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The map label for this gene is yagR [H]

Identifier: 120612649

GI number: 120612649

Start: 4459258

End: 4461645

Strand: Reverse

Name: yagR [H]

Synonym: Aave_4012

Alternate gene names: 120612649

Gene position: 4461645-4459258 (Counterclockwise)

Preceding gene: 120612650

Following gene: 120612648

Centisome position: 83.35

GC content: 71.23

Gene sequence:

>2388_bases
ATGAACGCACCGATGCCGAACGAAGCGGCGGACCGCGCACAGGCGGGACAGCAGCCCCGCGCCGATGCCGGCACCGGGCC
GGTGAAACTGGGCATGCCGGTCTCGCGCGTGGACGGCCGCCTGAAGGTGACGGGCCAGGCCCGCTATGCGGCCGAGCACC
ATGCGGAGGGCATGGCCTTCGGCGTGGTGGTCAACAGCAGCATCGCCAAAGGCCGCATCCTGCGCATGCACCTCGACCGT
GCCCGCGCGGTGCCGGGCGTGCTGGACGTCATCACGCACGAGAACCGCCCGAAGGTCCGCTCGATGGACCTGTTCTACAA
GGACATGACGGCGCCCGGCGGCTCGCCGTTCAAGCCGCTGCTGGACGACGTGGTGCGCTACAGCGGCCAACCCGTCGCGC
TGGTGGTGGCCTGCACGTTCGAGGCGGCGCGCTGCGCGGCCTCGCTGGTGGAGATCGACTACGAGGTGGAACGCCACGAG
ACGCACCTGCTGCGCCACCTGGGCCGCGCGCGCGACCCCAGCCGCATGAAGGCCGGCTATTCGCCGCCGCCGAAGCCGCG
CGGCGATGCCGACGGCGCCTTCGAGCGCGCGCCCGTGAAGATCGAGGCCGAGTACTACAGCGGCGTGGAGCACCACAACC
CGATGGAGATGCATGCCTCCACCGTGCTGCGCGCCGAGGATGGCCACCTCACCATCTACGACAAGACGCAGAGCCCGCAG
AACAGCCGCTGGCTGGTCTCGCGCGTATTCGGCCTGGGCGAGGACGAGGTCACGGTGCGCAACCCGTTCGTCGGCGGCGC
CTTCGGATCCGGACTGCGTCCGCAGTACCAGCTCGTGCTCGCCGTGATGGCGGCGCTGCATCTGCAGTGCTCGGTGCGCG
TGGTGCTCACGCGCCAGCAGATGTTCACCTTCGGCCACCGGCCCGAGACCTGGCAGCGCCTGAAGCTCGCGGCCGACCGG
GACGGCACGCTGCGCGCCATCGTGCACGAGGCCGTCGCGGAGACGTCGCGCATGGAAGACTACGTGGAGGTGGTGGTGAA
CTGGTCCGGCCAGCTCTACCGCTGCGACAACGTGCGGCTCGGCTATCGGCTGGTGCCGCTCGACCAGTACACGCCGCTGG
ACATGCGCGCGCCCGGCGCCGCGCACGGCGTGCATGCGCTCGAAGTGGCCATGGACGAGCTCGCTTACGAACTGCGCATG
GACCCGCTCGCGCTGCGCCTGAAGAACTACGCCGACCGCGACGCTTCGAAGGACCTCCCGTTCTCCACCAAGGAGCTGCG
TGCGTGCTACGGCCTGGGCGCGGCCCGCTTCGGCTGGGACGGCCGGCCGGTCGAGCCGCGCTCGATGCGCGAAGGCCGCG
AACTCGTGGGCTGGGGCATGGCCACCGGCACCTGGGATGCGATGCAGATGTTCGCCAGGGTGCGTGCGGTGCTGCATGCC
GACGGCCGCCTGGAGGTGAGCAGTGCGGCGTCGGACATCGGCACCGGCACGTACACGGTGATGTCGATGATCGCGGCCGA
GGCGATGGGCCTGCCGCTCGAGCGCGTGACCTTCCGCCTGGGCGACTCCACGCTGCCGGTGGCGCCGATCGAAGGCGGCT
CGTCCCACGTGGCCACCGTCGGCTCGGCGGTGGAGGGCGCCTGCGAGAAGCTGCGCCGCCTGCTGTGGGCGCTGGCGCAG
CGCACGCGCGGCTCGGGCTTCGAGCGCACGCTGCTGCGCGACGTGGAGTTCGTGGACGGCTGCCTGCGCCGCCGCGGCGC
GCCCGCGCATGATCGCGGCATGGCGCTCACCGACATCCTCGCCGCCCAGGGGCGCTCGCAGGTCGAGGCCCGCTACCTGC
TGCTGCCCAACGTGCTCCGGCAGAAGAACTACGTGCGCGCCACGCATTCGGCGGTGTTCTGCGAGGTGAAGGTGGACGAG
GAACTCGGCACCGTGCGCGTGACCCGCGTGGTGAGCGCGATCGCTGCGGGCCGCATCCTGAGCGCCAAGACGGCGCACAG
CCAGATCACCGGCGGGGTGGTGTGGGGCATCAGCCAGGCGCTGCACGAAGAGACGCAGACCGACCACGCGCTGGGACGGT
TCATGAACCACAACTACGCCGAATACCACGTGGCCTCGAACGCCGACACGCCGCCCATCGACGCGATCTTCGTGCAGGAG
GACGACCGCATCGTGAGCCGCCTGGGCGCCAAGGGCGTGGGCGAGATCGGCATCGTGGGCGTGGCCGCGGCCGTGTGCAA
CGCGATCTTCCACGCCACGGGCCGGCGCGTGCGCTCCACGCCGATGACGCCCGACAAGGTGATGCGGCCCGCGCCCGACG
CGCCGCCCAAGCCCATGGAACACGTGCCCGCCGGCGTGGCGGCGCAGGCGATGGACGCACCGCAGTGA

Upstream 100 bases:

>100_bases
TGGCCCGGCGGGCCATCGTGCGCGCGCTGGAGATGGCGCGTGACGGCGAACTCACCAACACCGGCGAACTGGGCGCCGGA
CACGTACAGGACGCGCAGCC

Downstream 100 bases:

>100_bases
CGCACGACTCCGCACCTGAACTGCGCGTGGCCCGCGCACTGCACGGCTGGCGCACCGCCGGCCGCCACGCGGTGCTCGCC
ACCGTGCTGCGCACCTGGGG

Product: xanthine dehydrogenase, molybdenum-binding subunit apoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MNAPMPNEAADRAQAGQQPRADAGTGPVKLGMPVSRVDGRLKVTGQARYAAEHHAEGMAFGVVVNSSIAKGRILRMHLDR
ARAVPGVLDVITHENRPKVRSMDLFYKDMTAPGGSPFKPLLDDVVRYSGQPVALVVACTFEAARCAASLVEIDYEVERHE
THLLRHLGRARDPSRMKAGYSPPPKPRGDADGAFERAPVKIEAEYYSGVEHHNPMEMHASTVLRAEDGHLTIYDKTQSPQ
NSRWLVSRVFGLGEDEVTVRNPFVGGAFGSGLRPQYQLVLAVMAALHLQCSVRVVLTRQQMFTFGHRPETWQRLKLAADR
DGTLRAIVHEAVAETSRMEDYVEVVVNWSGQLYRCDNVRLGYRLVPLDQYTPLDMRAPGAAHGVHALEVAMDELAYELRM
DPLALRLKNYADRDASKDLPFSTKELRACYGLGAARFGWDGRPVEPRSMREGRELVGWGMATGTWDAMQMFARVRAVLHA
DGRLEVSSAASDIGTGTYTVMSMIAAEAMGLPLERVTFRLGDSTLPVAPIEGGSSHVATVGSAVEGACEKLRRLLWALAQ
RTRGSGFERTLLRDVEFVDGCLRRRGAPAHDRGMALTDILAAQGRSQVEARYLLLPNVLRQKNYVRATHSAVFCEVKVDE
ELGTVRVTRVVSAIAAGRILSAKTAHSQITGGVVWGISQALHEETQTDHALGRFMNHNYAEYHVASNADTPPIDAIFVQE
DDRIVSRLGAKGVGEIGIVGVAAAVCNAIFHATGRRVRSTPMTPDKVMRPAPDAPPKPMEHVPAGVAAQAMDAPQ

Sequences:

>Translated_795_residues
MNAPMPNEAADRAQAGQQPRADAGTGPVKLGMPVSRVDGRLKVTGQARYAAEHHAEGMAFGVVVNSSIAKGRILRMHLDR
ARAVPGVLDVITHENRPKVRSMDLFYKDMTAPGGSPFKPLLDDVVRYSGQPVALVVACTFEAARCAASLVEIDYEVERHE
THLLRHLGRARDPSRMKAGYSPPPKPRGDADGAFERAPVKIEAEYYSGVEHHNPMEMHASTVLRAEDGHLTIYDKTQSPQ
NSRWLVSRVFGLGEDEVTVRNPFVGGAFGSGLRPQYQLVLAVMAALHLQCSVRVVLTRQQMFTFGHRPETWQRLKLAADR
DGTLRAIVHEAVAETSRMEDYVEVVVNWSGQLYRCDNVRLGYRLVPLDQYTPLDMRAPGAAHGVHALEVAMDELAYELRM
DPLALRLKNYADRDASKDLPFSTKELRACYGLGAARFGWDGRPVEPRSMREGRELVGWGMATGTWDAMQMFARVRAVLHA
DGRLEVSSAASDIGTGTYTVMSMIAAEAMGLPLERVTFRLGDSTLPVAPIEGGSSHVATVGSAVEGACEKLRRLLWALAQ
RTRGSGFERTLLRDVEFVDGCLRRRGAPAHDRGMALTDILAAQGRSQVEARYLLLPNVLRQKNYVRATHSAVFCEVKVDE
ELGTVRVTRVVSAIAAGRILSAKTAHSQITGGVVWGISQALHEETQTDHALGRFMNHNYAEYHVASNADTPPIDAIFVQE
DDRIVSRLGAKGVGEIGIVGVAAAVCNAIFHATGRRVRSTPMTPDKVMRPAPDAPPKPMEHVPAGVAAQAMDAPQ
>Mature_795_residues
MNAPMPNEAADRAQAGQQPRADAGTGPVKLGMPVSRVDGRLKVTGQARYAAEHHAEGMAFGVVVNSSIAKGRILRMHLDR
ARAVPGVLDVITHENRPKVRSMDLFYKDMTAPGGSPFKPLLDDVVRYSGQPVALVVACTFEAARCAASLVEIDYEVERHE
THLLRHLGRARDPSRMKAGYSPPPKPRGDADGAFERAPVKIEAEYYSGVEHHNPMEMHASTVLRAEDGHLTIYDKTQSPQ
NSRWLVSRVFGLGEDEVTVRNPFVGGAFGSGLRPQYQLVLAVMAALHLQCSVRVVLTRQQMFTFGHRPETWQRLKLAADR
DGTLRAIVHEAVAETSRMEDYVEVVVNWSGQLYRCDNVRLGYRLVPLDQYTPLDMRAPGAAHGVHALEVAMDELAYELRM
DPLALRLKNYADRDASKDLPFSTKELRACYGLGAARFGWDGRPVEPRSMREGRELVGWGMATGTWDAMQMFARVRAVLHA
DGRLEVSSAASDIGTGTYTVMSMIAAEAMGLPLERVTFRLGDSTLPVAPIEGGSSHVATVGSAVEGACEKLRRLLWALAQ
RTRGSGFERTLLRDVEFVDGCLRRRGAPAHDRGMALTDILAAQGRSQVEARYLLLPNVLRQKNYVRATHSAVFCEVKVDE
ELGTVRVTRVVSAIAAGRILSAKTAHSQITGGVVWGISQALHEETQTDHALGRFMNHNYAEYHVASNADTPPIDAIFVQE
DDRIVSRLGAKGVGEIGIVGVAAAVCNAIFHATGRRVRSTPMTPDKVMRPAPDAPPKPMEHVPAGVAAQAMDAPQ

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=795, Percent_Identity=23.0188679245283, Blast_Score=103, Evalue=8e-22,
Organism=Homo sapiens, GI91823271, Length=561, Percent_Identity=22.6381461675579, Blast_Score=93, Evalue=1e-18,
Organism=Escherichia coli, GI1786478, Length=762, Percent_Identity=37.2703412073491, Blast_Score=382, Evalue=1e-107,
Organism=Escherichia coli, GI1789230, Length=765, Percent_Identity=27.0588235294118, Blast_Score=200, Evalue=3e-52,
Organism=Escherichia coli, GI1789246, Length=775, Percent_Identity=26.5806451612903, Blast_Score=149, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24647199, Length=704, Percent_Identity=20.7386363636364, Blast_Score=106, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24647193, Length=595, Percent_Identity=23.5294117647059, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24647195, Length=755, Percent_Identity=21.4569536423841, Blast_Score=89, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 86902; Mature: 86902

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPMPNEAADRAQAGQQPRADAGTGPVKLGMPVSRVDGRLKVTGQARYAAEHHAEGMAF
CCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCHHHCCCEEEEECCHHHHHHHCCCCEEE
GVVVNSSIAKGRILRMHLDRARAVPGVLDVITHENRPKVRSMDLFYKDMTAPGGSPFKPL
EEEEECCCCCCEEEEEEHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHH
LDDVVRYSGQPVALVVACTFEAARCAASLVEIDYEVERHETHLLRHLGRARDPSRMKAGY
HHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHCCCC
SPPPKPRGDADGAFERAPVKIEAEYYSGVEHHNPMEMHASTVLRAEDGHLTIYDKTQSPQ
CCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHEEEECCCEEEEEECCCCCC
NSRWLVSRVFGLGEDEVTVRNPFVGGAFGSGLRPQYQLVLAVMAALHLQCSVRVVLTRQQ
CCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEHHH
MFTFGHRPETWQRLKLAADRDGTLRAIVHEAVAETSRMEDYVEVVVNWSGQLYRCDNVRL
HHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEE
GYRLVPLDQYTPLDMRAPGAAHGVHALEVAMDELAYELRMDPLALRLKNYADRDASKDLP
CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
FSTKELRACYGLGAARFGWDGRPVEPRSMREGRELVGWGMATGTWDAMQMFARVRAVLHA
CCHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHC
DGRLEVSSAASDIGTGTYTVMSMIAAEAMGLPLERVTFRLGDSTLPVAPIEGGSSHVATV
CCCEEEHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCEEECCCCCCHHHHH
GSAVEGACEKLRRLLWALAQRTRGSGFERTLLRDVEFVDGCLRRRGAPAHDRGMALTDIL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AAQGRSQVEARYLLLPNVLRQKNYVRATHSAVFCEVKVDEELGTVRVTRVVSAIAAGRIL
HHCCCHHHHHHHHHHHHHHHHCCHHEEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCHH
SAKTAHSQITGGVVWGISQALHEETQTDHALGRFMNHNYAEYHVASNADTPPIDAIFVQE
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEC
DDRIVSRLGAKGVGEIGIVGVAAAVCNAIFHATGRRVRSTPMTPDKVMRPAPDAPPKPME
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHH
HVPAGVAAQAMDAPQ
HCCCCHHHHHCCCCC
>Mature Secondary Structure
MNAPMPNEAADRAQAGQQPRADAGTGPVKLGMPVSRVDGRLKVTGQARYAAEHHAEGMAF
CCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCHHHCCCEEEEECCHHHHHHHCCCCEEE
GVVVNSSIAKGRILRMHLDRARAVPGVLDVITHENRPKVRSMDLFYKDMTAPGGSPFKPL
EEEEECCCCCCEEEEEEHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHH
LDDVVRYSGQPVALVVACTFEAARCAASLVEIDYEVERHETHLLRHLGRARDPSRMKAGY
HHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHCCCC
SPPPKPRGDADGAFERAPVKIEAEYYSGVEHHNPMEMHASTVLRAEDGHLTIYDKTQSPQ
CCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHEEEECCCEEEEEECCCCCC
NSRWLVSRVFGLGEDEVTVRNPFVGGAFGSGLRPQYQLVLAVMAALHLQCSVRVVLTRQQ
CCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEEEHHH
MFTFGHRPETWQRLKLAADRDGTLRAIVHEAVAETSRMEDYVEVVVNWSGQLYRCDNVRL
HHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEE
GYRLVPLDQYTPLDMRAPGAAHGVHALEVAMDELAYELRMDPLALRLKNYADRDASKDLP
CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
FSTKELRACYGLGAARFGWDGRPVEPRSMREGRELVGWGMATGTWDAMQMFARVRAVLHA
CCHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHC
DGRLEVSSAASDIGTGTYTVMSMIAAEAMGLPLERVTFRLGDSTLPVAPIEGGSSHVATV
CCCEEEHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCEEECCCCCCHHHHH
GSAVEGACEKLRRLLWALAQRTRGSGFERTLLRDVEFVDGCLRRRGAPAHDRGMALTDIL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AAQGRSQVEARYLLLPNVLRQKNYVRATHSAVFCEVKVDEELGTVRVTRVVSAIAAGRIL
HHCCCHHHHHHHHHHHHHHHHCCHHEEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCHH
SAKTAHSQITGGVVWGISQALHEETQTDHALGRFMNHNYAEYHVASNADTPPIDAIFVQE
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEC
DDRIVSRLGAKGVGEIGIVGVAAAVCNAIFHATGRRVRSTPMTPDKVMRPAPDAPPKPME
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHH
HVPAGVAAQAMDAPQ
HCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]