Click here to switch to the map view.

The map label for this gene is 120612509

Identifier: 120612509

GI number: 120612509

Start: 4292534

End: 4293613

Strand: Direct

Name: 120612509

Synonym: Aave_3868

Alternate gene names: NA

Gene position: 4292534-4293613 (Clockwise)

Preceding gene: 120612508

Following gene: 120612515

Centisome position: 80.19

GC content: 68.24

Gene sequence:

>1080_bases
ATGCAGGTTTTCAATTGCGACCAATGCGGTCATCTCGTTTTCTTCGACAGCGTCCAGTGCCTCCACTGCGGCGCCAAGCT
GGCGTTCCTGCCCGACCAGCTGACCATGGCTGCCCTGGTGCCGGCCGTGCCGGGCCTGCAGGGCGATGCCGACCTGTGGC
AGCGGGTGCCGTCGCGCCGCCAGGGCAGCGCTTCACCGCTGTACCGGCTTTGCCACAACCGGATAGCGCACGCCGCCTGC
AACTTCGCGGTGGCGGCCGATGATCCGCAGCAGCTGTGCGGGTCCTGCCGCCAGACGCGCATCCTTCCCGACCTTTCCGA
ACCTGCCAACCTGCGCCGCTGGAAACAGATCGAGCATGCCAAGCGGCAGCTCTACTACACGCTCGCGCGCCTGGGCCTGC
AGCCCGCGCCGGACGGTGCAAGCCCGGTCTTCGAGTTCCTGGCCGACCAGCCCGGCCAACCCGTGATGACGGGACACGCC
GCCGGGACGATCACGCTCAACGTGGCCGAGGCGGACGACGATGAACGGGCCCGGCGGCGGCTCGCCCTGCACGAACCCTA
CCGCACCCTGCTGGGCCACCTGCGGCACGAATCGGGACACTTCTACTGGGACCATCTGCTGCTGGGCTCCGGCCGGCTGG
AAGAGTTTCGCGCGGTCTTCGGCGACGAGCGCCAGGACTACGGCGCCGCCCTGCAGGCCTACTACGCCAGCAGTCCGCAC
CTGGGCGCGTGGCGCGAACGCCATGTGAGCGCTTATGCCACCGCCCACCCCTGGGAAGACTGGGCCGAGACCTGGGCCCA
TTACCTGCACATGGTGGATCTGCTGGAGACGGCCGCCAGCTATCACACGGGCCTCGATATCCCCGAAAACGGCGCCATCC
AGACCTACCGCGTGGGCAATCCATTCGCCAGCGACCGGCCGGACTTCGACGCGATGGTGCAGGAATGGGTGCCCCTGACG
CTGCTGCTCAACAGCCTGAACCGCAGCCTCGGGCAGCAGGATGCCTACCCGTTCGCGCTGTCGTCCGGCGCGCTGGCCAA
GCTGCGCTTCGTGCACGACATCGTGCACGCCACCGCCTGA

Upstream 100 bases:

>100_bases
TTCTTGTGCCGCCTTCTGCACAGCCGCCCAGGGCATCCACGCGCCAGGCGGTTCGCCCAGAGCCGTACGAAGAGGCCTAC
AGGCCCTATGCTCCGCGACC

Downstream 100 bases:

>100_bases
CGCGCCGCCACGGCGCGTGGCCTCAGGGGGCCGGAGCCATCCCGCGGACCTTGGCGGCGAGGCGCTGGCAGACTCCGGGA
GAAACGAATTTGTCCACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MQVFNCDQCGHLVFFDSVQCLHCGAKLAFLPDQLTMAALVPAVPGLQGDADLWQRVPSRRQGSASPLYRLCHNRIAHAAC
NFAVAADDPQQLCGSCRQTRILPDLSEPANLRRWKQIEHAKRQLYYTLARLGLQPAPDGASPVFEFLADQPGQPVMTGHA
AGTITLNVAEADDDERARRRLALHEPYRTLLGHLRHESGHFYWDHLLLGSGRLEEFRAVFGDERQDYGAALQAYYASSPH
LGAWRERHVSAYATAHPWEDWAETWAHYLHMVDLLETAASYHTGLDIPENGAIQTYRVGNPFASDRPDFDAMVQEWVPLT
LLLNSLNRSLGQQDAYPFALSSGALAKLRFVHDIVHATA

