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The map label for this gene is tapC [H]

Identifier: 120612325

GI number: 120612325

Start: 4058970

End: 4060187

Strand: Direct

Name: tapC [H]

Synonym: Aave_3681

Alternate gene names: 120612325

Gene position: 4058970-4060187 (Clockwise)

Preceding gene: 120612324

Following gene: 120612326

Centisome position: 75.83

GC content: 63.79

Gene sequence:

>1218_bases
ATGGCAACCGCTGCATCGAGGGACATCAAGGATTTCGTTTTCGAGTGGGAAGGCAAGGACCGCCACGGCAAGGTCGTGCG
CGGCGAGGTCCGGGCCCTGGGCGAGAACCAGGTCCAGGCGACGCTGCGGCGGCAGGGGGTGCTGCCCACCAAGATCAAGA
AGCGCCGGATGCGCAGCGGCAAGAAGATCAAGCCCAAGGACATCGCGCTCTTCACGCGGCAGATGGCCACGATGATGAAG
GCCGGGGTCCCCCTGCTGCAGGCCTTCGACATCGTGGGCCGGGGCAACACCAACGCCTCGGTCACCAAGCTGCTCAACGA
CATCCGCGCCGACGTGGAAACCGGTACTTCGCTGAACGCGGCATTCCGCAAGTACCCGATGTACTTCGACAGCCTGTACT
GCAACCTGGTGGAAGCCGGGGAGGCGGCGGGTATCCTGGAAGCACTGCTCGACCGGCTCGCGCTCTACATGGAGAAGACC
GAGGCCATCAAGTCGAAGATCCGCTCGGCGCTGATGTATCCGACGGCCGTGATCATCGTGGCCTTCGTCGTGGTCACCGT
CATCATGATCTTCGTGATCCCCGCGTTCAAGGAGGTGTTCACCTCGTTCGGTGCCGACCTGCCGGCGCCCACCCTGTTCG
TGATGGGCGTCAGCGAGATCTTCGTCCAATGGTGGTGGCTGATCTTCGGCGTGCTGGGCGGCGGCGCATACTTCTTCATG
CAGGCATGGCGGCGCAACGAGAAGATGCAGATGTTCATGGACCGGCTGCTGCTGCGCGTGCCGGTCTTCGGCGCCCTGAT
CGACAAGTCCTGCGTGGCGCGCTGGACCCGCACCCTCTCCACGATGTTCGCGGCGGGCGTTCCGCTGGTCGAGGCGCTGG
ACTCGGTGGGAGGGGCCTCGGGCAACTCGGTCTATGCGATGGCGACCGAAAGGATCCAGCAGGAAGTCTCCACCGGCACC
AGCCTGACGGCCGCGATGGGCAACGCGAACGTGTTCCCGTCCATGGTGATCCAGATGTGCGCCATCGGCGAGGAGTCGGG
CTCGATCGACCACATGCTGGGCAAGGCGGCCGACTTCTACGAGGAGGAGGTCGATGAAATGGTCGCGGGGCTGTCGAGCC
TCATGGAGCCGATCATCATCGTGTTCCTGGGCACCATCATCGGCGGCATCGTGGTGTCGATGTACCTGCCCATCTTCAAG
CTGGGACAGGTGATCTGA

Upstream 100 bases:

>100_bases
TCCGGACTCCACAAGGCACGGATGGGCCTGACCTCGCTCGAAGAGGTGCTCGCCGTGACCAACGAATAACAACGCTGCAA
TCCATCTTCAAGGGGCCCGC

Downstream 100 bases:

>100_bases
TGGGGTTCGAGCCCTGGCTGCAGGCCGCGGTGTTCGGCCTCGTCGGCCTGCTGATCGGCAGTTTTCTCAACGTCGTCATC
CACCGCCTTCCGCGCATGAT

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MATAASRDIKDFVFEWEGKDRHGKVVRGEVRALGENQVQATLRRQGVLPTKIKKRRMRSGKKIKPKDIALFTRQMATMMK
AGVPLLQAFDIVGRGNTNASVTKLLNDIRADVETGTSLNAAFRKYPMYFDSLYCNLVEAGEAAGILEALLDRLALYMEKT
EAIKSKIRSALMYPTAVIIVAFVVVTVIMIFVIPAFKEVFTSFGADLPAPTLFVMGVSEIFVQWWWLIFGVLGGGAYFFM
QAWRRNEKMQMFMDRLLLRVPVFGALIDKSCVARWTRTLSTMFAAGVPLVEALDSVGGASGNSVYAMATERIQQEVSTGT
SLTAAMGNANVFPSMVIQMCAIGEESGSIDHMLGKAADFYEEEVDEMVAGLSSLMEPIIIVFLGTIIGGIVVSMYLPIFK
LGQVI

Sequences:

>Translated_405_residues
MATAASRDIKDFVFEWEGKDRHGKVVRGEVRALGENQVQATLRRQGVLPTKIKKRRMRSGKKIKPKDIALFTRQMATMMK
AGVPLLQAFDIVGRGNTNASVTKLLNDIRADVETGTSLNAAFRKYPMYFDSLYCNLVEAGEAAGILEALLDRLALYMEKT
EAIKSKIRSALMYPTAVIIVAFVVVTVIMIFVIPAFKEVFTSFGADLPAPTLFVMGVSEIFVQWWWLIFGVLGGGAYFFM
QAWRRNEKMQMFMDRLLLRVPVFGALIDKSCVARWTRTLSTMFAAGVPLVEALDSVGGASGNSVYAMATERIQQEVSTGT
SLTAAMGNANVFPSMVIQMCAIGEESGSIDHMLGKAADFYEEEVDEMVAGLSSLMEPIIIVFLGTIIGGIVVSMYLPIFK
LGQVI
>Mature_404_residues
ATAASRDIKDFVFEWEGKDRHGKVVRGEVRALGENQVQATLRRQGVLPTKIKKRRMRSGKKIKPKDIALFTRQMATMMKA
GVPLLQAFDIVGRGNTNASVTKLLNDIRADVETGTSLNAAFRKYPMYFDSLYCNLVEAGEAAGILEALLDRLALYMEKTE
AIKSKIRSALMYPTAVIIVAFVVVTVIMIFVIPAFKEVFTSFGADLPAPTLFVMGVSEIFVQWWWLIFGVLGGGAYFFMQ
AWRRNEKMQMFMDRLLLRVPVFGALIDKSCVARWTRTLSTMFAAGVPLVEALDSVGGASGNSVYAMATERIQQEVSTGTS
LTAAMGNANVFPSMVIQMCAIGEESGSIDHMLGKAADFYEEEVDEMVAGLSSLMEPIIIVFLGTIIGGIVVSMYLPIFKL
GQVI

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=400, Percent_Identity=30, Blast_Score=195, Evalue=4e-51,
Organism=Escherichia coli, GI1786295, Length=392, Percent_Identity=28.0612244897959, Blast_Score=161, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44587; Mature: 44456

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATAASRDIKDFVFEWEGKDRHGKVVRGEVRALGENQVQATLRRQGVLPTKIKKRRMRSG
CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCC
KKIKPKDIALFTRQMATMMKAGVPLLQAFDIVGRGNTNASVTKLLNDIRADVETGTSLNA
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHH
AFRKYPMYFDSLYCNLVEAGEAAGILEALLDRLALYMEKTEAIKSKIRSALMYPTAVIIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFVVVTVIMIFVIPAFKEVFTSFGADLPAPTLFVMGVSEIFVQWWWLIFGVLGGGAYFFM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAWRRNEKMQMFMDRLLLRVPVFGALIDKSCVARWTRTLSTMFAAGVPLVEALDSVGGAS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
GNSVYAMATERIQQEVSTGTSLTAAMGNANVFPSMVIQMCAIGEESGSIDHMLGKAADFY
CCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
EEEVDEMVAGLSSLMEPIIIVFLGTIIGGIVVSMYLPIFKLGQVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]