Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612706
Identifier: 120612706
GI number: 120612706
Start: 4521704
End: 4522189
Strand: Reverse
Name: 120612706
Synonym: Aave_4069
Alternate gene names: NA
Gene position: 4522189-4521704 (Counterclockwise)
Preceding gene: 120612707
Following gene: 120612705
Centisome position: 84.48
GC content: 73.25
Gene sequence:
>486_bases ATGACGGTGCTTGCCCTGCGGGGCCAGCCACGGGATGATGGCGTGCCGGAAATGCCCATGACGCCACCCCCATCCTCCTC GGACGCCTCTCCCACCTCCGCGGCGGCGCCGTCCGATGTCTCCGCCGCCACCGGGCAGGTGGTGTTCTGGCACCGCGACG CTCCGCCGCAGCCGGCCTTCGGCGCACCCTGCAATGGCTGCGGGCTGTGCTGCCTCGCGGAGCCATGTCCCCTGGGCATG GTGGTTTCACGCCGTCGCACAGGACCTTGCAAGGCCTTGCTGTGGAGTCCTGCCGCGGTTCCGGATGCCTCGGGCCGCTA TGTCTGCGGCATGGTGGCGGATCCGGCCGCGGTTACCGGCTGGCGCCGCGCCTGGGCACTGCGCTGGATAGCCCGGCTGG CCCGGCGCTGGATCGCGGCCGGGCAGGGATGCGATGCCCCGCCGCTGCACGTGGCGCCGGGGGGCTGTCCGGAACGCGGC GCGTGA
Upstream 100 bases:
>100_bases CGGCCGGAGCGATCCGGTCCGCGGCAGAAGGCGCCTTCGGGCGCCTTTTCTTTTTCTGCAGCGGCAAGCCTTTCCCGGGC CGGGTGGTCGGGGCGTGAGC
Downstream 100 bases:
>100_bases CGCGCGGGTGACAGTGCATCAGGGTTTGCGGCGTTGGCACGCCGGACAGGCCGCGGTGCAATAGTCCGATCCATTTCTTC CCGTTTTCTTCAGGAGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTVLALRGQPRDDGVPEMPMTPPPSSSDASPTSAAAPSDVSAATGQVVFWHRDAPPQPAFGAPCNGCGLCCLAEPCPLGM VVSRRRTGPCKALLWSPAAVPDASGRYVCGMVADPAAVTGWRRAWALRWIARLARRWIAAGQGCDAPPLHVAPGGCPERG A
Sequences:
>Translated_161_residues MTVLALRGQPRDDGVPEMPMTPPPSSSDASPTSAAAPSDVSAATGQVVFWHRDAPPQPAFGAPCNGCGLCCLAEPCPLGM VVSRRRTGPCKALLWSPAAVPDASGRYVCGMVADPAAVTGWRRAWALRWIARLARRWIAAGQGCDAPPLHVAPGGCPERG A >Mature_160_residues TVLALRGQPRDDGVPEMPMTPPPSSSDASPTSAAAPSDVSAATGQVVFWHRDAPPQPAFGAPCNGCGLCCLAEPCPLGMV VSRRRTGPCKALLWSPAAVPDASGRYVCGMVADPAAVTGWRRAWALRWIARLARRWIAAGQGCDAPPLHVAPGGCPERGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16694; Mature: 16563
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLALRGQPRDDGVPEMPMTPPPSSSDASPTSAAAPSDVSAATGQVVFWHRDAPPQPAF CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC GAPCNGCGLCCLAEPCPLGMVVSRRRTGPCKALLWSPAAVPDASGRYVCGMVADPAAVTG CCCCCCCCEEEECCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHH WRRAWALRWIARLARRWIAAGQGCDAPPLHVAPGGCPERGA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure TVLALRGQPRDDGVPEMPMTPPPSSSDASPTSAAAPSDVSAATGQVVFWHRDAPPQPAF EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC GAPCNGCGLCCLAEPCPLGMVVSRRRTGPCKALLWSPAAVPDASGRYVCGMVADPAAVTG CCCCCCCCEEEECCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHH WRRAWALRWIARLARRWIAAGQGCDAPPLHVAPGGCPERGA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA