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The map label for this gene is fdhD [H]

Identifier: 120612467

GI number: 120612467

Start: 4250038

End: 4250979

Strand: Reverse

Name: fdhD [H]

Synonym: Aave_3826

Alternate gene names: 120612467

Gene position: 4250979-4250038 (Counterclockwise)

Preceding gene: 120612468

Following gene: 120612466

Centisome position: 79.42

GC content: 75.9

Gene sequence:

>942_bases
ATGCCGGCCGCTGCCGGCGGTCCGGGGGCGCGGGGCGGCGAGGATGGCGAGGGCGATGAAGCGGCTGCCGCGCCCGTGCC
GGAGCCCGTGGTGGCGCGCGCCGTACAGCGCCATGCGGGGGTGTCCGGCGACCTGCCGGCCGCTACCGGGGCGACGCCTG
AGGATGCCCTGGCCTGGCTGGACGATGCCGTGGCGTCGGAAGTCCCCGTCGCCCTGGTCTTCAACGGTCTCTCGCATGCC
GTCATGATGGCCACGCCCACGGACCTGCAGGCCTTCGCGCTGGGCTTCGCGCTCAGCGAGGGGCTGATCGACACGCCCGC
GGACTGCCGCGGCATCGAGGTGTTTTCGCGCAGCGGCCCGCAGGCCGGAGGCGGGGGCGTGGCCTGCGAGGTGCACCTGG
AGATCGCCACGCGCTGCTTCGCGCGGCTCAAGGAGCGGCGCCGGGCACTGGCGGGGCGCACGGGCTGCGGCCTGTGCGGC
ATCGACAGCCTGCAGGCGCTGGACCTCGTACCCGAACGCGTCCGCGCGCGCCCCTGGGCCGCGGCGCTGCCGGCCGGCGT
GGTGCTGCGCGCGGTGGCCGCCATGCCGGCCCTGCAGGTGCTGAACGCCGCCGCGGGCGCCCTGCATGCCGCGGCCTGGG
CCACGCCGGAGGGCGAACTCACCGACCTGCTGGAGGACGTGGGGCGCCACAACGCGCTCGACAAGCTGATCGGCCGCCTC
ACCCTGCAGGGGCGCTCCGGCGAGGACGGCTTCGTCGTGATGTCCAGCCGCGCCAGCTACGAGCTGGTGCGCAAATGCGC
CCGGCTCGACATCCCCCTGCTCGCCACCGTCTCCGCACCCACCTCCCTGGCCGTGGACCTGGCGGCGCAGGCCGGCATCG
CGCTCTGGGGCCTGTGCCGCCCGCCGCGTGCCGTGCGCTACACGGCCGGCGCCGATTCCTGA

Upstream 100 bases:

>100_bases
ATGGGTGCGCGTGGCCCAGGATGGCGACCGCTGGCTGGCCCATCTCACCGGGACCGGGCGCGTGCGGGCGGCGGCCAGCA
GGGGCGCCGATGCATGCACC

Downstream 100 bases:

>100_bases
GCGGAGCCGGCATCGCCCGGCCGGGCTGCCGGTGCCGCATCCGGGAACGCGGATTGCCCGAACCGGAGGACGGGCTGCGG
CGCCGCGCTGGCGCCCCGAT

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MPAAAGGPGARGGEDGEGDEAAAAPVPEPVVARAVQRHAGVSGDLPAATGATPEDALAWLDDAVASEVPVALVFNGLSHA
VMMATPTDLQAFALGFALSEGLIDTPADCRGIEVFSRSGPQAGGGGVACEVHLEIATRCFARLKERRRALAGRTGCGLCG
IDSLQALDLVPERVRARPWAAALPAGVVLRAVAAMPALQVLNAAAGALHAAAWATPEGELTDLLEDVGRHNALDKLIGRL
TLQGRSGEDGFVVMSSRASYELVRKCARLDIPLLATVSAPTSLAVDLAAQAGIALWGLCRPPRAVRYTAGADS

Sequences:

>Translated_313_residues
MPAAAGGPGARGGEDGEGDEAAAAPVPEPVVARAVQRHAGVSGDLPAATGATPEDALAWLDDAVASEVPVALVFNGLSHA
VMMATPTDLQAFALGFALSEGLIDTPADCRGIEVFSRSGPQAGGGGVACEVHLEIATRCFARLKERRRALAGRTGCGLCG
IDSLQALDLVPERVRARPWAAALPAGVVLRAVAAMPALQVLNAAAGALHAAAWATPEGELTDLLEDVGRHNALDKLIGRL
TLQGRSGEDGFVVMSSRASYELVRKCARLDIPLLATVSAPTSLAVDLAAQAGIALWGLCRPPRAVRYTAGADS
>Mature_312_residues
PAAAGGPGARGGEDGEGDEAAAAPVPEPVVARAVQRHAGVSGDLPAATGATPEDALAWLDDAVASEVPVALVFNGLSHAV
MMATPTDLQAFALGFALSEGLIDTPADCRGIEVFSRSGPQAGGGGVACEVHLEIATRCFARLKERRRALAGRTGCGLCGI
DSLQALDLVPERVRARPWAAALPAGVVLRAVAAMPALQVLNAAAGALHAAAWATPEGELTDLLEDVGRHNALDKLIGRLT
LQGRSGEDGFVVMSSRASYELVRKCARLDIPLLATVSAPTSLAVDLAAQAGIALWGLCRPPRAVRYTAGADS

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=247, Percent_Identity=47.7732793522267, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31941; Mature: 31810

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAAGGPGARGGEDGEGDEAAAAPVPEPVVARAVQRHAGVSGDLPAATGATPEDALAWL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
DDAVASEVPVALVFNGLSHAVMMATPTDLQAFALGFALSEGLIDTPADCRGIEVFSRSGP
HHHHHHHCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCC
QAGGGGVACEVHLEIATRCFARLKERRRALAGRTGCGLCGIDSLQALDLVPERVRARPWA
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH
AALPAGVVLRAVAAMPALQVLNAAAGALHAAAWATPEGELTDLLEDVGRHNALDKLIGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHE
TLQGRSGEDGFVVMSSRASYELVRKCARLDIPLLATVSAPTSLAVDLAAQAGIALWGLCR
EECCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCHHEEECCC
PPRAVRYTAGADS
CCCCEEECCCCCC
>Mature Secondary Structure 
PAAAGGPGARGGEDGEGDEAAAAPVPEPVVARAVQRHAGVSGDLPAATGATPEDALAWL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
DDAVASEVPVALVFNGLSHAVMMATPTDLQAFALGFALSEGLIDTPADCRGIEVFSRSGP
HHHHHHHCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCC
QAGGGGVACEVHLEIATRCFARLKERRRALAGRTGCGLCGIDSLQALDLVPERVRARPWA
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH
AALPAGVVLRAVAAMPALQVLNAAAGALHAAAWATPEGELTDLLEDVGRHNALDKLIGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHE
TLQGRSGEDGFVVMSSRASYELVRKCARLDIPLLATVSAPTSLAVDLAAQAGIALWGLCR
EECCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCHHEEECCC
PPRAVRYTAGADS
CCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA