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The map label for this gene is 120612627

Identifier: 120612627

GI number: 120612627

Start: 4422757

End: 4423572

Strand: Direct

Name: 120612627

Synonym: Aave_3989

Alternate gene names: NA

Gene position: 4422757-4423572 (Clockwise)

Preceding gene: 120612626

Following gene: 120612629

Centisome position: 82.63

GC content: 76.47

Gene sequence:

>816_bases
ATGCGTCAATGCGCCCGCCACGCTGTTCGACAGCGCCGCGCGGCTTTCGCTCAGGGATCGCCGGAGGGTGCCCGCGGCCG
GCCCCGCTGGCGTACAGGCCTGCGCCGGTGCCTGGCCCGGCGCAGGCTCCGCGGCCAGGGCATCGCGCTGGCGGGCCATC
CTCTGCCAGTAGGCCAGCAGCATGCCGAGACCGGCGAGCAGCTGCAGGCCCGCCAGCTGGTGGTCCGGCAGATGCCGGAG
CGTGCCGTACACCGCCTCGCCGATCAGGTCCTCGGCCAGTTGCGGGCCATCGAGCTGCACCAGTGCCTGCGCGATGCGCC
AGGCCGTCTCCTGGTCGCCTCGCTCCGCCAGCTGCCGTGGCAGCGCGGTCACGCCGGCAGAGAACCACTGCGCGGCGGTG
GCCAGCTGCGCGGCCATGGCCCCGACGAGTTCCGGTTGCCGCAGGGTGTCCAGGACGACGGCGGTCCACGCGGGATGGGC
ACGCATCTCCTCGGTCAGCCGCGCCGCCTGGCGGACCAGGCTGCGCCACAGGGGCTGCAGGGCGGGGCACAGGCCCCCGG
AACCCTGCAGGCCGCCAGGCGCCGCTGCCGTCTCCTGCGAAGAGGCCGCACGGGGCGCAGCACGGGAGGAGGACGTACCC
GCGGCGCGTGGCGGGCGGTCGGCGTTTCCGGGCAGTCCCGCGTGCCCGGGCAGGGAATGGGCGCGCGGCAGCAGCGGGGC
CGCATGGGCGAGCTGCCGCGGCCCGGCCTCCTGCGCCCGCGCAGCGGCAGGCTCGGGGTGGGAAGGCGCGGCCTGGCGGC
GGGACGATCGCAGTGA

Upstream 100 bases:

>100_bases
GGCTGCGGCCGAACCAGTGGCTGGCCGCCCGGCGGGCCTCGTCCGCCATCCACTGGGCCACGCCCGCGGCATATTCGCCG
TCCATCACGCCCTGGGCGGC

Downstream 100 bases:

>100_bases
TGTGGCAGGTGGCGTGGAAGGCATCGGAGCAGGCGCCGGCCAGCGGACAGGCAGCGCAATGCGGTGGTCGAAGGCGGGCA
CGGAGCGCGACGCCCGGCCC

Product: LigA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRQCARHAVRQRRAAFAQGSPEGARGRPRWRTGLRRCLARRRLRGQGIALAGHPLPVGQQHAETGEQLQARQLVVRQMPE
RAVHRLADQVLGQLRAIELHQCLRDAPGRLLVASLRQLPWQRGHAGREPLRGGGQLRGHGPDEFRLPQGVQDDGGPRGMG
THLLGQPRRLADQAAPQGLQGGAQAPGTLQAARRRCRLLRRGRTGRSTGGGRTRGAWRAVGVSGQSRVPGQGMGARQQRG
RMGELPRPGLLRPRSGRLGVGRRGLAAGRSQ

Sequences:

>Translated_271_residues
MRQCARHAVRQRRAAFAQGSPEGARGRPRWRTGLRRCLARRRLRGQGIALAGHPLPVGQQHAETGEQLQARQLVVRQMPE
RAVHRLADQVLGQLRAIELHQCLRDAPGRLLVASLRQLPWQRGHAGREPLRGGGQLRGHGPDEFRLPQGVQDDGGPRGMG
THLLGQPRRLADQAAPQGLQGGAQAPGTLQAARRRCRLLRRGRTGRSTGGGRTRGAWRAVGVSGQSRVPGQGMGARQQRG
RMGELPRPGLLRPRSGRLGVGRRGLAAGRSQ
>Mature_271_residues
MRQCARHAVRQRRAAFAQGSPEGARGRPRWRTGLRRCLARRRLRGQGIALAGHPLPVGQQHAETGEQLQARQLVVRQMPE
RAVHRLADQVLGQLRAIELHQCLRDAPGRLLVASLRQLPWQRGHAGREPLRGGGQLRGHGPDEFRLPQGVQDDGGPRGMG
THLLGQPRRLADQAAPQGLQGGAQAPGTLQAARRRCRLLRRGRTGRSTGGGRTRGAWRAVGVSGQSRVPGQGMGARQQRG
RMGELPRPGLLRPRSGRLGVGRRGLAAGRSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29487; Mature: 29487

Theoretical pI: Translated: 12.75; Mature: 12.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQCARHAVRQRRAAFAQGSPEGARGRPRWRTGLRRCLARRRLRGQGIALAGHPLPVGQQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH
HAETGEQLQARQLVVRQMPERAVHRLADQVLGQLRAIELHQCLRDAPGRLLVASLRQLPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
QRGHAGREPLRGGGQLRGHGPDEFRLPQGVQDDGGPRGMGTHLLGQPRRLADQAAPQGLQ
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCC
GGAQAPGTLQAARRRCRLLRRGRTGRSTGGGRTRGAWRAVGVSGQSRVPGQGMGARQQRG
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCHHHCC
RMGELPRPGLLRPRSGRLGVGRRGLAAGRSQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQCARHAVRQRRAAFAQGSPEGARGRPRWRTGLRRCLARRRLRGQGIALAGHPLPVGQQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH
HAETGEQLQARQLVVRQMPERAVHRLADQVLGQLRAIELHQCLRDAPGRLLVASLRQLPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
QRGHAGREPLRGGGQLRGHGPDEFRLPQGVQDDGGPRGMGTHLLGQPRRLADQAAPQGLQ
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCC
GGAQAPGTLQAARRRCRLLRRGRTGRSTGGGRTRGAWRAVGVSGQSRVPGQGMGARQQRG
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCHHHCC
RMGELPRPGLLRPRSGRLGVGRRGLAAGRSQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA