEECCCCHHHHHHCCCCC RGWYIRRTATAEVNTNGRILNEHTWLVRGYLAFRDAISSELIFDDLIERMRDAVRVDGSL CCEEEEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GLPGLLGSSVADERGVQVESAGPVYFAGVLCHSAALRLKTRNWAEWRRP CCCCHHCCCCHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PNTLAESRSALQAVLQAVPAVGVVHACERFAEGEEAFKTAYLYTHADPAADAFAAAPHI CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHEEECCCCHHHHHHCCCCC RGWYIRRTATAEVNTNGRILNEHTWLVRGYLAFRDAISSELIFDDLIERMRDAVRVDGSL CCEEEEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GLPGLLGSSVADERGVQVESAGPVYFAGVLCHSAALRLKTRNWAEWRRP CCCCHHCCCCHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA