Click here to switch to the map view.

The map label for this gene is ctpA [H]

Identifier: 120612500

GI number: 120612500

Start: 4285184

End: 4286623

Strand: Direct

Name: ctpA [H]

Synonym: Aave_3859

Alternate gene names: 120612500

Gene position: 4285184-4286623 (Clockwise)

Preceding gene: 120612499

Following gene: 120612501

Centisome position: 80.06

GC content: 65.07

Gene sequence:

>1440_bases
ATGGGCCACAAACTCAAAATCGCAGGATGGGTGTCGGTCGGCGTCGTTGCCGGCGCTCTGACCACGGTCTCCCTGCAGAC
CGTCGCCCGCGGAGCCATGGCTCCGCTTCCCCTCGAGGAAATCCAGCAGCTCTCCGCGGTCTTCGGCCTCGTCAAGACCG
ACTACGTCGAGCCCGTGGACGACAAGAAGCTCATCACCGACGCCATCTCCGGCATGGTGTCCAGCCTCGATCCTCATTCC
CAGTACTTCGACAAGAAGTCCTTCAAGGAATTCCGAGAGGGCACCACCGGCCGCTTCGTCGGCGTGGGCATCGAGATCAC
CCAGGAAGACGGCCTGATCAAGATCGTCTCGCCCATCGAAGGCTCTCCGGCTTTCCGTGCGGGCCTGAAGACCAACGACC
TCATCACCAAGATCGACGACACGGCCGTGAAGGGGCTCGCCCTCAACGAAGCCGTGAAGAAGATGCGCGGCGAGCCCAAC
ACCCAGGTCACGCTCACCATCTTCCGCAAGGACGAGAGCCGCACCTTCCCGGTCACCGTCACGCGCGAGGAAATCAAGAC
CCAGTCCGTGAAGGGCAAGGTGGTCGAGCCCGGCTATGCCTGGATCCGGCTGTCGCAGTTCCAGGAACGCACGGTGGACG
ATTTCGTGCGCAAGGTCGAGGAAATCTACCGCCAGGATCCGAACCTCAAGGGCATGGTGCTGGACCTGCGCAACGACCCC
GGCGGCCTGCTCGACGCGGCCGTGGCCATCTCCACGGCCTTCCTGCCGGAGAACGTGACCGTCGTCTCCACCAACGGCCA
GCTCGCGGAAAGCAAGGCGGTCTACAAGGCCTCCCCCGAGTTCTACCAGCGCCGCGGCGCCGGCGACCCGCTCAAGCGGC
TGCCCGCGGCGCTCAAGAACGTTCCGCTGGTGGTGCTCGTGAACGAAGGCTCCGCCTCGGCCAGCGAGATCGTGGCCGGA
GCCCTGCAGGACCACAAGCGCGCCACCATCATGGGCAGCCAGACCTTCGGCAAGGGATCGGTGCAGACCGTCCGCCCGCT
GGGTCCGGACACCGGCATCAAGCTCACCACGGCGCGCTACTACACGCCCAGCGGCAAATCCATCCAGGCCAAGGGCATCG
TGCCCGACGTCATGGTGGACGACAGCCCCGACGGTGATCCCTTCGCCGCGCTGCGCATGCGCGAGGCGGACCTCGAAAAG
CACCTGACCAGCGGACAGGGCGAGGAGCAGAAGGACGCCGCCCGCGAAAAGGCCCGCGAAGAAGCCCGCAAGCGCCTGGA
GGAAGAGGCGAAGAAGCCCGCCGCCGAGCGCAACAAGATGCCGGAGTTCGGAACCGACAAGGACTTCCAGCTCACCCAGG
CCCTCAACCAGCTCAAGGGACTGACCGTCGTCGTCAGCAAGACGCAGACGGAGCGCAAGGAAGAGAAGAAGGACAACTGA

Upstream 100 bases:

>100_bases
CCACGATGCGCCAAAAAGCCCCGCGGGCGCGGAACTGCGCCGCGCCTGCCCTTTCCAAGGGGTGTATATTGGACCTAGAA
CCGGCAAAGGTGTTTTTCGA

Downstream 100 bases:

>100_bases
CCGGCAGGCAGCATCCTTCCGAAAAGGGCCGGGCTCCAGGGGGGTCCGGCCTTTTTGCTTTGCGCCTTTGCGCGCCAGGC
AAACCCACAACGGCTTCGCC

Product: C-terminal processing peptidase-3

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MGHKLKIAGWVSVGVVAGALTTVSLQTVARGAMAPLPLEEIQQLSAVFGLVKTDYVEPVDDKKLITDAISGMVSSLDPHS
QYFDKKSFKEFREGTTGRFVGVGIEITQEDGLIKIVSPIEGSPAFRAGLKTNDLITKIDDTAVKGLALNEAVKKMRGEPN
TQVTLTIFRKDESRTFPVTVTREEIKTQSVKGKVVEPGYAWIRLSQFQERTVDDFVRKVEEIYRQDPNLKGMVLDLRNDP
GGLLDAAVAISTAFLPENVTVVSTNGQLAESKAVYKASPEFYQRRGAGDPLKRLPAALKNVPLVVLVNEGSASASEIVAG
ALQDHKRATIMGSQTFGKGSVQTVRPLGPDTGIKLTTARYYTPSGKSIQAKGIVPDVMVDDSPDGDPFAALRMREADLEK
HLTSGQGEEQKDAAREKAREEARKRLEEEAKKPAAERNKMPEFGTDKDFQLTQALNQLKGLTVVVSKTQTERKEEKKDN

