Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120612331

Identifier: 120612331

GI number: 120612331

Start: 4063304

End: 4064176

Strand: Reverse

Name: 120612331

Synonym: Aave_3687

Alternate gene names: NA

Gene position: 4064176-4063304 (Counterclockwise)

Preceding gene: 120612332

Following gene: 120612330

Centisome position: 75.93

GC content: 67.93

Gene sequence:

>873_bases
ATGAACGATCGCTTCGACCACCTCCTGCAGCGCGCCGAGCAGCTCATCGACCGCATCGAGTCGGTGCTGCCCAGGCCGCT
TTCGGCACCCGACTGGAACGCCTCCGTGGCCTGGCGCTACCGCCGCCGCGGCGGTGGGCACGGCGCCCTGGAACCCGTGC
GGCACGTCGCGGGCATCGCGCTCGAAGACCTGAAGGAAATCGACGCGCAGAAGGAAAAGATCGAGCGCAACACCCGGCAG
TTCGTCGAAGGGCGCCCGGCCAACAACGTGCTGCTCACGGGCGCGCGCGGCACCGGCAAATCCTCCCTCATCAAGGCCTG
CCTGCAGGCCTACTCCGGGCAGGGGCTGCGGCTCATCGAAGTGGACAAGTCCGATCTCACCGACCTGCCCGACATCGTCG
ATGTGGTGGCCGGCCGTCCCGAGAAATTCATCATCTACTGCGACGACCTGAGCTTCGAGGAGGGCGAGTCCGGCTACAAG
GCGCTGAAGTCCATCCTGGACGGCTCCGTGGCCGCCTCGGCGCCCAACGTGCTGGTCTATGCGACCAGCAACCGCCGGCA
CCTGTTGCCGGAATACATGAAGGAAAACCTCAGTTACACGCATACGGCGGACGGCGAGGTGCATCCGGGCGAGGTGGTGG
AAGAGAAGATCTCGCTGTCCGAGCGCTTCGGCCTCTGGGTGAGCTTCTACCCCTTCAGCCAGGACGAATACCTGGCCATC
GTAGCGCAGTGGCTGTCCGCGCTCGGCGTGCCGGCCGCGTCCATCGAGGCGGCCCGCCCCGCCGCGCTGGTCTGGGCGCT
GGAGCGCGGCTCGCGCAGCGGCCGGGTGGCCTACCAGTTCGCGCGGGACTTCGCGGGGCGCGCCGATGGCTGA

Upstream 100 bases:

>100_bases
TGGGCCGCGGCGACGCCGCCGATACGGTCTGGACCTGCGACCTGAGCCACGAATACGTGACCATCAACGCCGACTACCGC
TCCTGATCCCTGTTCATCCC

Downstream 100 bases:

>100_bases
GTCCGTCGCATCCGGCGCCCAGCGCGCCCACACCGAGGTGGCGGTCGGCATCCTGTTCCGCCCCGATGGCGCCATGCTGC
TGTCCACGCGGCCGCCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIALEDLKEIDAQKEKIERNTRQ
FVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIEVDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYK
ALKSILDGSVAASAPNVLVYATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI
VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG

Sequences:

>Translated_290_residues
MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIALEDLKEIDAQKEKIERNTRQ
FVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIEVDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYK
ALKSILDGSVAASAPNVLVYATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI
VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG
>Mature_290_residues
MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIALEDLKEIDAQKEKIERNTRQ
FVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIEVDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYK
ALKSILDGSVAASAPNVLVYATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI
VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32067; Mature: 32067

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHH
LEDLKEIDAQKEKIERNTRQFVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
VDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYKALKSILDGSVAASAPNVLVY
ECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHCCCCCEEEE
ATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI
EECCCCCCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG
HHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNDRFDHLLQRAEQLIDRIESVLPRPLSAPDWNASVAWRYRRRGGGHGALEPVRHVAGIA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHH
LEDLKEIDAQKEKIERNTRQFVEGRPANNVLLTGARGTGKSSLIKACLQAYSGQGLRLIE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
VDKSDLTDLPDIVDVVAGRPEKFIIYCDDLSFEEGESGYKALKSILDGSVAASAPNVLVY
ECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHCCCCCEEEE
ATSNRRHLLPEYMKENLSYTHTADGEVHPGEVVEEKISLSERFGLWVSFYPFSQDEYLAI
EECCCCCCCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
VAQWLSALGVPAASIEAARPAALVWALERGSRSGRVAYQFARDFAGRADG
HHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA