Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612705
Identifier: 120612705
GI number: 120612705
Start: 4520638
End: 4521585
Strand: Reverse
Name: 120612705
Synonym: Aave_4068
Alternate gene names: NA
Gene position: 4521585-4520638 (Counterclockwise)
Preceding gene: 120612706
Following gene: 120612697
Centisome position: 84.47
GC content: 66.56
Gene sequence:
>948_bases TTGGATCCAGTGGGTGCGGCAGCCGCTCTCGCGCCCGCCCTCTCGGCACGGGCCCAGAGCTTTCCAGCACGCCCGGTCAA ACTGGTCGTCGCTTTTCCTGCGGGCGGCCCCACCGACATCACCATGCGGGTGCTCGCCGAGAATGCATCCAAGGTGCTGG GCCAGCCGGTCATCATCGACAACAAGCCGGGAGCCGGAGGTACGCTGCCCGCGCAGATGCTGCAGTCCTCGCCGGCGGAC GGCTACACGGTCGCGCAGATCCCGCTCGGGGTCTTCCGCATGCCCTACACCACGAAGATCAACTGGGATCCCGTCAAGGA CATCAACTACGTGATCAACGTGACGGGCTACGCATTCGGCGTGGTCGTCCCGACCGACTCTCCCTTCAAGACCTGGGCGG ACTTCGTGGCCTACGCCAAGGCGAACCCCGGAAAGCTCAGCTACGGCTCCACCGGGGCGTTGACGAGCCCGCACCTGACG ATGGAGCGGGTGGCCCAGCAGCTCGGCCTGCAACTGCTGCACGTGCCCTACAAGGGCAGCGCGGACCTCATGCAGGCCAT CCTCGGCGGGCAGCTCATGGCGGCAGCCGATTCCACGGGGTTCGCGCCGCAGGTGGAGGCCGGCAAGCTGCGGGTGCTCA ATACCTGGGGCGCGGAGCGGCTGGCGAAGTTCCCGGACGCGCCCACGCTCAAGGAACTGGGTATCGACATCGTGCAGAAC TCGCCGTTCGGCATCGGTGCTCCGAAGGGAACGCCCCCGGACGTCGTCCGCCGGCTGCACGATGCCTTCAAGGCCGCCAT GGACCAGGAGAACTACCGCAGCGCACTGGCGCGCTACGACATGGTGCCCATCTACATGGACACGGCGGCATACCGCCAAT TCGCCCAGGATACCTATTCGCGGGAAAAGGCCATCATCGAGCGTCTGGGCCTGGCCAAGCCTGCGTGA
Upstream 100 bases:
>100_bases TCAGGGTTTGCGGCGTTGGCACGCCGGACAGGCCGCGGTGCAATAGTCCGATCCATTTCTTCCCGTTTTCTTCAGGAGTT ACGTACATGCAGCGACGTCG
Downstream 100 bases:
>100_bases TCCGAAGCGGTCTCCGCCGGGGCCCGGCCGCGGAGCTCAGGCGGTGGCCCTGCCGGCCTGCAGTATCGCGCGCGCCACTT CGGCGAAGCCGGCACCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIIDNKPGAGGTLPAQMLQSSPAD GYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFGVVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLT MERVAQQLGLQLLHVPYKGSADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYSREKAIIERLGLAKPA
Sequences:
>Translated_315_residues MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIIDNKPGAGGTLPAQMLQSSPAD GYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFGVVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLT MERVAQQLGLQLLHVPYKGSADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYSREKAIIERLGLAKPA >Mature_315_residues MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIIDNKPGAGGTLPAQMLQSSPAD GYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFGVVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLT MERVAQQLGLQLLHVPYKGSADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYSREKAIIERLGLAKPA
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33601; Mature: 33601
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIID CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE NKPGAGGTLPAQMLQSSPADGYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFG CCCCCCCCCHHHHHHCCCCCCEEEEECCHHHEECCCEEECCCCCCCCCEEEEEECCEEEE VVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLTMERVAQQLGLQLLHVPYKGS EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCC ADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN HHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHCCEEECC SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYS CCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHH REKAIIERLGLAKPA HHHHHHHHHCCCCCC >Mature Secondary Structure MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIID CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE NKPGAGGTLPAQMLQSSPADGYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFG CCCCCCCCCHHHHHHCCCCCCEEEEECCHHHEECCCEEECCCCCCCCCEEEEEECCEEEE VVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLTMERVAQQLGLQLLHVPYKGS EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCC ADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN HHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHCCEEECC SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYS CCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHH REKAIIERLGLAKPA HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]