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The map label for this gene is yagT [H]

Identifier: 120612651

GI number: 120612651

Start: 4462721

End: 4463392

Strand: Reverse

Name: yagT [H]

Synonym: Aave_4014

Alternate gene names: 120612651

Gene position: 4463392-4462721 (Counterclockwise)

Preceding gene: 120612656

Following gene: 120612650

Centisome position: 83.38

GC content: 71.88

Gene sequence:

>672_bases
ATGTCATCCAGCCACCCCACGTCGGTCGCCCGCGCCAGCGGTCCGGCCGAATCCGCCGTGTCGATCCATGCGGTGCGCCT
GCACGTGAACGGAACGCCACAGCACCTCGATATTCCCTGCTGGGTCACGCTGCTCGACACACTGCGCGACCTGCTGCAGC
TCACCGGCACCAAGAAAGGCTGCGACCACGGTCAGTGCGGCGCCTGCACGGTGCTGGTGGACGGGCAGCGCATCAACAGC
TGCCTCACGCTCGCCGTGATGCACGACGGCGCGCACATCACCACCGTCGAGGGCCTCGCGGACCTGCGGGGCGGGGCGGG
TACGGGGAGCGATGCCGGTGCGGCGTCCGGGGATGCCCGGCACGAGGCGGATGCGCTGCACCCGTTGCAGCAGGCCTTCA
TCGACCACGATGCATTCCAGTGCGGCTACTGCACGCCGGGGCAATTGTGTTCCGCCGCGGGCCTGCTCAACGAAGGCGGC
GTGCGCACGGCCGACGACATCCGCGAGCGCATGAGCGGCAACCTGTGCCGCTGCGGCGCGTATCCGCAGATCGTGCAGGC
CGTCGCCGAAGTGGCGGGGGTGCCGCTGCGCGGCCCCGCGCGGCCCTCTGCGCACGAAGCGCAGGCCACGCCACGGCCCC
GGCCGGCACCAGCCGGGGAGGGCGCGGCATGA

Upstream 100 bases:

>100_bases
GACGCCGCTCCAGGCCGACCATGGGCGCGCGATCTTCCTACAGGTCCCGCCGCACCTGCCGACGACACTGTTTTCGTCCA
CCGGCCGTGAAGGAAGCGAG

Downstream 100 bases:

>100_bases
GGGGCTTCGACTACGTGCCGGCGGTGGACGCCGAGATGGCGCTCGCCACCATGCCGCAGGGCACGCACCACGCGAGCGAG
CGGGCGCTGCCCGCGAAGTT

Product: 2Fe-2S iron-sulfur cluster-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSSSHPTSVARASGPAESAVSIHAVRLHVNGTPQHLDIPCWVTLLDTLRDLLQLTGTKKGCDHGQCGACTVLVDGQRINS
CLTLAVMHDGAHITTVEGLADLRGGAGTGSDAGAASGDARHEADALHPLQQAFIDHDAFQCGYCTPGQLCSAAGLLNEGG
VRTADDIRERMSGNLCRCGAYPQIVQAVAEVAGVPLRGPARPSAHEAQATPRPRPAPAGEGAA

Sequences:

>Translated_223_residues
MSSSHPTSVARASGPAESAVSIHAVRLHVNGTPQHLDIPCWVTLLDTLRDLLQLTGTKKGCDHGQCGACTVLVDGQRINS
CLTLAVMHDGAHITTVEGLADLRGGAGTGSDAGAASGDARHEADALHPLQQAFIDHDAFQCGYCTPGQLCSAAGLLNEGG
VRTADDIRERMSGNLCRCGAYPQIVQAVAEVAGVPLRGPARPSAHEAQATPRPRPAPAGEGAA
>Mature_222_residues
SSSHPTSVARASGPAESAVSIHAVRLHVNGTPQHLDIPCWVTLLDTLRDLLQLTGTKKGCDHGQCGACTVLVDGQRINSC
LTLAVMHDGAHITTVEGLADLRGGAGTGSDAGAASGDARHEADALHPLQQAFIDHDAFQCGYCTPGQLCSAAGLLNEGGV
RTADDIRERMSGNLCRCGAYPQIVQAVAEVAGVPLRGPARPSAHEAQATPRPRPAPAGEGAA

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786480, Length=205, Percent_Identity=50.7317073170732, Blast_Score=190, Evalue=7e-50,
Organism=Escherichia coli, GI1789232, Length=166, Percent_Identity=37.3493975903614, Blast_Score=92, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17540638, Length=175, Percent_Identity=36, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17539860, Length=157, Percent_Identity=31.2101910828025, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32566215, Length=157, Percent_Identity=31.8471337579618, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24647193, Length=181, Percent_Identity=31.4917127071823, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24647199, Length=176, Percent_Identity=33.5227272727273, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24647201, Length=172, Percent_Identity=31.9767441860465, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24647197, Length=183, Percent_Identity=32.7868852459016, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24647195, Length=183, Percent_Identity=32.7868852459016, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17737937, Length=154, Percent_Identity=35.0649350649351, Blast_Score=83, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 22891; Mature: 22760

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSHPTSVARASGPAESAVSIHAVRLHVNGTPQHLDIPCWVTLLDTLRDLLQLTGTKKG
CCCCCCCHHHHCCCCCHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
CDHGQCGACTVLVDGQRINSCLTLAVMHDGAHITTVEGLADLRGGAGTGSDAGAASGDAR
CCCCCCCEEEEEECCHHHCHHEEEEEEECCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCH
HEADALHPLQQAFIDHDAFQCGYCTPGQLCSAAGLLNEGGVRTADDIRERMSGNLCRCGA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCC
YPQIVQAVAEVAGVPLRGPARPSAHEAQATPRPRPAPAGEGAA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSSHPTSVARASGPAESAVSIHAVRLHVNGTPQHLDIPCWVTLLDTLRDLLQLTGTKKG
CCCCCCHHHHCCCCCHHCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
CDHGQCGACTVLVDGQRINSCLTLAVMHDGAHITTVEGLADLRGGAGTGSDAGAASGDAR
CCCCCCCEEEEEECCHHHCHHEEEEEEECCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCH
HEADALHPLQQAFIDHDAFQCGYCTPGQLCSAAGLLNEGGVRTADDIRERMSGNLCRCGA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCC
YPQIVQAVAEVAGVPLRGPARPSAHEAQATPRPRPAPAGEGAA
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]