Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is erpA [H]
Identifier: 120612686
GI number: 120612686
Start: 4501018
End: 4501383
Strand: Reverse
Name: erpA [H]
Synonym: Aave_4049
Alternate gene names: 120612686
Gene position: 4501383-4501018 (Counterclockwise)
Preceding gene: 120612687
Following gene: 120612685
Centisome position: 84.09
GC content: 61.75
Gene sequence:
>366_bases ATGAGCGCAGTAGCCGAGAACATCCAGACCGAAATGCCCGCCCCCATCGTCTTCACCGACAGTGCAGCCGCCAAGGTGGC CGACCTGATCGCCGAAGAGGGCAATCCCGACCTGAAGCTCCGCGTATTCGTGCAAGGCGGCGGCTGCTCGGGCTTCCAGT ACGGCTTCACGTTCGACGAGATCACGAACGAGGACGACACCACCATGACGAAGAACGGCGTTTCGCTGCTGATCGACGCC ATGAGCTACCAGTACCTGGTGGGCGCCGAGATCGACTACAAGGAAGACCTGCAGGGCGCCCAGTTCGTCATCAAGAACCC GAACGCCACCACCACCTGCGGCTGCGGATCGAGCTTCTCGGTCTGA
Upstream 100 bases:
>100_bases AAGCCCACACTCAAATTGGCGTCAAAGGCAGGCTGAACGGCGTGAAAACGCCATTGCAGTACCATCGAGCCCAATTCCTC CCCTCAGCCGGAGACACCCC
Downstream 100 bases:
>100_bases CCGCCTCCGTGTGAGAGCAAGCCGCCCGAGGGCGGCTTTTTTGTTCCTGCAGAAGCCGTCTCTCCCCCATGTCCTCCAGC TCCGCAGCCGAGATATCCCC
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSAVAENIQTEMPAPIVFTDSAAAKVADLIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDA MSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFSV
Sequences:
>Translated_121_residues MSAVAENIQTEMPAPIVFTDSAAAKVADLIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDA MSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFSV >Mature_120_residues SAVAENIQTEMPAPIVFTDSAAAKVADLIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDAM SYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFSV
Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=39.2523364485981, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI52426768, Length=121, Percent_Identity=30.5785123966942, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=61.2612612612613, Blast_Score=153, Evalue=3e-39, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=35.8490566037736, Blast_Score=70, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=37.962962962963, Blast_Score=79, Evalue=5e-16, Organism=Caenorhabditis elegans, GI193209025, Length=113, Percent_Identity=30.9734513274336, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25146411, Length=111, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=109, Percent_Identity=34.8623853211009, Blast_Score=71, Evalue=4e-14, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=48.1927710843374, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24642263, Length=109, Percent_Identity=33.0275229357798, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12908; Mature: 12776
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVAENIQTEMPAPIVFTDSAAAKVADLIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDE CCCHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHH ITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFS HCCCCCCEEECCCCEEEEECCCCEEEECCCCCCHHCCCCCEEEEECCCCCEEECCCCCCC V C >Mature Secondary Structure SAVAENIQTEMPAPIVFTDSAAAKVADLIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDE CCHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHH ITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFS HCCCCCCEEECCCCEEEEECCCCEEEECCCCCCHHCCCCCEEEEECCCCCEEECCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA