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The map label for this gene is glnP [H]

Identifier: 120612397

GI number: 120612397

Start: 4171391

End: 4172191

Strand: Reverse

Name: glnP [H]

Synonym: Aave_3754

Alternate gene names: 120612397

Gene position: 4172191-4171391 (Counterclockwise)

Preceding gene: 120612398

Following gene: 120612395

Centisome position: 77.94

GC content: 69.16

Gene sequence:

>801_bases
ATGAACCGCTCCCTCGAAGACATCCTGTTCGGCGCGCCGAACCCCCGCGCCCGCACGCTCACCCGCGGGATGAGCGTGGT
CGCGGCGGGCGTGCTGCTCCTGCTCGTGGCCGGCGTCGCGCTCCGCTTCCATTCCGCCGGGCAGCTCGATGCCCGCTACT
GGAAATTCTTCGCCTGGCCCACGACCTGGGCCTTCCTGGCCAAGGGCCTGCTCGGCACGCTGGCCTCGGCGGCGATGGCC
GCGGTCATCGCGCTGTCCCTGGGCCTGGTGCTGCTGGCAGGGCGCTTGGCGCGCACGCGCCTCGTGCGCTGGCCGGCCGT
GGCGGCCATCGAGTTCCTGCGGGGCACGCCGACGCTGCTGCTCATCTACGTGTGCTTCCTGGTGCTGCCGTCGATCGGCA
TCAAGCTCGGCACCTACTGGATGCTGACCCTGCCCATAGCCTTCAGCACCGCCGCGGTGGTGGCCGAGGTCTATCGCTCG
GGCGTGCTCGCCGTGCCCCGCGGCCAGACCGATGCCGCGCGCAGCCTGGGCATGACGGAGACGCAGGTGTTTTTTGCCAT
CGTGTTCCCGCAGGCCCTGCGCTACATCGTGCCGGCCCTGGTCGCGCAACTGGTCATCGTGGTGAAGGACACGACCTTCG
GCTATGTCGTCACCTATGGCGAGCTGATGCAGAACGCCCGCGTGCTCATCGCCAACTACCACTCGCTGGTGCCGGTGTAC
CTCATCGTGGCGGCGCTGTACTGCCTGGTGAACTACGCGATCTCGCGGGCGAGCCGGCGGCTCGGGCGACCGATGCATTG
A

Upstream 100 bases:

>100_bases
GCATGGCCGCCTTCGCCATCGCGGCCGCGATGTACGTGGCCAGCGGCCTGTTGATCGCCTGGGCCGGCGCCGCCCTGGAC
AGGAAGCTGCGGATCCTGCG

Downstream 100 bases:

>100_bases
GCGCGGCGGACGCCACCCGCCCGGCGGCGTCGCCGCACTATGCCCGGCTGCTGCTCGCGACCAGCGATGCCGCCAGCAGC
CGCGCGGACTTCGCGCTCAC

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNRSLEDILFGAPNPRARTLTRGMSVVAAGVLLLLVAGVALRFHSAGQLDARYWKFFAWPTTWAFLAKGLLGTLASAAMA
AVIALSLGLVLLAGRLARTRLVRWPAVAAIEFLRGTPTLLLIYVCFLVLPSIGIKLGTYWMLTLPIAFSTAAVVAEVYRS
GVLAVPRGQTDAARSLGMTETQVFFAIVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGELMQNARVLIANYHSLVPVY
LIVAALYCLVNYAISRASRRLGRPMH

Sequences:

>Translated_266_residues
MNRSLEDILFGAPNPRARTLTRGMSVVAAGVLLLLVAGVALRFHSAGQLDARYWKFFAWPTTWAFLAKGLLGTLASAAMA
AVIALSLGLVLLAGRLARTRLVRWPAVAAIEFLRGTPTLLLIYVCFLVLPSIGIKLGTYWMLTLPIAFSTAAVVAEVYRS
GVLAVPRGQTDAARSLGMTETQVFFAIVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGELMQNARVLIANYHSLVPVY
LIVAALYCLVNYAISRASRRLGRPMH
>Mature_266_residues
MNRSLEDILFGAPNPRARTLTRGMSVVAAGVLLLLVAGVALRFHSAGQLDARYWKFFAWPTTWAFLAKGLLGTLASAAMA
AVIALSLGLVLLAGRLARTRLVRWPAVAAIEFLRGTPTLLLIYVCFLVLPSIGIKLGTYWMLTLPIAFSTAAVVAEVYRS
GVLAVPRGQTDAARSLGMTETQVFFAIVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGELMQNARVLIANYHSLVPVY
LIVAALYCLVNYAISRASRRLGRPMH

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=191, Percent_Identity=30.3664921465969, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87082239, Length=201, Percent_Identity=29.8507462686567, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786873, Length=207, Percent_Identity=28.5024154589372, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788645, Length=223, Percent_Identity=24.6636771300448, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787030, Length=220, Percent_Identity=29.0909090909091, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48994930, Length=82, Percent_Identity=39.0243902439024, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787087, Length=219, Percent_Identity=22.8310502283105, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788646, Length=155, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28941; Mature: 28941

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]