| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is glnH [H]
Identifier: 120612399
GI number: 120612399
Start: 4172855
End: 4173763
Strand: Reverse
Name: glnH [H]
Synonym: Aave_3756
Alternate gene names: 120612399
Gene position: 4173763-4172855 (Counterclockwise)
Preceding gene: 120612400
Following gene: 120612398
Centisome position: 77.97
GC content: 69.64
Gene sequence:
>909_bases ATGCCGATGTCGATCCAATCCCTCCTGAAATCCTCCGTGGCAGCGCTGGCGATCGCCGGCGCCGGCGCGGCGTCCGCCCA GGGCACGCCCATCGATGCCGCGGCGTTCGATGCGCTGGTGGCGCAGGGCCCCGTCGCCAGCGCCGAGACCATCGCAGCCA GCCCCTGGGCCAGCAAGATCAAGCAGGCCGGCACGCTGCGCCTGGGCGGCACCCAGACCTCGAACCTGTTCTCGCTGCTC AACGAGAAGGACGGCAAGCTCCGCGGCTTCGACGCGGGCCTGGCGCAGCTCATCACGCGCTACATCCTGGGCGACGCGTC CAAGGTCCAGTTCACGCAGGTGAACTCGTCCACGCGCGAGCAGGTGCTGATCAACGGCCAGGTGGACATGGTCGTCGCCA CCTATTCCATCACGCCCGCGCGCGCCGAGAAAATCTCCTTCGCAGGGCCGTACTACACCTCGCAGGCCGGTGTGCTGGTG AAGGCCAGCAACCAGGCGATCCAGTCGGTCAACGACCTGGGCGGCAGGAAGGTCGCCACGCAGGCGGGCTCCACGGGCCC GGCCATCCTCGCGCAGTTCGCGCCCAAGAGCACCGTGCAGGAGTTCCAGACGCACCAGGAAGCCCTGGATGCGTTGCGCC AGGGCCGCGTGGCCGCCTACGTGACCGACCACACGCTGCTGCTCAACACCCTGAGCCTCGGTACCGCCGACGCGAAGCTC GCGGGCGCGCCCTTCGGCGCGCAGGACCCGTACGGCATCGGCCTGCCCAAGGGCTCGGACGGCGTGGCCTTCGTCAATGC GTTCCTGAAGAAGATCGAAGCCGACGGCACCTGGGCCAAGCTGTGGACGATCGCCATCGGCCAGCGCACCGGCAGCACGG CCGTCCCCACGCCGCCCGCGCTGCCCTGA
Upstream 100 bases:
>100_bases CCGGGGCGCCTCAGCCATCCAGCGCCACCGGCGGGCAGGGCGAGGGCACGTCCCGCGTGCTGTACATTGACCGACGCAAC ACTCCATCCCAAAGGACCGT
Downstream 100 bases:
>100_bases CCCGATGGGCGAGGTTGCCAGGCTCCTGGCCGACCACGGGCCTGCCTTCGGGCAGGCCCTTTTGCTGACCTGGAAGCTCA CCGCGCTGTCGTTCGTGCCG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPMSIQSLLKSSVAALAIAGAGAASAQGTPIDAAAFDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLL NEKDGKLRGFDAGLAQLITRYILGDASKVQFTQVNSSTREQVLINGQVDMVVATYSITPARAEKISFAGPYYTSQAGVLV KASNQAIQSVNDLGGRKVATQAGSTGPAILAQFAPKSTVQEFQTHQEALDALRQGRVAAYVTDHTLLLNTLSLGTADAKL AGAPFGAQDPYGIGLPKGSDGVAFVNAFLKKIEADGTWAKLWTIAIGQRTGSTAVPTPPALP
Sequences:
>Translated_302_residues MPMSIQSLLKSSVAALAIAGAGAASAQGTPIDAAAFDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLL NEKDGKLRGFDAGLAQLITRYILGDASKVQFTQVNSSTREQVLINGQVDMVVATYSITPARAEKISFAGPYYTSQAGVLV KASNQAIQSVNDLGGRKVATQAGSTGPAILAQFAPKSTVQEFQTHQEALDALRQGRVAAYVTDHTLLLNTLSLGTADAKL AGAPFGAQDPYGIGLPKGSDGVAFVNAFLKKIEADGTWAKLWTIAIGQRTGSTAVPTPPALP >Mature_301_residues PMSIQSLLKSSVAALAIAGAGAASAQGTPIDAAAFDALVAQGPVASAETIAASPWASKIKQAGTLRLGGTQTSNLFSLLN EKDGKLRGFDAGLAQLITRYILGDASKVQFTQVNSSTREQVLINGQVDMVVATYSITPARAEKISFAGPYYTSQAGVLVK ASNQAIQSVNDLGGRKVATQAGSTGPAILAQFAPKSTVQEFQTHQEALDALRQGRVAAYVTDHTLLLNTLSLGTADAKLA GAPFGAQDPYGIGLPKGSDGVAFVNAFLKKIEADGTWAKLWTIAIGQRTGSTAVPTPPALP
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=233, Percent_Identity=28.3261802575107, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787031, Length=164, Percent_Identity=33.5365853658537, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787085, Length=206, Percent_Identity=25.7281553398058, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787088, Length=212, Percent_Identity=27.3584905660377, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 31098; Mature: 30966
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSIQSLLKSSVAALAIAGAGAASAQGTPIDAAAFDALVAQGPVASAETIAASPWASKI CCCCHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHH KQAGTLRLGGTQTSNLFSLLNEKDGKLRGFDAGLAQLITRYILGDASKVQFTQVNSSTRE HHCCCEEECCCCHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC QVLINGQVDMVVATYSITPARAEKISFAGPYYTSQAGVLVKASNQAIQSVNDLGGRKVAT EEEECCCEEEEEEEEECCCHHHHHEECCCCCEECCCCEEEEECCHHHHHHHHCCCCEEEC QAGSTGPAILAQFAPKSTVQEFQTHQEALDALRQGRVAAYVTDHTLLLNTLSLGTADAKL CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEHHHHCCCCCCHH AGAPFGAQDPYGIGLPKGSDGVAFVNAFLKKIEADGTWAKLWTIAIGQRTGSTAVPTPPA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCC LP CC >Mature Secondary Structure PMSIQSLLKSSVAALAIAGAGAASAQGTPIDAAAFDALVAQGPVASAETIAASPWASKI CCCHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHH KQAGTLRLGGTQTSNLFSLLNEKDGKLRGFDAGLAQLITRYILGDASKVQFTQVNSSTRE HHCCCEEECCCCHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC QVLINGQVDMVVATYSITPARAEKISFAGPYYTSQAGVLVKASNQAIQSVNDLGGRKVAT EEEECCCEEEEEEEEECCCHHHHHEECCCCCEECCCCEEEEECCHHHHHHHHCCCCEEEC QAGSTGPAILAQFAPKSTVQEFQTHQEALDALRQGRVAAYVTDHTLLLNTLSLGTADAKL CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEHHHHCCCCCCHH AGAPFGAQDPYGIGLPKGSDGVAFVNAFLKKIEADGTWAKLWTIAIGQRTGSTAVPTPPA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCC LP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]