Sequences:

>Translated_359_residues
MQVFNCDQCGHLVFFDSVQCLHCGAKLAFLPDQLTMAALVPAVPGLQGDADLWQRVPSRRQGSASPLYRLCHNRIAHAAC
NFAVAADDPQQLCGSCRQTRILPDLSEPANLRRWKQIEHAKRQLYYTLARLGLQPAPDGASPVFEFLADQPGQPVMTGHA
AGTITLNVAEADDDERARRRLALHEPYRTLLGHLRHESGHFYWDHLLLGSGRLEEFRAVFGDERQDYGAALQAYYASSPH
LGAWRERHVSAYATAHPWEDWAETWAHYLHMVDLLETAASYHTGLDIPENGAIQTYRVGNPFASDRPDFDAMVQEWVPLT
LLLNSLNRSLGQQDAYPFALSSGALAKLRFVHDIVHATA
>Mature_359_residues
MQVFNCDQCGHLVFFDSVQCLHCGAKLAFLPDQLTMAALVPAVPGLQGDADLWQRVPSRRQGSASPLYRLCHNRIAHAAC
NFAVAADDPQQLCGSCRQTRILPDLSEPANLRRWKQIEHAKRQLYYTLARLGLQPAPDGASPVFEFLADQPGQPVMTGHA
AGTITLNVAEADDDERARRRLALHEPYRTLLGHLRHESGHFYWDHLLLGSGRLEEFRAVFGDERQDYGAALQAYYASSPH
LGAWRERHVSAYATAHPWEDWAETWAHYLHMVDLLETAASYHTGLDIPENGAIQTYRVGNPFASDRPDFDAMVQEWVPLT
LLLNSLNRSLGQQDAYPFALSSGALAKLRFVHDIVHATA

Specific function: Unknown

COG id: COG4307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011201 [H]

Pfam domain/function: PF10005 DUF2248 [H]

EC number: NA

Molecular weight: Translated: 40127; Mature: 40127

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFNCDQCGHLVFFDSVQCLHCGAKLAFLPDQLTMAALVPAVPGLQGDADLWQRVPSRR
CCCCCCCCCCCEEEECCCHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHCCCCC
QGSASPLYRLCHNRIAHAACNFAVAADDPQQLCGSCRQTRILPDLSEPANLRRWKQIEHA
CCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
KRQLYYTLARLGLQPAPDGASPVFEFLADQPGQPVMTGHAAGTITLNVAEADDDERARRR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEECCCCEEEEEEEECCCCHHHHHHH
LALHEPYRTLLGHLRHESGHFYWDHLLLGSGRLEEFRAVFGDERQDYGAALQAYYASSPH
HHHHHHHHHHHHHHHHCCCCEEEEHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
LGAWRERHVSAYATAHPWEDWAETWAHYLHMVDLLETAASYHTGLDIPENGAIQTYRVGN
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
PFASDRPDFDAMVQEWVPLTLLLNSLNRSLGQQDAYPFALSSGALAKLRFVHDIVHATA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQVFNCDQCGHLVFFDSVQCLHCGAKLAFLPDQLTMAALVPAVPGLQGDADLWQRVPSRR
CCCCCCCCCCCEEEECCCHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHCCCCC
QGSASPLYRLCHNRIAHAACNFAVAADDPQQLCGSCRQTRILPDLSEPANLRRWKQIEHA
CCCCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
KRQLYYTLARLGLQPAPDGASPVFEFLADQPGQPVMTGHAAGTITLNVAEADDDERARRR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEECCCCEEEEEEEECCCCHHHHHHH
LALHEPYRTLLGHLRHESGHFYWDHLLLGSGRLEEFRAVFGDERQDYGAALQAYYASSPH
HHHHHHHHHHHHHHHHCCCCEEEEHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
LGAWRERHVSAYATAHPWEDWAETWAHYLHMVDLLETAASYHTGLDIPENGAIQTYRVGN
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
PFASDRPDFDAMVQEWVPLTLLLNSLNRSLGQQDAYPFALSSGALAKLRFVHDIVHATA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]