Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is katE [H]
Identifier: 120612629
GI number: 120612629
Start: 4425027
End: 4427168
Strand: Direct
Name: katE [H]
Synonym: Aave_3991
Alternate gene names: 120612629
Gene position: 4425027-4427168 (Clockwise)
Preceding gene: 120612627
Following gene: 120612630
Centisome position: 82.67
GC content: 69.79
Gene sequence:
>2142_bases ATGCCCAAGAACACCCTCTCCCCCAGCGACTCCGCCGGAAAGAAGGCACCGCACAAGGTGCAGGCCGCCTCCGCCGCGGC CACCGGCGACACCGCGCGCGGCCAGGGCGGAGAACTGCAGCAGCAGGCCGGCGGCGGCCACCCGGTGCTCACCACGCAGC AGGGCATCCCCGTTGCGGACAACCAGAACTCGCTGCGCCCCACGCCGCGCGGGCCCACGCTGCTCGAGGATTTCATCCTG CGCGAGAAGATCACGCATTTCGACCACGAGCGCATTCCCGAGCGCATCGTGCATGCGCGCGGCAACGCGGCGCACGGCGT GTTCGAACTCACGGAAAGCCTGGAAAAGTACACCACCGCGCGCATCCTCACCGAGGTCGGCAGGCAGACGCCCGTGTTCT GCCGCTTCTCCACGGTGGCGGGCGGCGCGGGCTCGGTGGACACGCCGCGCGACGTGCGCGGCTTCGCCGTGAAGTTCTAC ACCGGCGAAGGCAACTGGGACCTGGTGGGCAACAACATCCCCGTGTTCTTCATCCAGGACGCGATGAAGTTCCCCGACCT CGTCCACGCCGTGAAGATGGAACCGGACCGCGCGTTCCCCCAGGCCGCGAGCGCGCACGACACGTTCTGGGATTTCATCT CGCTCATGCCCGAGAGCCTGCACATGATCATGTGGGCGATGAGCGACCGCACCATCCCGCGCAGCCTGCGCACGATGGAA GGCTTCGGCGTGCATTCCTTCCGCCTGCTCGACGCGCAGGGCGGGAGCACGTTCGTGAAGTTCCACTGGCGCCCGCGCCT GGGCATCCAATCGACCGTGTGGGACGAGGCGGTGAAGTTGCAGAGCGCCGACAACGATTTCCACCGGCGCGACCTGTTCG AGGCGATCCAGGCGGGCGACTTTCCCGAATGGGACCTGGCCGTGCAGCTCTTCACCGAGGAAGAGGCCGCGCGCTTCCCG TTCGACCACCTCGACCCGACCAAGCTGGTGCCGGAAGAACTCGTGCCCCTGAAGACCATCGGCCGCATGACCCTGAACCG CTGGCCCGACAACTTCTTCGCCGAAACCGAGCAGGTGGCCTTCTGCCCCGCCAACGTGCCGCCGGGCATCGATTTCTCGA ACGACCCGCTGCTGCAGGGACGCCTCTTCTCGTACCTGGACACGCAGCTCTCGCGCCTGGGCAGCCCGAACTTCGTGCAG ATCCCGATCAACGCGCCCAAGTGCCCGTTCCACAACATGCAGCGCGACGGCCACATGCAGATGCAGGTGCCCAAGGGCCG CGTGGCCTATGAGCCGAGCAGCCTGCAGCAGGACACGCCGCGCGCCTCCGTGGCCCAGGGATTCCGTCATTTCGCCGAGC GCCTGGCCGGCGACGACGGCGCCAAGGGCCGCCTGCGGCCGGAGAGCTTCGCCGACCACTACAGCCAGGCCCGCCTGTTC TACCGCAGCCAGAGCGCCATCGAGCAGGCGCACATGGCCTCCGCGCTGGTGTTCGAGCTGTCCAAGGTGGAGACCGAGCG CGTGCGCGTCGCCGTCGTCGCCCAGTTGCTGAACGTGGACGAGGGCCTGGCCCAGCGGGTCGCGGACGGCCTCGGCCTGC CGGAACTGCCTGCGCCCTTCCCGGCCGCGGCGCCCGCGCAGGACCTGCCGCTGTCGCCCGCGCTGCGCATCATCGACCGC ATGAAGCCCACGCTGCAGGGCCGCTGCATCGGCATCCTGGTGGCCGACGGATCCGCGCCGGAGGCGATCGCCGCGCTGCG CAAGGCGGCCGAGAAGGCCGGCGCGAAGGTGAAGATCGTGGCGCCCAAGGTCGGCGGCGCCGTACTGTCCGACGGATCGC GGCTGCCGGCCGATGGCCAGCTCGCGGGCACGCCGTCGGTGGTGTTCGACGCGGTGGCCTCCGTGCTCGCTCCCCAGGCC GGCGCACGGCTCGCCCGCGAAGCCGCGGCGGTGGACTGGTTCCGCGACGCCTACGGCCACCTCAAGGCGATCGCCGCCTG CAAGGGTTCCCAGCCCATTCTGGCGGCCGCCGGCATCGAGCCGGACGCCGGCGTGCTGGCCCCGGACGACGTCTCCGCCT TCATCGATGCGGCCGCGACCCGCCAGTGGGAACGCGAACCCAAGGTACGGATGCTGGCATGA
Upstream 100 bases:
>100_bases TCCCCAGCCAAAGCGCGCTTGTCCTACAGCCCCGTTCCCCATGGCGGAAAAAGATGCCGTTTTCCGCGACCAGCGGCCCA CTTCCCACAAGGAACGCCCC
Downstream 100 bases:
>100_bases TCCAGTCCCCCGCGCCGGCCCATGCCACCGATTTCCTCCGACCTTCCACCCCCGAACCCCTCCAAGGGACAGACCACTCC ATGACCCCGCTGCGTATCCT
Product: catalase
Products: NA
Alternate protein names: KAT2 [H]
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MPKNTLSPSDSAGKKAPHKVQAASAAATGDTARGQGGELQQQAGGGHPVLTTQQGIPVADNQNSLRPTPRGPTLLEDFIL REKITHFDHERIPERIVHARGNAAHGVFELTESLEKYTTARILTEVGRQTPVFCRFSTVAGGAGSVDTPRDVRGFAVKFY TGEGNWDLVGNNIPVFFIQDAMKFPDLVHAVKMEPDRAFPQAASAHDTFWDFISLMPESLHMIMWAMSDRTIPRSLRTME GFGVHSFRLLDAQGGSTFVKFHWRPRLGIQSTVWDEAVKLQSADNDFHRRDLFEAIQAGDFPEWDLAVQLFTEEEAARFP FDHLDPTKLVPEELVPLKTIGRMTLNRWPDNFFAETEQVAFCPANVPPGIDFSNDPLLQGRLFSYLDTQLSRLGSPNFVQ IPINAPKCPFHNMQRDGHMQMQVPKGRVAYEPSSLQQDTPRASVAQGFRHFAERLAGDDGAKGRLRPESFADHYSQARLF YRSQSAIEQAHMASALVFELSKVETERVRVAVVAQLLNVDEGLAQRVADGLGLPELPAPFPAAAPAQDLPLSPALRIIDR MKPTLQGRCIGILVADGSAPEAIAALRKAAEKAGAKVKIVAPKVGGAVLSDGSRLPADGQLAGTPSVVFDAVASVLAPQA GARLAREAAAVDWFRDAYGHLKAIAACKGSQPILAAAGIEPDAGVLAPDDVSAFIDAAATRQWEREPKVRMLA
Sequences:
>Translated_713_residues MPKNTLSPSDSAGKKAPHKVQAASAAATGDTARGQGGELQQQAGGGHPVLTTQQGIPVADNQNSLRPTPRGPTLLEDFIL REKITHFDHERIPERIVHARGNAAHGVFELTESLEKYTTARILTEVGRQTPVFCRFSTVAGGAGSVDTPRDVRGFAVKFY TGEGNWDLVGNNIPVFFIQDAMKFPDLVHAVKMEPDRAFPQAASAHDTFWDFISLMPESLHMIMWAMSDRTIPRSLRTME GFGVHSFRLLDAQGGSTFVKFHWRPRLGIQSTVWDEAVKLQSADNDFHRRDLFEAIQAGDFPEWDLAVQLFTEEEAARFP FDHLDPTKLVPEELVPLKTIGRMTLNRWPDNFFAETEQVAFCPANVPPGIDFSNDPLLQGRLFSYLDTQLSRLGSPNFVQ IPINAPKCPFHNMQRDGHMQMQVPKGRVAYEPSSLQQDTPRASVAQGFRHFAERLAGDDGAKGRLRPESFADHYSQARLF YRSQSAIEQAHMASALVFELSKVETERVRVAVVAQLLNVDEGLAQRVADGLGLPELPAPFPAAAPAQDLPLSPALRIIDR MKPTLQGRCIGILVADGSAPEAIAALRKAAEKAGAKVKIVAPKVGGAVLSDGSRLPADGQLAGTPSVVFDAVASVLAPQA GARLAREAAAVDWFRDAYGHLKAIAACKGSQPILAAAGIEPDAGVLAPDDVSAFIDAAATRQWEREPKVRMLA >Mature_712_residues PKNTLSPSDSAGKKAPHKVQAASAAATGDTARGQGGELQQQAGGGHPVLTTQQGIPVADNQNSLRPTPRGPTLLEDFILR EKITHFDHERIPERIVHARGNAAHGVFELTESLEKYTTARILTEVGRQTPVFCRFSTVAGGAGSVDTPRDVRGFAVKFYT GEGNWDLVGNNIPVFFIQDAMKFPDLVHAVKMEPDRAFPQAASAHDTFWDFISLMPESLHMIMWAMSDRTIPRSLRTMEG FGVHSFRLLDAQGGSTFVKFHWRPRLGIQSTVWDEAVKLQSADNDFHRRDLFEAIQAGDFPEWDLAVQLFTEEEAARFPF DHLDPTKLVPEELVPLKTIGRMTLNRWPDNFFAETEQVAFCPANVPPGIDFSNDPLLQGRLFSYLDTQLSRLGSPNFVQI PINAPKCPFHNMQRDGHMQMQVPKGRVAYEPSSLQQDTPRASVAQGFRHFAERLAGDDGAKGRLRPESFADHYSQARLFY RSQSAIEQAHMASALVFELSKVETERVRVAVVAQLLNVDEGLAQRVADGLGLPELPAPFPAAAPAQDLPLSPALRIIDRM KPTLQGRCIGILVADGSAPEAIAALRKAAEKAGAKVKIVAPKVGGAVLSDGSRLPADGQLAGTPSVVFDAVASVLAPQAG ARLAREAAAVDWFRDAYGHLKAIAACKGSQPILAAAGIEPDAGVLAPDDVSAFIDAAATRQWEREPKVRMLA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions requ
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=401, Percent_Identity=47.1321695760599, Blast_Score=382, Evalue=1e-106, Organism=Escherichia coli, GI48994891, Length=683, Percent_Identity=51.8301610541728, Blast_Score=670, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=400, Percent_Identity=45.75, Blast_Score=380, Evalue=1e-105, Organism=Caenorhabditis elegans, GI25147792, Length=438, Percent_Identity=44.0639269406393, Blast_Score=375, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25151141, Length=438, Percent_Identity=44.0639269406393, Blast_Score=375, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6320462, Length=403, Percent_Identity=40.1985111662531, Blast_Score=305, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6321525, Length=546, Percent_Identity=34.981684981685, Blast_Score=296, Evalue=1e-80, Organism=Drosophila melanogaster, GI17981717, Length=397, Percent_Identity=44.8362720403023, Blast_Score=351, Evalue=1e-96, Organism=Drosophila melanogaster, GI19920968, Length=420, Percent_Identity=41.1904761904762, Blast_Score=333, Evalue=3e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 77631; Mature: 77500
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00437 CATALASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKNTLSPSDSAGKKAPHKVQAASAAATGDTARGQGGELQQQAGGGHPVLTTQQGIPVAD CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCC NQNSLRPTPRGPTLLEDFILREKITHFDHERIPERIVHARGNAAHGVFELTESLEKYTTA CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RILTEVGRQTPVFCRFSTVAGGAGSVDTPRDVRGFAVKFYTGEGNWDLVGNNIPVFFIQD HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEECC AMKFPDLVHAVKMEPDRAFPQAASAHDTFWDFISLMPESLHMIMWAMSDRTIPRSLRTME HHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GFGVHSFRLLDAQGGSTFVKFHWRPRLGIQSTVWDEAVKLQSADNDFHRRDLFEAIQAGD CCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC FPEWDLAVQLFTEEEAARFPFDHLDPTKLVPEELVPLKTIGRMTLNRWPDNFFAETEQVA CCCCCEEEEEEECHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCHHHCCCCCEE FCPANVPPGIDFSNDPLLQGRLFSYLDTQLSRLGSPNFVQIPINAPKCPFHNMQRDGHMQ EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEE MQVPKGRVAYEPSSLQQDTPRASVAQGFRHFAERLAGDDGAKGRLRPESFADHYSQARLF EECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH YRSQSAIEQAHMASALVFELSKVETERVRVAVVAQLLNVDEGLAQRVADGLGLPELPAPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC PAAAPAQDLPLSPALRIIDRMKPTLQGRCIGILVADGSAPEAIAALRKAAEKAGAKVKIV CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEE APKVGGAVLSDGSRLPADGQLAGTPSVVFDAVASVLAPQAGARLAREAAAVDWFRDAYGH CCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LKAIAACKGSQPILAAAGIEPDAGVLAPDDVSAFIDAAATRQWEREPKVRMLA HHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure PKNTLSPSDSAGKKAPHKVQAASAAATGDTARGQGGELQQQAGGGHPVLTTQQGIPVAD CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCC NQNSLRPTPRGPTLLEDFILREKITHFDHERIPERIVHARGNAAHGVFELTESLEKYTTA CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RILTEVGRQTPVFCRFSTVAGGAGSVDTPRDVRGFAVKFYTGEGNWDLVGNNIPVFFIQD HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCEEEECC AMKFPDLVHAVKMEPDRAFPQAASAHDTFWDFISLMPESLHMIMWAMSDRTIPRSLRTME HHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GFGVHSFRLLDAQGGSTFVKFHWRPRLGIQSTVWDEAVKLQSADNDFHRRDLFEAIQAGD CCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC FPEWDLAVQLFTEEEAARFPFDHLDPTKLVPEELVPLKTIGRMTLNRWPDNFFAETEQVA CCCCCEEEEEEECHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCHHHCCCCCEE FCPANVPPGIDFSNDPLLQGRLFSYLDTQLSRLGSPNFVQIPINAPKCPFHNMQRDGHMQ EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEE MQVPKGRVAYEPSSLQQDTPRASVAQGFRHFAERLAGDDGAKGRLRPESFADHYSQARLF EECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH YRSQSAIEQAHMASALVFELSKVETERVRVAVVAQLLNVDEGLAQRVADGLGLPELPAPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC PAAAPAQDLPLSPALRIIDRMKPTLQGRCIGILVADGSAPEAIAALRKAAEKAGAKVKIV CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEE APKVGGAVLSDGSRLPADGQLAGTPSVVFDAVASVLAPQAGARLAREAAAVDWFRDAYGH CCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LKAIAACKGSQPILAAAGIEPDAGVLAPDDVSAFIDAAATRQWEREPKVRMLA HHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10198032; 11481431 [H]