Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is cysU [C]
Identifier: 120612529
GI number: 120612529
Start: 4312950
End: 4314605
Strand: Reverse
Name: cysU [C]
Synonym: Aave_3889
Alternate gene names: 120612529
Gene position: 4314605-4312950 (Counterclockwise)
Preceding gene: 120612530
Following gene: 120612528
Centisome position: 80.61
GC content: 68.12
Gene sequence:
>1656_bases ATGCTGGGCACGCTGCGTCGCGATCCCGCATGGCTGGCGCTCGGCATCGGCGCCATCGCGCTGCTGCTGGTGTTTCTCGG CTGGCCGCTGGTCGGCATGCTGGCCAAGTCGTTCATCGGTGCGGACGGCCGGGTAGGCCTGGGCGGCTACGTGCGGTTCT TCGCGGACCGCACCTACCGCGAGGTCTTCGTCAACACGTTGATCCTCGGCGTTGCGGTCACCGCGACCTCCATGCTCGTG GGGGGATGCCTCGCCCTGGTCGTGGCCCGCTGCAGGTTCCCGCTGGCCGGCCTGGTCACGGCGCTACCGCTCATCACCCT CGTCATTCCCGACGTGGTGGTGGCGACTGCCTGGCTGCTGATCCTGGGAAAGCAGGGCCTGGTCAATGCGCTGCTGGCCC CGCTCGGCATCGAACTGCCGATGCTGTACTCCTGGTGGGGCATGGTCTTCGTGATGACGCTGAACAACTACGTGTACGCC TTCGTCGCGGTGCTCGTGGGTTTGAAGTCGATGGACCGCAACTTGGAGGAGGCGGCCCTGAGCCTCGGCCGGCCGCTCCC GCACGTGCTGGGCGGCGTGACGCTGCCGCTGCTGCTGCCCTCGGTGTTCGCCGGCGCGCTGATTGTCTTCACCCATGTGA TCGGCAGCTTCGGCGTGCCCGCCATCCTGGGCGCCCGCACGCCGGTGCTGGCCGTGAAGGCCTACAACGAGTTCGTGAGC GAGATGGGCGGCAATCCCCAGATGCAGACCACCATGGCGTCGCTGCTGGTGTGCCTGGGCGCGGGGTTGCTGCTGGTGCA GAAGTTCATCGTCGAGCGGCGGCAGTTCCAGATGGAGGCCGGCCGTACGCCCCCTGCGCTCACCATCCGGGGCGTGCCGG CGGTGCTGGCCAGCGGCGGCGTGCTGTTCGTGGTGGCGCTCTCGCTGCTGCCGGCGCTGGTGGTGGTGGTCACGGCCTTC ACGCCCTCCGTGGGGCCGGTGCTGCGCTATGGCGGCTTCACGCTGGCGCATCTGCAGTACGCCCTGGTGCGCGCACCGGA GCCGCTCTACAACTCGCTGTTCCTGGCATCGGTGGCGACGGCGGCGGGCGTGCTGTTCTCGGTGGTCTCGGCCTACCTCA TCGTCAAGCGCCGGTCGCCGCTCACGCATGCGCTGGACGTGCTGGTGATGCTGCCGCTGACGATCGCGGGCACGGTGCTG GGCATCGCCCTCATCAACGCCTTCAACACGGGATGGCTGGTGCTGACGGGCAGCTGGGTGGTCATGGCGCTGGCGTACTT CCTGCGCCGCGTGCCCACCAGCGTGCGCGCCGCGGTCGGGCCGCTGCACAACCTCAAGGACTCCATCGAGGAGGCTTCCA TGAGCCTGGGCGTCAGCGCGCTCAAGAGCTTCTTCCGCGTGGTGCTGCCCGTCATCGGCCCGTCCGTGGTCGCCGCGGCC GTGCTGATGTGGGTGACCACGCTGTCGGAACTCTCGGCCACCGTGGTGCTGTATTTCGGTGGCATGAACACCATGCCCAT CGAAATCTTCCAGCAGATCGACAGCGGGCGCATGGCCCTGGCATGCGCGTACAGCCTCGTGCTGCTGCTGACGATCTTCG TGCCGCTCGGGCTGGCGCGCTGGCTCTTCCGGCTCAAGGTCGGAACTCTTGATTGA
Upstream 100 bases:
>100_bases GTGGACGCGCGCACCGGGGCGCCGGCACGCGCACCGGGGCGCGGCGAGACGGTCGCGCTCCGCGTGCCGCCGCACGCCCA CATCGTGCAGGGGGCCTGAG
Downstream 100 bases:
>100_bases ACCCCATGACTGATACCCAACCACACCCTTTCCTCGCCCGGCGCGTCCTGGGCGCCAAGCCTTCGGCCACCAAAGAAATG ACGCGGCTGGCCAACCAGCT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MLGTLRRDPAWLALGIGAIALLLVFLGWPLVGMLAKSFIGADGRVGLGGYVRFFADRTYREVFVNTLILGVAVTATSMLV GGCLALVVARCRFPLAGLVTALPLITLVIPDVVVATAWLLILGKQGLVNALLAPLGIELPMLYSWWGMVFVMTLNNYVYA FVAVLVGLKSMDRNLEEAALSLGRPLPHVLGGVTLPLLLPSVFAGALIVFTHVIGSFGVPAILGARTPVLAVKAYNEFVS EMGGNPQMQTTMASLLVCLGAGLLLVQKFIVERRQFQMEAGRTPPALTIRGVPAVLASGGVLFVVALSLLPALVVVVTAF TPSVGPVLRYGGFTLAHLQYALVRAPEPLYNSLFLASVATAAGVLFSVVSAYLIVKRRSPLTHALDVLVMLPLTIAGTVL GIALINAFNTGWLVLTGSWVVMALAYFLRRVPTSVRAAVGPLHNLKDSIEEASMSLGVSALKSFFRVVLPVIGPSVVAAA VLMWVTTLSELSATVVLYFGGMNTMPIEIFQQIDSGRMALACAYSLVLLLTIFVPLGLARWLFRLKVGTLD
Sequences:
>Translated_551_residues MLGTLRRDPAWLALGIGAIALLLVFLGWPLVGMLAKSFIGADGRVGLGGYVRFFADRTYREVFVNTLILGVAVTATSMLV GGCLALVVARCRFPLAGLVTALPLITLVIPDVVVATAWLLILGKQGLVNALLAPLGIELPMLYSWWGMVFVMTLNNYVYA FVAVLVGLKSMDRNLEEAALSLGRPLPHVLGGVTLPLLLPSVFAGALIVFTHVIGSFGVPAILGARTPVLAVKAYNEFVS EMGGNPQMQTTMASLLVCLGAGLLLVQKFIVERRQFQMEAGRTPPALTIRGVPAVLASGGVLFVVALSLLPALVVVVTAF TPSVGPVLRYGGFTLAHLQYALVRAPEPLYNSLFLASVATAAGVLFSVVSAYLIVKRRSPLTHALDVLVMLPLTIAGTVL GIALINAFNTGWLVLTGSWVVMALAYFLRRVPTSVRAAVGPLHNLKDSIEEASMSLGVSALKSFFRVVLPVIGPSVVAAA VLMWVTTLSELSATVVLYFGGMNTMPIEIFQQIDSGRMALACAYSLVLLLTIFVPLGLARWLFRLKVGTLD >Mature_551_residues MLGTLRRDPAWLALGIGAIALLLVFLGWPLVGMLAKSFIGADGRVGLGGYVRFFADRTYREVFVNTLILGVAVTATSMLV GGCLALVVARCRFPLAGLVTALPLITLVIPDVVVATAWLLILGKQGLVNALLAPLGIELPMLYSWWGMVFVMTLNNYVYA FVAVLVGLKSMDRNLEEAALSLGRPLPHVLGGVTLPLLLPSVFAGALIVFTHVIGSFGVPAILGARTPVLAVKAYNEFVS EMGGNPQMQTTMASLLVCLGAGLLLVQKFIVERRQFQMEAGRTPPALTIRGVPAVLASGGVLFVVALSLLPALVVVVTAF TPSVGPVLRYGGFTLAHLQYALVRAPEPLYNSLFLASVATAAGVLFSVVSAYLIVKRRSPLTHALDVLVMLPLTIAGTVL GIALINAFNTGWLVLTGSWVVMALAYFLRRVPTSVRAAVGPLHNLKDSIEEASMSLGVSALKSFFRVVLPVIGPSVVAAA VLMWVTTLSELSATVVLYFGGMNTMPIEIFQQIDSGRMALACAYSLVLLLTIFVPLGLARWLFRLKVGTLD
Specific function: Probably part of the binding-protein-dependent transport system y4fNOP. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=156, Percent_Identity=30.1282051282051, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 58549; Mature: 58549
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGTLRRDPAWLALGIGAIALLLVFLGWPLVGMLAKSFIGADGRVGLGGYVRFFADRTYR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH EVFVNTLILGVAVTATSMLVGGCLALVVARCRFPLAGLVTALPLITLVIPDVVVATAWLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILGKQGLVNALLAPLGIELPMLYSWWGMVFVMTLNNYVYAFVAVLVGLKSMDRNLEEAAL HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SLGRPLPHVLGGVTLPLLLPSVFAGALIVFTHVIGSFGVPAILGARTPVLAVKAYNEFVS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH EMGGNPQMQTTMASLLVCLGAGLLLVQKFIVERRQFQMEAGRTPPALTIRGVPAVLASGG HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCH VLFVVALSLLPALVVVVTAFTPSVGPVLRYGGFTLAHLQYALVRAPEPLYNSLFLASVAT HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AAGVLFSVVSAYLIVKRRSPLTHALDVLVMLPLTIAGTVLGIALINAFNTGWLVLTGSWV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHH VMALAYFLRRVPTSVRAAVGPLHNLKDSIEEASMSLGVSALKSFFRVVLPVIGPSVVAAA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VLMWVTTLSELSATVVLYFGGMNTMPIEIFQQIDSGRMALACAYSLVLLLTIFVPLGLAR HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH WLFRLKVGTLD HHHHHHCCCCC >Mature Secondary Structure MLGTLRRDPAWLALGIGAIALLLVFLGWPLVGMLAKSFIGADGRVGLGGYVRFFADRTYR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH EVFVNTLILGVAVTATSMLVGGCLALVVARCRFPLAGLVTALPLITLVIPDVVVATAWLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILGKQGLVNALLAPLGIELPMLYSWWGMVFVMTLNNYVYAFVAVLVGLKSMDRNLEEAAL HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SLGRPLPHVLGGVTLPLLLPSVFAGALIVFTHVIGSFGVPAILGARTPVLAVKAYNEFVS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH EMGGNPQMQTTMASLLVCLGAGLLLVQKFIVERRQFQMEAGRTPPALTIRGVPAVLASGG HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCH VLFVVALSLLPALVVVVTAFTPSVGPVLRYGGFTLAHLQYALVRAPEPLYNSLFLASVAT HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AAGVLFSVVSAYLIVKRRSPLTHALDVLVMLPLTIAGTVLGIALINAFNTGWLVLTGSWV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHH VMALAYFLRRVPTSVRAAVGPLHNLKDSIEEASMSLGVSALKSFFRVVLPVIGPSVVAAA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH VLMWVTTLSELSATVVLYFGGMNTMPIEIFQQIDSGRMALACAYSLVLLLTIFVPLGLAR HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH WLFRLKVGTLD HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]