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The map label for this gene is ctaA [H]

Identifier: 120612539

GI number: 120612539

Start: 4323432

End: 4324646

Strand: Reverse

Name: ctaA [H]

Synonym: Aave_3900

Alternate gene names: 120612539

Gene position: 4324646-4323432 (Counterclockwise)

Preceding gene: 120612540

Following gene: 120612538

Centisome position: 80.79

GC content: 72.76

Gene sequence:

>1215_bases
ATGAACGCCGCCCAGCCGCTCTACGATTTCGCGCCGCTCGCCGAACTGATGCTGCTCGGCCTCGCGATCGCCCTCGGCCC
GCTGGCCTGGGTGGCATGGCGCAACCGCCATGGTTCGCCCGTGCGGCGCTGGCAGGCGCTGGCGATCCTCACGCTCTTCC
TCACGTTCGACCTGGTACTGTTCGGCGCCTTCACCCGGCTCACCGATTCCGGCCTGGGCTGCCCCGACTGGCCCGGCTGC
TACGGCAATGCGAGCCCGGTGGGCGCCCGCGCGGAAATCTCCGCCGCCCAGGAAGCCATGCCCACCGGCCCGGTCACGCA
CCGCAAGGCGTGGGTGGAGATGGTCCACCGCTACCTGGCCTCCGCGGTGGGCGTGCTCATCATCGCGCTCACGGCGGGGG
CATGGTGGCAGTGGCGCCGCAGCCGCCGGGCAGGCCCGGATGCCGCGCAGGAGCGCATGGCCGTGCATCCCTGGTGGCCT
ACGGCCACGCTCGTGTGGGTCTGCCTGCAGGGAGCGTTCGGTGCCTGGACGGTGACCATGAAGCTTTTCCCCGCCATCGT
CACGCTGCACCTCGTCGGCGGCATCGTGCTGCTGGCCCTGCTGTGCGTGCAGGCCGTGCGCCAGACCCAGGCTTCGCGCG
GCATCGCGCCCGCCGCCCTCGCACCGGGCCTGCGCGCGCTGCTCGTGCTGACGGCGATGCTGGTGGGCCTGCAGATCCTG
CTGGGCGGCTGGGTGAGCACCAACTACGCCGTCCTCGCCTGCTCCACCTTCCCCACCTGCCAGGGCAACTGGTGGCCCGA
CATGGCTTTCGCGGAGGGCTTCCAGATCTGGCGGCCCCTCGGCCTGCTGCAGGACGGCAGCCACATCAGCTTCGCCGGCC
TCACCGCCATCCACTATGCGCACCGGCTGGCGGCCTATGCCGTGCTGGCCGCGCTCGCCCTGCTGGCCTGGCGCCTGCGC
GCCGTGCCGGCGCTGCGGCCGCAGGCCCGCTGGCTGGCGGGGCTGGCGCTGCTGCAGTTCGCCACCGGGCTGTCCAACGT
CGTGCTCGACTGGCCGCTGGTCGCCGCCGTGCTCCACACCGGCGGCGCGGCCGCCCTCGTCGTCGCGCTCACCTGGACCC
TGGCCGCCAGCCGGGCCGTGGGCGCCAGGGACAAAATGTCCACCCCCCGCGCGATTGAAACCGCCGCGGGCGCCCCGAGA
ATTTCTTCGCCATGA

Upstream 100 bases:

>100_bases
GCCTCGTCATCGTGGGACCAGCCGGGCCGCCCGGAGGCGCAGCCATGAGCCGGGCCCATCCGCGCGCGTGCGGGGCGATA
CCCGCCGGAGGTGCCGTGCA

Downstream 100 bases:

>100_bases
GTGCCGCTTCCGCTTCCACCGCCCCCCAGGCGGTTTCGTCCCGCTTCTCGCAGTTCTACGCGCTGACCAAGCCGCGCGTG
GTCCAGCTCATCGTTTTCTG

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNAAQPLYDFAPLAELMLLGLAIALGPLAWVAWRNRHGSPVRRWQALAILTLFLTFDLVLFGAFTRLTDSGLGCPDWPGC
YGNASPVGARAEISAAQEAMPTGPVTHRKAWVEMVHRYLASAVGVLIIALTAGAWWQWRRSRRAGPDAAQERMAVHPWWP
TATLVWVCLQGAFGAWTVTMKLFPAIVTLHLVGGIVLLALLCVQAVRQTQASRGIAPAALAPGLRALLVLTAMLVGLQIL
LGGWVSTNYAVLACSTFPTCQGNWWPDMAFAEGFQIWRPLGLLQDGSHISFAGLTAIHYAHRLAAYAVLAALALLAWRLR
AVPALRPQARWLAGLALLQFATGLSNVVLDWPLVAAVLHTGGAAALVVALTWTLAASRAVGARDKMSTPRAIETAAGAPR
ISSP

Sequences:

>Translated_404_residues
MNAAQPLYDFAPLAELMLLGLAIALGPLAWVAWRNRHGSPVRRWQALAILTLFLTFDLVLFGAFTRLTDSGLGCPDWPGC
YGNASPVGARAEISAAQEAMPTGPVTHRKAWVEMVHRYLASAVGVLIIALTAGAWWQWRRSRRAGPDAAQERMAVHPWWP
TATLVWVCLQGAFGAWTVTMKLFPAIVTLHLVGGIVLLALLCVQAVRQTQASRGIAPAALAPGLRALLVLTAMLVGLQIL
LGGWVSTNYAVLACSTFPTCQGNWWPDMAFAEGFQIWRPLGLLQDGSHISFAGLTAIHYAHRLAAYAVLAALALLAWRLR
AVPALRPQARWLAGLALLQFATGLSNVVLDWPLVAAVLHTGGAAALVVALTWTLAASRAVGARDKMSTPRAIETAAGAPR
ISSP
>Mature_404_residues
MNAAQPLYDFAPLAELMLLGLAIALGPLAWVAWRNRHGSPVRRWQALAILTLFLTFDLVLFGAFTRLTDSGLGCPDWPGC
YGNASPVGARAEISAAQEAMPTGPVTHRKAWVEMVHRYLASAVGVLIIALTAGAWWQWRRSRRAGPDAAQERMAVHPWWP
TATLVWVCLQGAFGAWTVTMKLFPAIVTLHLVGGIVLLALLCVQAVRQTQASRGIAPAALAPGLRALLVLTAMLVGLQIL
LGGWVSTNYAVLACSTFPTCQGNWWPDMAFAEGFQIWRPLGLLQDGSHISFAGLTAIHYAHRLAAYAVLAALALLAWRLR
AVPALRPQARWLAGLALLQFATGLSNVVLDWPLVAAVLHTGGAAALVVALTWTLAASRAVGARDKMSTPRAIETAAGAPR
ISSP

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group. Also involved in the sporulation [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 43253; Mature: 43253

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MNAAQPLYDFAPLAELMLLGLAIALGPLAWVAWRNRHGSPVRRWQALAILTLFLTFDLVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FGAFTRLTDSGLGCPDWPGCYGNASPVGARAEISAAQEAMPTGPVTHRKAWVEMVHRYLA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
SAVGVLIIALTAGAWWQWRRSRRAGPDAAQERMAVHPWWPTATLVWVCLQGAFGAWTVTM
HHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
KLFPAIVTLHLVGGIVLLALLCVQAVRQTQASRGIAPAALAPGLRALLVLTAMLVGLQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LGGWVSTNYAVLACSTFPTCQGNWWPDMAFAEGFQIWRPLGLLQDGSHISFAGLTAIHYA
HHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
HRLAAYAVLAALALLAWRLRAVPALRPQARWLAGLALLQFATGLSNVVLDWPLVAAVLHT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGAAALVVALTWTLAASRAVGARDKMSTPRAIETAAGAPRISSP
CCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]