Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612466
Identifier: 120612466
GI number: 120612466
Start: 4249516
End: 4249908
Strand: Reverse
Name: 120612466
Synonym: Aave_3825
Alternate gene names: NA
Gene position: 4249908-4249516 (Counterclockwise)
Preceding gene: 120612467
Following gene: 120612465
Centisome position: 79.4
GC content: 77.86
Gene sequence:
>393_bases ATGACCACCCCATCGTCCAGTTCCCCCATGCCGTCCCCGTCGAACCCGCAGCCTCCGGGTGGCCAGCCCGGTCGCGATCC CCTGTCCTTCGCCGATTCCGTCGCGGGCGAGGAGGACCCGGGAGCGGCGTTCGACAATGAGACGCCGCAAGCCGGCGCCC CGGCCGGCCCGGTGCCGCAGCCGGGGGCGTCCGACCAGCCCGCGGGGCAGGGCGGACGCGATCCGAGCCCGGCCACGCCC CCGCTGGCGCCGGGGGACGAAGCCGCACCCGGCACGCCCGGCACGGGCGAGAACCTCTGCCCCGCCTGCGGTGGCTCGGG CCGGCGCGAAGGCGCGCCCTGCACCGAATGCGCCGGCACCGGACGGGTGACCGTCGGCATCGGCGGCGCCTGA
Upstream 100 bases:
>100_bases CGGTGCCGCATCCGGGAACGCGGATTGCCCGAACCGGAGGACGGGCTGCGGCGCCGCGCTGGCGCCCCGATCCGCCTTTC CTTCAGGAGGCACATTCCTT
Downstream 100 bases:
>100_bases CCGGCGCACCGGTTGCCGGGAGCCCTGGTGCCCGGACGGGCGTGCGGCGCACCCCTGCGCAGCCGGGTGCCCCGGCGCGG CGGAGGGCTGCCGCGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTTPSSSSPMPSPSNPQPPGGQPGRDPLSFADSVAGEEDPGAAFDNETPQAGAPAGPVPQPGASDQPAGQGGRDPSPATP PLAPGDEAAPGTPGTGENLCPACGGSGRREGAPCTECAGTGRVTVGIGGA
Sequences:
>Translated_130_residues MTTPSSSSPMPSPSNPQPPGGQPGRDPLSFADSVAGEEDPGAAFDNETPQAGAPAGPVPQPGASDQPAGQGGRDPSPATP PLAPGDEAAPGTPGTGENLCPACGGSGRREGAPCTECAGTGRVTVGIGGA >Mature_129_residues TTPSSSSPMPSPSNPQPPGGQPGRDPLSFADSVAGEEDPGAAFDNETPQAGAPAGPVPQPGASDQPAGQGGRDPSPATPP LAPGDEAAPGTPGTGENLCPACGGSGRREGAPCTECAGTGRVTVGIGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12311; Mature: 12180
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPSSSSPMPSPSNPQPPGGQPGRDPLSFADSVAGEEDPGAAFDNETPQAGAPAGPVPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PGASDQPAGQGGRDPSPATPPLAPGDEAAPGTPGTGENLCPACGGSGRREGAPCTECAGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRVTVGIGGA CEEEEECCCC >Mature Secondary Structure TTPSSSSPMPSPSNPQPPGGQPGRDPLSFADSVAGEEDPGAAFDNETPQAGAPAGPVPQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PGASDQPAGQGGRDPSPATPPLAPGDEAAPGTPGTGENLCPACGGSGRREGAPCTECAGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRVTVGIGGA CEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA