Click here to switch to the map view.

The map label for this gene is 120612395

Identifier: 120612395

GI number: 120612395

Start: 4167370

End: 4169637

Strand: Reverse

Name: 120612395

Synonym: Aave_3752

Alternate gene names: NA

Gene position: 4169637-4167370 (Counterclockwise)

Preceding gene: 120612397

Following gene: 120612394

Centisome position: 77.9

GC content: 66.27

Gene sequence:

>2268_bases
ATGACACGCCGCGTCACCATCCGGACGCCCCTGGGAGAGCAGCTGCAATTCCGGCAGCTGCGGGGTAGCGAGGAGCTGAG
CCAGCTTTTCTCCTTCGACATCGACCTGCTCTCGGAAGGCCGCGACATCGATCCCAAGGCCTTGCTCGGCAAGACGGCGA
CGGTGGAGATCGAGACCGAAGGCGGCAAGCGCTACCTGGACGGCCTGGTCACGCGCTTCGGCATGCAGGGGCAGGACCAT
CGGCTGTACTCCTACCACCTGCGCCTGCAGCCCTGGCTCTGGGTGGCTACGCGGCGGCAGGACTTCCGCATCTTCCAGTT
CAAGACTGTCCCGCAGATCGTGCAGGAGGTGCTGGGCCGCTACGGTTATCCGCTGCAATTGAAGCTCACGCGCGCCTACC
GCGCCTGGGACTACTGCGTGCAGTACGGCGAGAGCGACTTCGACTTCGTCTCCCGCCTCTTGGAGCATGAGGGCGCGTAC
TACTACTTCCAGCACGCGAGCGGCCAGCACACCCTGGTGATCGCCGACGACATCGTGGCAGGCCACGAGCCCCTGCCGGG
CGCGGCCGTGATCCCGTTCTACCCGCCCGAGAAGTCGGCCGTGGCCGACCGCGAGAACATCCATGCCTGGACGCTGGGCG
AGGAGATCAAGCCCGGCCGGTACTACAACGACGACTACGACTTCAAGAAGCCGAGGTCGGACCTGTCCAACATGCGCCAG
CAGCCCCCGGGCCATGCGCACGATGCCTACGAGATCTACGAATGGCCGGGCGGCTACGTGCAGCACGGCGACGGCGAGCA
GTACGCCCGCGTGCGCCTGCAGGAAGGCCTGACCGGGCACAGCACCGTCAGGGGCGAATCGCGCCACAGGAGCCTGGCGC
CGGGCTACACCTTCACGCTGGAGAACTACCCGCGCGGCGACCAGAACCGGCAGTACCTCATCACCGGCGTCACCTACCAC
CTGCACGAGAACCCGCGCAGTTCCTCGTTCAACAGCGCCAAGCCCGGCGAGACGCTCAAGCACAACGAAGAGCACGGCTC
CTTCCAGAAGTTCAGCCTCACGGCCCAGCCCACGAGCCTGCCCTACACCCCGGCCAGAAAGACCCCCAAACCCCGCACGA
CCGGCCCGCAGACCGCCGTCGTGGTCGGCCCGGCCGGTGAAGAAATCTGGACCGACGAATACGGCCGCATCAAGGTGCAG
TTCCACTGGGACCGGCTGGGGGCGATGGACGAGAACTCCATCTGCTGGATGCGGGTGGCCACGAGCTGGGCGGGCTCGGG
CTTCGGGGCGATCTCGATCCCGCGCATTGGGCACGAAGTGGTGGTCGACTTCCTCAACGGCGATCCGGACTACCCGCTGG
TCGTGGGCTGCGTCTACAACGCCGCCAACATGCCGCCCTGGGCACTGCCGGGCAATGCCACGCAGTCGGGCATCAAGACC
AAATCCAGCAAGGGCGGGGCGTTCGGTGACGGGATGAAGAACGGCGCGGGCGACGCCAACGCGATCCGCTTCGAGGACAA
GAAGGGCGCGGAGCAGGTGTGGCTGCATGCGCAGAAGGACCAGCTCATCGAGGTGGAGAACGATGAGGACCACTGGGTGG
GCCAGGACCGCCGAAAAACGATCGACCGGGACGAGACGAACACCATCCACCGGGACCGGACCGAGACGGTCGATCGCAAC
GAGAAGATCACGGTGCATGGCTGGCGCACCGAGGAGGTCGATGGCGACGAGACCATCACCATCCACTCCAACCGCACGGA
GCGGGTGGACCACAACGAGACGATCTCGATCGGCGACAACCGCGACGAGACCGTGGGCGCCAACGAAGACATCCGCATCG
GCAGCCACCGCAGCAAGACCGTCGGGCAGAGCGAGAAGGACCGCATCGGCACCAGCTGGAACATCCGGGTGGGCACCATG
AAGACCGAGACCATCGGGATGACGGCCATGCAGAACGTGGGCCTGGCCAAGATGGTGAACGTGGGGCTGGCCTACAGCGT
CAACATCGGCGGCGTGCGCAACGACATAGTGGGCGCGAACTGGACCCGCACGGTCATCGGCAGCGACTCGGTGAGCGTGG
GCTCGGACCGCAAGGCGAGCGTGAGCGGCACGGACAGCCTGGAGGTGTCGGGCGCGCTCACGGTGAAGGCCAGGACCATC
ACGCTGGAGGCGGGCGACGAGATCACGCTGCGCTGCGGATCGAGCACGGTGCGGCTGACGCCCGCGCTCATCGAAGTGCT
GTCCTCGCTGGACAAGCTCAACTGCTAG

Upstream 100 bases:

>100_bases
TTGCCTGCTTCGGAAGCCTTTTCAACCCATCCTTACGCCTCCTATCATCGCGGCCGTTTCAACTTGACTCTGCAGCAACG
AGAGGGCTGCAGCCATAACA

Downstream 100 bases:

>100_bases
GCGCCGATGCGAGGTGCTCCGTGCGCACGTGCGGGGCATCGCCACCACCATCCAGAGAGCCACAGGTACTGCTTGCTCGC
AAGAGCGCAGTGCCTGGGCC

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs-Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 755; Mature: 754

Protein sequence:

>755_residues
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGKRYLDGLVTRFGMQGQDH
RLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAY
YYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQ
QPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLENYPRGDQNRQYLITGVTYH
LHENPRSSSFNSAKPGETLKHNEEHGSFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQ
FHWDRLGAMDENSICWMRVATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT
KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKTIDRDETNTIHRDRTETVDRN
EKITVHGWRTEEVDGDETITIHSNRTERVDHNETISIGDNRDETVGANEDIRIGSHRSKTVGQSEKDRIGTSWNIRVGTM
KTETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRNDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTI
TLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC

Sequences:

>Translated_755_residues
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGKRYLDGLVTRFGMQGQDH
RLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAY
YYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQ
QPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLENYPRGDQNRQYLITGVTYH
LHENPRSSSFNSAKPGETLKHNEEHGSFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQ
FHWDRLGAMDENSICWMRVATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT
KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKTIDRDETNTIHRDRTETVDRN
EKITVHGWRTEEVDGDETITIHSNRTERVDHNETISIGDNRDETVGANEDIRIGSHRSKTVGQSEKDRIGTSWNIRVGTM
KTETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRNDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTI
TLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC
>Mature_754_residues
TRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGKRYLDGLVTRFGMQGQDHR
LYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAYY
YFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQQ
PPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLENYPRGDQNRQYLITGVTYHL
HENPRSSSFNSAKPGETLKHNEEHGSFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQF
HWDRLGAMDENSICWMRVATSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKTK
SSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKTIDRDETNTIHRDRTETVDRNE
KITVHGWRTEEVDGDETITIHSNRTERVDHNETISIGDNRDETVGANEDIRIGSHRSKTVGQSEKDRIGTSWNIRVGTMK
TETIGMTAMQNVGLAKMVNVGLAYSVNIGGVRNDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTIT
LEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84546; Mature: 84415

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETE
CCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEEEECC
GGKRYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGR
CCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEEECCCCEEEEEECCHHHHHHHHHHH
YGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVA
CCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCEEC
GHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQ
CCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHH
QPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTL
CCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE
ENYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGETLKHNEEHGSFQKFSLTAQPTSL
CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
PYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSICWMRVA
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCEEEEEEE
TSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT
ECCCCCCCCEEECCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKT
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHC
IDRDETNTIHRDRTETVDRNEKITVHGWRTEEVDGDETITIHSNRTERVDHNETISIGDN
CCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCC
RDETVGANEDIRIGSHRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQNVGLAKMVN
CCCCCCCCCCEEECCCCCCCCCCCHHHCCCCEEEEEEEEEEECHHCHHHHHCCCHHHHHC
VGLAYSVNIGGVRNDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTI
CCEEEEEECCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCEEECEEEEEEEEEE
TLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC
EEECCCEEEEEECCCEEEECHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETE
CCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEEEECC
GGKRYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGR
CCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEEECCCCEEEEEECCHHHHHHHHHHH
YGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIVA
CCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCEEC
GHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQ
CCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHH
QPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTL
CCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE
ENYPRGDQNRQYLITGVTYHLHENPRSSSFNSAKPGETLKHNEEHGSFQKFSLTAQPTSL
CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
PYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSICWMRVA
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCEEEEEEE
TSWAGSGFGAISIPRIGHEVVVDFLNGDPDYPLVVGCVYNAANMPPWALPGNATQSGIKT
ECCCCCCCCEEECCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
KSSKGGAFGDGMKNGAGDANAIRFEDKKGAEQVWLHAQKDQLIEVENDEDHWVGQDRRKT
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHC
IDRDETNTIHRDRTETVDRNEKITVHGWRTEEVDGDETITIHSNRTERVDHNETISIGDN
CCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCC
RDETVGANEDIRIGSHRSKTVGQSEKDRIGTSWNIRVGTMKTETIGMTAMQNVGLAKMVN
CCCCCCCCCCEEECCCCCCCCCCCHHHCCCCEEEEEEEEEEECHHCHHHHHCCCHHHHHC
VGLAYSVNIGGVRNDIVGANWTRTVIGSDSVSVGSDRKASVSGTDSLEVSGALTVKARTI
CCEEEEEECCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCEEECEEEEEEEEEE
TLEAGDEITLRCGSSTVRLTPALIEVLSSLDKLNC
EEECCCEEEEEECCCEEEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA