Click here to switch to the map view.

The map label for this gene is yagS [H]

Identifier: 120612650

GI number: 120612650

Start: 4461642

End: 4462724

Strand: Reverse

Name: yagS [H]

Synonym: Aave_4013

Alternate gene names: 120612650

Gene position: 4462724-4461642 (Counterclockwise)

Preceding gene: 120612651

Following gene: 120612649

Centisome position: 83.37

GC content: 73.5

Gene sequence:

>1083_bases
ATGAGGGGCTTCGACTACGTGCCGGCGGTGGACGCCGAGATGGCGCTCGCCACCATGCCGCAGGGCACGCACCACGCGAG
CGAGCGGGCGCTGCCCGCGAAGTTCATCGCCGGCGGCACCAACCTCATCGACCTGATGAAGGAAAGCGTGATGCGGCCGC
GCCGCCTCGTGGACGTGGGGCGCCTGCCGTTCGCCGACATCGAGGAGACCGGGGGCGGCGGCGTGCGCCTGGGGGCGCTG
GCCCGCAATGCCGCCACCGCGAAGCATCCGCTGGTGCGCGAGCGCTATCCGCTGCTCGCGGCCGCCATCCTCGCCGGGGC
CTCGCCGCAGATCCGCAACATGGCCACCAACGGCGGCAACCTGCTGCAGCGCACGCGCTGCCACTACTTCTACGACGTGG
CCGTGCCGTGCAACAAGCGCGAGCCGGGCACGGGCTGCCCCGCGCGCGACGGGCTGGCACGCCAATTGGCGATCCTGGGC
ACGAGCGACCAGTGCATCGCCACGCACCCGTCCGACATGTGCGTGGCCCTCGCGGCACTGGAGGCCGTGGTGCACGTGCG
CTCCCCCCGTGGCGAGCACACGATCCCGTTCTCGGATTTCCACCGGCTGCCGGGCAGCGAGCCCGACCGTGACACGGTGC
TGGCGAGCGACGAACTCATCACCCATATCGTCCTGCCGGCGCAGGGATTCGCGCGGCACGGCGCCTACCTGAAGGTGCGC
GACCGCGCCTCGTATGCGTTCGCGCTGGTGTCGGTCGCGGCGGGGCTGGACCTGGGCGAGGACGGCCGCGTCCGCGCGGC
GCGCATCGCCGTGGGCGGCGTGGCCCACAAGCCCTGGCGCGTGCCGGAGGCCGAGGACGCCCTGGCGGGCCGCGAGCCCA
CGGCCGAGGCCTTCGCGCAGGCGTCCGAGCGGCTGCTGCGGGGCGCACGCGGCCACGGCACGCCCGGTGGCCCGGGCGAC
AACCGCTTCAAGATCGAACTGGCCCGGCGGGCCATCGTGCGCGCGCTGGAGATGGCGCGTGACGGCGAACTCACCAACAC
CGGCGAACTGGGCGCCGGACACGTACAGGACGCGCAGCCATGA

Upstream 100 bases:

>100_bases
AAGTGGCGGGGGTGCCGCTGCGCGGCCCCGCGCGGCCCTCTGCGCACGAAGCGCAGGCCACGCCACGGCCCCGGCCGGCA
CCAGCCGGGGAGGGCGCGGC

Downstream 100 bases:

>100_bases
ACGCACCGATGCCGAACGAAGCGGCGGACCGCGCACAGGCGGGACAGCAGCCCCGCGCCGATGCCGGCACCGGGCCGGTG
AAACTGGGCATGCCGGTCTC

Product: molybdopterin dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRGFDYVPAVDAEMALATMPQGTHHASERALPAKFIAGGTNLIDLMKESVMRPRRLVDVGRLPFADIEETGGGGVRLGAL
ARNAATAKHPLVRERYPLLAAAILAGASPQIRNMATNGGNLLQRTRCHYFYDVAVPCNKREPGTGCPARDGLARQLAILG
TSDQCIATHPSDMCVALAALEAVVHVRSPRGEHTIPFSDFHRLPGSEPDRDTVLASDELITHIVLPAQGFARHGAYLKVR
DRASYAFALVSVAAGLDLGEDGRVRAARIAVGGVAHKPWRVPEAEDALAGREPTAEAFAQASERLLRGARGHGTPGGPGD
NRFKIELARRAIVRALEMARDGELTNTGELGAGHVQDAQP

Sequences:

>Translated_360_residues
MRGFDYVPAVDAEMALATMPQGTHHASERALPAKFIAGGTNLIDLMKESVMRPRRLVDVGRLPFADIEETGGGGVRLGAL
ARNAATAKHPLVRERYPLLAAAILAGASPQIRNMATNGGNLLQRTRCHYFYDVAVPCNKREPGTGCPARDGLARQLAILG
TSDQCIATHPSDMCVALAALEAVVHVRSPRGEHTIPFSDFHRLPGSEPDRDTVLASDELITHIVLPAQGFARHGAYLKVR
DRASYAFALVSVAAGLDLGEDGRVRAARIAVGGVAHKPWRVPEAEDALAGREPTAEAFAQASERLLRGARGHGTPGGPGD
NRFKIELARRAIVRALEMARDGELTNTGELGAGHVQDAQP
>Mature_360_residues
MRGFDYVPAVDAEMALATMPQGTHHASERALPAKFIAGGTNLIDLMKESVMRPRRLVDVGRLPFADIEETGGGGVRLGAL
ARNAATAKHPLVRERYPLLAAAILAGASPQIRNMATNGGNLLQRTRCHYFYDVAVPCNKREPGTGCPARDGLARQLAILG
TSDQCIATHPSDMCVALAALEAVVHVRSPRGEHTIPFSDFHRLPGSEPDRDTVLASDELITHIVLPAQGFARHGAYLKVR
DRASYAFALVSVAAGLDLGEDGRVRAARIAVGGVAHKPWRVPEAEDALAGREPTAEAFAQASERLLRGARGHGTPGGPGD
NRFKIELARRAIVRALEMARDGELTNTGELGAGHVQDAQP

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=316, Percent_Identity=50.3164556962025, Blast_Score=265, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 38389; Mature: 38389

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFDYVPAVDAEMALATMPQGTHHASERALPAKFIAGGTNLIDLMKESVMRPRRLVDVG
CCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHC
RLPFADIEETGGGGVRLGALARNAATAKHPLVRERYPLLAAAILAGASPQIRNMATNGGN
CCCCCCHHCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCH
LLQRTRCHYFYDVAVPCNKREPGTGCPARDGLARQLAILGTSDQCIATHPSDMCVALAAL
HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHEEEEECCCCCEEEECCHHHHHHHHHH
EAVVHVRSPRGEHTIPFSDFHRLPGSEPDRDTVLASDELITHIVLPAQGFARHGAYLKVR
HHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEECHHHHEEEEECCCHHHHCCCEEEEE
DRASYAFALVSVAAGLDLGEDGRVRAARIAVGGVAHKPWRVPEAEDALAGREPTAEAFAQ
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHH
ASERLLRGARGHGTPGGPGDNRFKIELARRAIVRALEMARDGELTNTGELGAGHVQDAQP
HHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGFDYVPAVDAEMALATMPQGTHHASERALPAKFIAGGTNLIDLMKESVMRPRRLVDVG
CCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHC
RLPFADIEETGGGGVRLGALARNAATAKHPLVRERYPLLAAAILAGASPQIRNMATNGGN
CCCCCCHHCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCH
LLQRTRCHYFYDVAVPCNKREPGTGCPARDGLARQLAILGTSDQCIATHPSDMCVALAAL
HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCHHHEEEEECCCCCEEEECCHHHHHHHHHH
EAVVHVRSPRGEHTIPFSDFHRLPGSEPDRDTVLASDELITHIVLPAQGFARHGAYLKVR
HHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEECHHHHEEEEECCCHHHHCCCEEEEE
DRASYAFALVSVAAGLDLGEDGRVRAARIAVGGVAHKPWRVPEAEDALAGREPTAEAFAQ
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHH
ASERLLRGARGHGTPGGPGDNRFKIELARRAIVRALEMARDGELTNTGELGAGHVQDAQP
HHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]