Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ahcY [H]
Identifier: 120612697
GI number: 120612697
Start: 4510367
End: 4511794
Strand: Reverse
Name: ahcY [H]
Synonym: Aave_4060
Alternate gene names: 120612697
Gene position: 4511794-4510367 (Counterclockwise)
Preceding gene: 120612705
Following gene: 120612696
Centisome position: 84.29
GC content: 64.92
Gene sequence:
>1428_bases ATGAGCGCAGTTCTCAAGCCCCAGGCCGACCTGGCCATTGCCGACATTTCCCTGGCCGACTGGGGCCGCAAGGAAATCAA GATCGCCGAAACCGAGATGCCCGGCCTGATGGCCATCCGCGAGGAATTCGCGGCGGCGCAGCCCCTCAAGGGCGCGCGCA TCACCGGCTCGCTGCACATGACCATCCAGACGGCCGTGCTGATCGAGACGCTGAAGGCCCTGGGCGCCGACGTGCGCTGG GCCTCGTGCAACATATTCTCCACGCAGGACCACGCCGCCGCCGCCATCGCCGCGGGCGGCACGCCGGTGTTCGCCATAAA GGGCGAATCGCTGGAAGACTACTGGGACTACACCCACCGCATCTTCGACTTCGGCGCCAAGGGTACGCCGGGCGAAGGCC CGAACATGATCCTGGACGACGGCGGCGACGCCACGCTGCTGATGCACCTGGGCCAGCGCGCCGAGAAGGATCTGTCCGTG GTGGCCAACCCCACGAGCGAAGAAGAGCGCATCCTGTTCGCCGCCATCAAGGCCAAGATCGCGCAGGATCCGACCTGGTA CACCCGCAAGTCGGCCGAGATCATCGGCGTGACGGAAGAAACGACGACCGGCGTGCACCGTCTGAACGAGATGTCCGCCA AGGGCACGCTGCTGTTCCGCGCGATCAACGTGAACGACTCGGTCACGAAGTCGAAGTTCGACAACCTCTACGGCTGCCGC GAATCGCTGGTGGACGGCATCAAGCGCGCCACCGACGTGATGATCGCCGGCAAGGTGGCCCTGGTGGCCGGCTACGGCGA CGTGGGCAAGGGCTGCGCCCAGGCCCTGGCCGCCCTGCGCGCCCAGGTGTGGGTGACCGAGATCGACCCCATCAACGCCC TGCAGGCCGCGATGGAAGGCTACAAGGTCGTGACGATGGAATACGCCGCCGACAAGGCCGACATCTTCGTGACCACCACC GGCAACAAGGACGTGATCCGCCACGAGCACATGGTGGCCATGAAGAACGAGGCCATCGTCTGCAACATCGGCCACTTCGA CAACGAGATCGACGTCGCCTCGATCGAGAAGTACCGGTGGGAAGAGGTGAAGCCGCAGGTGGACCACGTGATCTTCCCGG ACGGCAAGCGCATCACCCTGCTGGCCAAGGGCCGCCTGGTGAACCTGGGCTGCGCCACGGGCCATCCGAGCTTCGTGATG TCGTCCTCCTTCGCCAACCAGACCATCGCGCAGATCGAACTGTTCACCAAGCCCGACGCCTACCAGGCCGGCAAGGTCTA TGTGCTGCCCAAGGTGCTGGACGAGAAGGTCGCACGCCTGCACCTGAAGAAGGTCGGCGCCCAGCTCACCGAGCTGACCG ATGCGCAGGCCGCCTATATCGGCGTGAAGAAGGAAGGCCCTTACAAGGCCGACACGTATAGGTACTGA
Upstream 100 bases:
>100_bases CGGGTCATCATTTTGCAACGACGCTCGCCCACGCTGTCCGGTGCGGTGAGCGAGCCATTGGCCGAACGCGTGGTTTTTGA ACTCTTCAACGGAGAAAACC
Downstream 100 bases:
>100_bases CATCCCCCTGAGGCGCCAGTGGCCCGGCGGAGCCGGTTCCACGGCGTCTGCTGGCGTGGGGGCGTGCGGGTGCCTGGCGA ACAGCAAGCGCTGAGGACCG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MSAVLKPQADLAIADISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRW ASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHRIFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEKDLSV VANPTSEEERILFAAIKAKIAQDPTWYTRKSAEIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDSVTKSKFDNLYGCR ESLVDGIKRATDVMIAGKVALVAGYGDVGKGCAQALAALRAQVWVTEIDPINALQAAMEGYKVVTMEYAADKADIFVTTT GNKDVIRHEHMVAMKNEAIVCNIGHFDNEIDVASIEKYRWEEVKPQVDHVIFPDGKRITLLAKGRLVNLGCATGHPSFVM SSSFANQTIAQIELFTKPDAYQAGKVYVLPKVLDEKVARLHLKKVGAQLTELTDAQAAYIGVKKEGPYKADTYRY
Sequences:
>Translated_475_residues MSAVLKPQADLAIADISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRW ASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHRIFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEKDLSV VANPTSEEERILFAAIKAKIAQDPTWYTRKSAEIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDSVTKSKFDNLYGCR ESLVDGIKRATDVMIAGKVALVAGYGDVGKGCAQALAALRAQVWVTEIDPINALQAAMEGYKVVTMEYAADKADIFVTTT GNKDVIRHEHMVAMKNEAIVCNIGHFDNEIDVASIEKYRWEEVKPQVDHVIFPDGKRITLLAKGRLVNLGCATGHPSFVM SSSFANQTIAQIELFTKPDAYQAGKVYVLPKVLDEKVARLHLKKVGAQLTELTDAQAAYIGVKKEGPYKADTYRY >Mature_474_residues SAVLKPQADLAIADISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHMTIQTAVLIETLKALGADVRWA SCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHRIFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEKDLSVV ANPTSEEERILFAAIKAKIAQDPTWYTRKSAEIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDSVTKSKFDNLYGCRE SLVDGIKRATDVMIAGKVALVAGYGDVGKGCAQALAALRAQVWVTEIDPINALQAAMEGYKVVTMEYAADKADIFVTTTG NKDVIRHEHMVAMKNEAIVCNIGHFDNEIDVASIEKYRWEEVKPQVDHVIFPDGKRITLLAKGRLVNLGCATGHPSFVMS