Sequences:

>Translated_479_residues
MGHKLKIAGWVSVGVVAGALTTVSLQTVARGAMAPLPLEEIQQLSAVFGLVKTDYVEPVDDKKLITDAISGMVSSLDPHS
QYFDKKSFKEFREGTTGRFVGVGIEITQEDGLIKIVSPIEGSPAFRAGLKTNDLITKIDDTAVKGLALNEAVKKMRGEPN
TQVTLTIFRKDESRTFPVTVTREEIKTQSVKGKVVEPGYAWIRLSQFQERTVDDFVRKVEEIYRQDPNLKGMVLDLRNDP
GGLLDAAVAISTAFLPENVTVVSTNGQLAESKAVYKASPEFYQRRGAGDPLKRLPAALKNVPLVVLVNEGSASASEIVAG
ALQDHKRATIMGSQTFGKGSVQTVRPLGPDTGIKLTTARYYTPSGKSIQAKGIVPDVMVDDSPDGDPFAALRMREADLEK
HLTSGQGEEQKDAAREKAREEARKRLEEEAKKPAAERNKMPEFGTDKDFQLTQALNQLKGLTVVVSKTQTERKEEKKDN
>Mature_478_residues
GHKLKIAGWVSVGVVAGALTTVSLQTVARGAMAPLPLEEIQQLSAVFGLVKTDYVEPVDDKKLITDAISGMVSSLDPHSQ
YFDKKSFKEFREGTTGRFVGVGIEITQEDGLIKIVSPIEGSPAFRAGLKTNDLITKIDDTAVKGLALNEAVKKMRGEPNT
QVTLTIFRKDESRTFPVTVTREEIKTQSVKGKVVEPGYAWIRLSQFQERTVDDFVRKVEEIYRQDPNLKGMVLDLRNDPG
GLLDAAVAISTAFLPENVTVVSTNGQLAESKAVYKASPEFYQRRGAGDPLKRLPAALKNVPLVVLVNEGSASASEIVAGA
LQDHKRATIMGSQTFGKGSVQTVRPLGPDTGIKLTTARYYTPSGKSIQAKGIVPDVMVDDSPDGDPFAALRMREADLEKH
LTSGQGEEQKDAAREKAREEARKRLEEEAKKPAAERNKMPEFGTDKDFQLTQALNQLKGLTVVVSKTQTERKEEKKDN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=338, Percent_Identity=29.2899408284024, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52324; Mature: 52193

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHKLKIAGWVSVGVVAGALTTVSLQTVARGAMAPLPLEEIQQLSAVFGLVKTDYVEPVD
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
DKKLITDAISGMVSSLDPHSQYFDKKSFKEFREGTTGRFVGVGIEITQEDGLIKIVSPIE
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCC
GSPAFRAGLKTNDLITKIDDTAVKGLALNEAVKKMRGEPNTQVTLTIFRKDESRTFPVTV
CCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEE
TREEIKTQSVKGKVVEPGYAWIRLSQFQERTVDDFVRKVEEIYRQDPNLKGMVLDLRNDP
EHHHHHHHHCCCCEECCCHHEEEEHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
GGLLDAAVAISTAFLPENVTVVSTNGQLAESKAVYKASPEFYQRRGAGDPLKRLPAALKN
CHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHC
VPLVVLVNEGSASASEIVAGALQDHKRATIMGSQTFGKGSVQTVRPLGPDTGIKLTTARY
CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEE
YTPSGKSIQAKGIVPDVMVDDSPDGDPFAALRMREADLEKHLTSGQGEEQKDAAREKARE
ECCCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
EARKRLEEEAKKPAAERNKMPEFGTDKDFQLTQALNQLKGLTVVVSKTQTERKEEKKDN
HHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHCCC
>Mature Secondary Structure 
GHKLKIAGWVSVGVVAGALTTVSLQTVARGAMAPLPLEEIQQLSAVFGLVKTDYVEPVD
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
DKKLITDAISGMVSSLDPHSQYFDKKSFKEFREGTTGRFVGVGIEITQEDGLIKIVSPIE
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCC
GSPAFRAGLKTNDLITKIDDTAVKGLALNEAVKKMRGEPNTQVTLTIFRKDESRTFPVTV
CCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEE
TREEIKTQSVKGKVVEPGYAWIRLSQFQERTVDDFVRKVEEIYRQDPNLKGMVLDLRNDP
EHHHHHHHHCCCCEECCCHHEEEEHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
GGLLDAAVAISTAFLPENVTVVSTNGQLAESKAVYKASPEFYQRRGAGDPLKRLPAALKN
CHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHC
VPLVVLVNEGSASASEIVAGALQDHKRATIMGSQTFGKGSVQTVRPLGPDTGIKLTTARY
CCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEE
YTPSGKSIQAKGIVPDVMVDDSPDGDPFAALRMREADLEKHLTSGQGEEQKDAAREKARE
ECCCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
EARKRLEEEAKKPAAERNKMPEFGTDKDFQLTQALNQLKGLTVVVSKTQTERKEEKKDN
HHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]