Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612737
Identifier: 120612737
GI number: 120612737
Start: 4557888
End: 4558904
Strand: Reverse
Name: 120612737
Synonym: Aave_4100
Alternate gene names: NA
Gene position: 4558904-4557888 (Counterclockwise)
Preceding gene: 120612738
Following gene: 120612736
Centisome position: 85.17
GC content: 67.06
Gene sequence:
>1017_bases ATGGCTTCCTCATCCCAGATCATCAAACGCATCTTTTCGCCCACCGCTCTGGTGGGCCAGGTCTACGCCCGTGAGCGCGG CTCCACGCAGCTCCCCATGCCGCTGGGCAACGTGCTCGAGCTGGAGCTGACGCACAAGGAAAACGTGATCAAGCAGCCGG ACATGACGGCCCTGGGCGGCGGCACGCACGCGGAGATGCGCCGCGTGGAGGAGGTCGAAATCAGCATGAAGCTCGCGGAC CTCAACGTGACCAACCAGGCCCGGGCCATGCTGGGCACGGTGCGTGGGGTGGAAGCCGGCTCGGCCAGCAACGAGGCCCA CACCGTGATGCGTGGAGGCCTGCTGCGTACCGAGCACATCAACCCGAAAGACGTGGTGGTGACCAAGGGCACGGCTGCAG GCACTGCCACGGTGACCGACGAGGAGCACCTCAACGTCACCAAGGGCGCTCTGGTGCCGCTCGCGCACCTGACGTCCGCG CCGGCAACGGGCGTGACCGTGCGCATGGGGACGAGCGTCGCCAGCGCTACGCCGCTCACGGCTGCGGGCAACTACACCGT GGTGGCCGGGGGCATCCAAGTGGCCGCGAACGCCACCGACGTGGTCGACGGCACTGGCTTCTGGGTGTCCTATACGTATG CGACCGTGGGCACTGTGGTGTCCGCCACCGGCACTTACGAAGTGCGCCCGGCCGGTGTTTTCATCCTGCCCGAGGCCGCC GGCCTGGCCGATGGTGACCAGGTCAAGCTGGCCTACACGTATGGCAGCTACGCCGTGATCGAGGCCCTGACCACCAAGGC CAAGGAACTGGAGCTGATCTTCGAGGGGCTCAACGAGGCGGACGACGGCAAGGCAAAGATCGTGGAGATCTGGCGCGCCA GCCAGGGTGTGGCCTCGGCCATCGGGCTGCTGGCGGACAAGGGCTTCGCCAGCCTGCCCGTGACGGGCGCGGTGCTCAAG GACGACACCAAGACCGGGGACGGCATCAGCCGGTACTACCGCGTGCGCACGGTTTAA
Upstream 100 bases:
>100_bases GGGCAAGAAAAGGCCCGCTGGCACCGAGCTGCTGGTGCACCCCGAAACCGCCCGGTGGCTGCGTGCTGCCGGTGTCATTG CAACCCCGAAGGACTGAACC
Downstream 100 bases:
>100_bases ACGCAGCGCGTTTCCTCCTCCCCCAAAAGCAAAGGCCGACATACGTCGGCCTTATTTTTTTGCCCGTCGCGCGAGACAGT AGCTGTCATGGCGAGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MASSSQIIKRIFSPTALVGQVYARERGSTQLPMPLGNVLELELTHKENVIKQPDMTALGGGTHAEMRRVEEVEISMKLAD LNVTNQARAMLGTVRGVEAGSASNEAHTVMRGGLLRTEHINPKDVVVTKGTAAGTATVTDEEHLNVTKGALVPLAHLTSA PATGVTVRMGTSVASATPLTAAGNYTVVAGGIQVAANATDVVDGTGFWVSYTYATVGTVVSATGTYEVRPAGVFILPEAA GLADGDQVKLAYTYGSYAVIEALTTKAKELELIFEGLNEADDGKAKIVEIWRASQGVASAIGLLADKGFASLPVTGAVLK DDTKTGDGISRYYRVRTV
Sequences:
>Translated_338_residues MASSSQIIKRIFSPTALVGQVYARERGSTQLPMPLGNVLELELTHKENVIKQPDMTALGGGTHAEMRRVEEVEISMKLAD LNVTNQARAMLGTVRGVEAGSASNEAHTVMRGGLLRTEHINPKDVVVTKGTAAGTATVTDEEHLNVTKGALVPLAHLTSA PATGVTVRMGTSVASATPLTAAGNYTVVAGGIQVAANATDVVDGTGFWVSYTYATVGTVVSATGTYEVRPAGVFILPEAA GLADGDQVKLAYTYGSYAVIEALTTKAKELELIFEGLNEADDGKAKIVEIWRASQGVASAIGLLADKGFASLPVTGAVLK DDTKTGDGISRYYRVRTV >Mature_337_residues ASSSQIIKRIFSPTALVGQVYARERGSTQLPMPLGNVLELELTHKENVIKQPDMTALGGGTHAEMRRVEEVEISMKLADL NVTNQARAMLGTVRGVEAGSASNEAHTVMRGGLLRTEHINPKDVVVTKGTAAGTATVTDEEHLNVTKGALVPLAHLTSAP ATGVTVRMGTSVASATPLTAAGNYTVVAGGIQVAANATDVVDGTGFWVSYTYATVGTVVSATGTYEVRPAGVFILPEAAG LADGDQVKLAYTYGSYAVIEALTTKAKELELIFEGLNEADDGKAKIVEIWRASQGVASAIGLLADKGFASLPVTGAVLKD DTKTGDGISRYYRVRTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35305; Mature: 35173
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSSQIIKRIFSPTALVGQVYARERGSTQLPMPLGNVLELELTHKENVIKQPDMTALGG CCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECC GTHAEMRRVEEVEISMKLADLNVTNQARAMLGTVRGVEAGSASNEAHTVMRGGLLRTEHI CCHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEECCC NPKDVVVTKGTAAGTATVTDEEHLNVTKGALVPLAHLTSAPATGVTVRMGTSVASATPLT CCCCEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCEE AAGNYTVVAGGIQVAANATDVVDGTGFWVSYTYATVGTVVSATGTYEVRPAGVFILPEAA ECCCEEEEECCEEEECCCCCCCCCCCEEEEEEHHHHHHEEECCCCEEECCCCEEEEECCC GLADGDQVKLAYTYGSYAVIEALTTKAKELELIFEGLNEADDGKAKIVEIWRASQGVASA CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCCHHHHH IGLLADKGFASLPVTGAVLKDDTKTGDGISRYYRVRTV HHHHHCCCCCCCCCCCEEEECCCCCCCCHHHEEEEECC >Mature Secondary Structure ASSSQIIKRIFSPTALVGQVYARERGSTQLPMPLGNVLELELTHKENVIKQPDMTALGG CCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECC GTHAEMRRVEEVEISMKLADLNVTNQARAMLGTVRGVEAGSASNEAHTVMRGGLLRTEHI CCHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEECCC NPKDVVVTKGTAAGTATVTDEEHLNVTKGALVPLAHLTSAPATGVTVRMGTSVASATPLT CCCCEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCEE AAGNYTVVAGGIQVAANATDVVDGTGFWVSYTYATVGTVVSATGTYEVRPAGVFILPEAA ECCCEEEEECCEEEECCCCCCCCCCCEEEEEEHHHHHHEEECCCCEEECCCCEEEEECCC GLADGDQVKLAYTYGSYAVIEALTTKAKELELIFEGLNEADDGKAKIVEIWRASQGVASA CCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCCHHHHH IGLLADKGFASLPVTGAVLKDDTKTGDGISRYYRVRTV HHHHHCCCCCCCCCCCEEEECCCCCCCCHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA