Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612705

Identifier: 120612705

GI number: 120612705

Start: 4520638

End: 4521585

Strand: Reverse

Name: 120612705

Synonym: Aave_4068

Alternate gene names: NA

Gene position: 4521585-4520638 (Counterclockwise)

Preceding gene: 120612706

Following gene: 120612697

Centisome position: 84.47

GC content: 66.56

Gene sequence:

>948_bases
TTGGATCCAGTGGGTGCGGCAGCCGCTCTCGCGCCCGCCCTCTCGGCACGGGCCCAGAGCTTTCCAGCACGCCCGGTCAA
ACTGGTCGTCGCTTTTCCTGCGGGCGGCCCCACCGACATCACCATGCGGGTGCTCGCCGAGAATGCATCCAAGGTGCTGG
GCCAGCCGGTCATCATCGACAACAAGCCGGGAGCCGGAGGTACGCTGCCCGCGCAGATGCTGCAGTCCTCGCCGGCGGAC
GGCTACACGGTCGCGCAGATCCCGCTCGGGGTCTTCCGCATGCCCTACACCACGAAGATCAACTGGGATCCCGTCAAGGA
CATCAACTACGTGATCAACGTGACGGGCTACGCATTCGGCGTGGTCGTCCCGACCGACTCTCCCTTCAAGACCTGGGCGG
ACTTCGTGGCCTACGCCAAGGCGAACCCCGGAAAGCTCAGCTACGGCTCCACCGGGGCGTTGACGAGCCCGCACCTGACG
ATGGAGCGGGTGGCCCAGCAGCTCGGCCTGCAACTGCTGCACGTGCCCTACAAGGGCAGCGCGGACCTCATGCAGGCCAT
CCTCGGCGGGCAGCTCATGGCGGCAGCCGATTCCACGGGGTTCGCGCCGCAGGTGGAGGCCGGCAAGCTGCGGGTGCTCA
ATACCTGGGGCGCGGAGCGGCTGGCGAAGTTCCCGGACGCGCCCACGCTCAAGGAACTGGGTATCGACATCGTGCAGAAC
TCGCCGTTCGGCATCGGTGCTCCGAAGGGAACGCCCCCGGACGTCGTCCGCCGGCTGCACGATGCCTTCAAGGCCGCCAT
GGACCAGGAGAACTACCGCAGCGCACTGGCGCGCTACGACATGGTGCCCATCTACATGGACACGGCGGCATACCGCCAAT
TCGCCCAGGATACCTATTCGCGGGAAAAGGCCATCATCGAGCGTCTGGGCCTGGCCAAGCCTGCGTGA

Upstream 100 bases:

>100_bases
TCAGGGTTTGCGGCGTTGGCACGCCGGACAGGCCGCGGTGCAATAGTCCGATCCATTTCTTCCCGTTTTCTTCAGGAGTT
ACGTACATGCAGCGACGTCG

Downstream 100 bases:

>100_bases
TCCGAAGCGGTCTCCGCCGGGGCCCGGCCGCGGAGCTCAGGCGGTGGCCCTGCCGGCCTGCAGTATCGCGCGCGCCACTT
CGGCGAAGCCGGCACCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIIDNKPGAGGTLPAQMLQSSPAD
GYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFGVVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLT
MERVAQQLGLQLLHVPYKGSADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN
SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYSREKAIIERLGLAKPA

Sequences:

>Translated_315_residues
MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIIDNKPGAGGTLPAQMLQSSPAD
GYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFGVVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLT
MERVAQQLGLQLLHVPYKGSADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN
SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYSREKAIIERLGLAKPA
>Mature_315_residues
MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIIDNKPGAGGTLPAQMLQSSPAD
GYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFGVVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLT
MERVAQQLGLQLLHVPYKGSADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN
SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYSREKAIIERLGLAKPA

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064
- InterPro:   IPR006311 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33601; Mature: 33601

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIID
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE
NKPGAGGTLPAQMLQSSPADGYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFG
CCCCCCCCCHHHHHHCCCCCCEEEEECCHHHEECCCEEECCCCCCCCCEEEEEECCEEEE
VVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLTMERVAQQLGLQLLHVPYKGS
EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCC
ADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN
HHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHCCEEECC
SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYS
CCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHH
REKAIIERLGLAKPA
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MDPVGAAAALAPALSARAQSFPARPVKLVVAFPAGGPTDITMRVLAENASKVLGQPVIID
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE
NKPGAGGTLPAQMLQSSPADGYTVAQIPLGVFRMPYTTKINWDPVKDINYVINVTGYAFG
CCCCCCCCCHHHHHHCCCCCCEEEEECCHHHEECCCEEECCCCCCCCCEEEEEECCEEEE
VVVPTDSPFKTWADFVAYAKANPGKLSYGSTGALTSPHLTMERVAQQLGLQLLHVPYKGS
EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCC
ADLMQAILGGQLMAAADSTGFAPQVEAGKLRVLNTWGAERLAKFPDAPTLKELGIDIVQN
HHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCHHHHCCEEECC
SPFGIGAPKGTPPDVVRRLHDAFKAAMDQENYRSALARYDMVPIYMDTAAYRQFAQDTYS
CCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHH
REKAIIERLGLAKPA
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7851418 [H]