SSFANQTIAQIELFTKPDAYQAGKVYVLPKVLDEKVARLHLKKVGAQLTELTDAQAAYIGVKKEGPYKADTYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=466, Percent_Identity=59.2274678111588, Blast_Score=510, Evalue=1e-145, Organism=Homo sapiens, GI239937451, Length=446, Percent_Identity=58.9686098654709, Blast_Score=484, Evalue=1e-137, Organism=Homo sapiens, GI298286489, Length=472, Percent_Identity=49.5762711864407, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI195539349, Length=472, Percent_Identity=49.5762711864407, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI195539337, Length=472, Percent_Identity=49.5762711864407, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI24308043, Length=472, Percent_Identity=49.5762711864407, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI21361647, Length=472, Percent_Identity=48.0932203389831, Blast_Score=429, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17506425, Length=468, Percent_Identity=59.4017094017094, Blast_Score=520, Evalue=1e-148, Organism=Saccharomyces cerevisiae, GI6320882, Length=486, Percent_Identity=57.6131687242798, Blast_Score=509, Evalue=1e-145, Organism=Drosophila melanogaster, GI24642172, Length=465, Percent_Identity=60.4301075268817, Blast_Score=516, Evalue=1e-146, Organism=Drosophila melanogaster, GI24656245, Length=473, Percent_Identity=49.0486257928118, Blast_Score=439, Evalue=1e-123, Organism=Drosophila melanogaster, GI45553387, Length=468, Percent_Identity=48.2905982905983, Blast_Score=414, Evalue=1e-116, Organism=Drosophila melanogaster, GI45553385, Length=467, Percent_Identity=48.1798715203426, Blast_Score=412, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51693; Mature: 51562
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVLKPQADLAIADISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHM CCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEE TIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHR EHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHH IFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEKDLSVVANPTSEEERILFAAIKAKI HHHCCCCCCCCCCCCEEEECCCCEEEEEHHCCCCCCCCEEEECCCCCHHHEEHEEHHHHH AQDPTWYTRKSAEIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDSVTKSKFDNLYGCR CCCCCCEECCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHH ESLVDGIKRATDVMIAGKVALVAGYGDVGKGCAQALAALRAQVWVTEIDPINALQAAMEG HHHHHHHHHHHHEEEECCEEEEECCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHCC YKVVTMEYAADKADIFVTTTGNKDVIRHEHMVAMKNEAIVCNIGHFDNEIDVASIEKYRW CEEEEEEECCCCCCEEEEECCCCCHHHHHHEEEECCCEEEEEECCCCCCCCHHHHHHHHH EEVKPQVDHVIFPDGKRITLLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELFTKPDA HHCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCCEEECCCCCCEEEEEEEEECCCC YQAGKVYVLPKVLDEKVARLHLKKVGAQLTELTDAQAAYIGVKKEGPYKADTYRY CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure SAVLKPQADLAIADISLADWGRKEIKIAETEMPGLMAIREEFAAAQPLKGARITGSLHM CCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEE TIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKGESLEDYWDYTHR EHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHH IFDFGAKGTPGEGPNMILDDGGDATLLMHLGQRAEKDLSVVANPTSEEERILFAAIKAKI HHHCCCCCCCCCCCCEEEECCCCEEEEEHHCCCCCCCCEEEECCCCCHHHEEHEEHHHHH AQDPTWYTRKSAEIIGVTEETTTGVHRLNEMSAKGTLLFRAINVNDSVTKSKFDNLYGCR CCCCCCEECCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHH ESLVDGIKRATDVMIAGKVALVAGYGDVGKGCAQALAALRAQVWVTEIDPINALQAAMEG HHHHHHHHHHHHEEEECCEEEEECCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHCC YKVVTMEYAADKADIFVTTTGNKDVIRHEHMVAMKNEAIVCNIGHFDNEIDVASIEKYRW CEEEEEEECCCCCCEEEEECCCCCHHHHHHEEEECCCEEEEEECCCCCCCCHHHHHHHHH EEVKPQVDHVIFPDGKRITLLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELFTKPDA HHCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCCEEECCCCCCEEEEEEEEECCCC YQAGKVYVLPKVLDEKVARLHLKKVGAQLTELTDAQAAYIGVKKEGPYKADTYRY CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA