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The map label for this gene is ftsY [H]

Identifier: 120612515

GI number: 120612515

Start: 4298154

End: 4299071

Strand: Direct

Name: ftsY [H]

Synonym: Aave_3874

Alternate gene names: 120612515

Gene position: 4298154-4299071 (Clockwise)

Preceding gene: 120612509

Following gene: 120612518

Centisome position: 80.3

GC content: 69.28

Gene sequence:

>918_bases
ATGCAGGAAGCCGGACAGGAACGCAAGGGCTGGCTGGACCGGCTCAAGAACGGACTGCGCAAGACGGGCACCAGCATCGC
CACGGTCTTCACCGGAACGCAGATCAGCGATGCGCTCTACGACGAACTCGAAGAAGCGCTGCTGATGGCCGACACGGGCG
TCAAGGCCACCGAACACCTGCTGCAGGACCTCCGGCGGCGCGTGAAGGAATCCAAGGCCACCGATCCCGCGGCGGTCAAG
GGGCTGCTCGCCGACGCGCTGGCCGACCTGCTGCGCCCGCTCGAGAAACCCCTGGAGATCGGACGCCACACGCCCACCGT
GATCATGGTGGCCGGCGTCAACGGGGCCGGCAAGACCACCTCCATCGGCAAGCTCACCAGGCACCTGGCCACCGAAGGCG
CCGCGGTCCTGCTGGCGGCGGCCGACACCTTCCGGGCCGCCGCGCGGGAGCAGCTCGGCGTGTGGGCCGACCGCAATACC
GTGGAAATCGTGAGCCAGGAGGGCGGCGACCCGGCCGCGGTGAGCTTCGATGCCGTGAGCGCCGGCAAGGCACGCGGCAA
GGACGTGGTGCTGGTGGACACGGCGGGCCGGCTGCCGACGCAGCTCCACCTGATGCAGGAGCTGCAGAAGATCAAGCGCG
TCATCACCAAGGCCGATGGCACGGCGCCGCACGAGGTGCTCCTGGTGATCGACGGCAACACGGGCCAGAACGCCCTCGCG
CAGGTGCGGGCCTTCGACGACGCGCTGCAGCTCACCGGGCTCGTCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGT
GCTGGCAGCCATCGCGCAGGAGCGCCCCATACCGGTGTATTTCATCGGCGTCGGCGAGAAGCTGGAAGACCTGGAAACCT
TCAGCGCCCGCGAGTTCGCGCAGGCCCTGCTCGCCTGA

Upstream 100 bases:

>100_bases
TGCGCCAGCGCCGATGCCGGGGCCCTTCCCTGCCGCCGATGCTCCGGTGCCCCCGCCGCCCACCATGCCGCCGGCGCCGG
CGGTCTCCGCATCCGTGCCC

Downstream 100 bases:

>100_bases
GGCAGGGCCCGCACCGGAACCGGAGCACGGAACGGATCAGCGCGCCCAGGCGCGCGTGGCCTGCCGCTGCTCGCCCAGGC
CTTCGATGCCCAGCCGCATG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MQEAGQERKGWLDRLKNGLRKTGTSIATVFTGTQISDALYDELEEALLMADTGVKATEHLLQDLRRRVKESKATDPAAVK
GLLADALADLLRPLEKPLEIGRHTPTVIMVAGVNGAGKTTSIGKLTRHLATEGAAVLLAAADTFRAAAREQLGVWADRNT
VEIVSQEGGDPAAVSFDAVSAGKARGKDVVLVDTAGRLPTQLHLMQELQKIKRVITKADGTAPHEVLLVIDGNTGQNALA
QVRAFDDALQLTGLVVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKLEDLETFSAREFAQALLA

Sequences:

>Translated_305_residues
MQEAGQERKGWLDRLKNGLRKTGTSIATVFTGTQISDALYDELEEALLMADTGVKATEHLLQDLRRRVKESKATDPAAVK
GLLADALADLLRPLEKPLEIGRHTPTVIMVAGVNGAGKTTSIGKLTRHLATEGAAVLLAAADTFRAAAREQLGVWADRNT
VEIVSQEGGDPAAVSFDAVSAGKARGKDVVLVDTAGRLPTQLHLMQELQKIKRVITKADGTAPHEVLLVIDGNTGQNALA
QVRAFDDALQLTGLVVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKLEDLETFSAREFAQALLA
>Mature_305_residues
MQEAGQERKGWLDRLKNGLRKTGTSIATVFTGTQISDALYDELEEALLMADTGVKATEHLLQDLRRRVKESKATDPAAVK
GLLADALADLLRPLEKPLEIGRHTPTVIMVAGVNGAGKTTSIGKLTRHLATEGAAVLLAAADTFRAAAREQLGVWADRNT
VEIVSQEGGDPAAVSFDAVSAGKARGKDVVLVDTAGRLPTQLHLMQELQKIKRVITKADGTAPHEVLLVIDGNTGQNALA
QVRAFDDALQLTGLVVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKLEDLETFSAREFAQALLA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=296, Percent_Identity=30.7432432432432, Blast_Score=131, Evalue=7e-31,
Organism=Homo sapiens, GI226371618, Length=208, Percent_Identity=35.5769230769231, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI23308697, Length=302, Percent_Identity=31.1258278145695, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI295424842, Length=302, Percent_Identity=31.1258278145695, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=34.5588235294118, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1789874, Length=303, Percent_Identity=48.1848184818482, Blast_Score=269, Evalue=1e-73,
Organism=Escherichia coli, GI1788963, Length=308, Percent_Identity=34.7402597402597, Blast_Score=134, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17539958, Length=297, Percent_Identity=29.2929292929293, Blast_Score=130, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=300, Percent_Identity=31.6666666666667, Blast_Score=103, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=281, Percent_Identity=32.7402135231317, Blast_Score=136, Evalue=3e-33,
Organism=Drosophila melanogaster, GI17647949, Length=295, Percent_Identity=30.1694915254237, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24641198, Length=261, Percent_Identity=31.0344827586207, Blast_Score=95, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 32398; Mature: 32398

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEAGQERKGWLDRLKNGLRKTGTSIATVFTGTQISDALYDELEEALLMADTGVKATEHL
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQDLRRRVKESKATDPAAVKGLLADALADLLRPLEKPLEIGRHTPTVIMVAGVNGAGKTT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
SIGKLTRHLATEGAAVLLAAADTFRAAAREQLGVWADRNTVEIVSQEGGDPAAVSFDAVS
HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCC
AGKARGKDVVLVDTAGRLPTQLHLMQELQKIKRVITKADGTAPHEVLLVIDGNTGQNALA
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
QVRAFDDALQLTGLVVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKLEDLETFSAREFA
HHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHH
QALLA
HHHCC
>Mature Secondary Structure
MQEAGQERKGWLDRLKNGLRKTGTSIATVFTGTQISDALYDELEEALLMADTGVKATEHL
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQDLRRRVKESKATDPAAVKGLLADALADLLRPLEKPLEIGRHTPTVIMVAGVNGAGKTT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
SIGKLTRHLATEGAAVLLAAADTFRAAAREQLGVWADRNTVEIVSQEGGDPAAVSFDAVS
HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCC
AGKARGKDVVLVDTAGRLPTQLHLMQELQKIKRVITKADGTAPHEVLLVIDGNTGQNALA
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
QVRAFDDALQLTGLVVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKLEDLETFSAREFA
HHHHHHHHHHHHHEEEEECCCCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHH
QALLA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]