Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is folE [H]
Identifier: 120612277
GI number: 120612277
Start: 4003620
End: 4004423
Strand: Reverse
Name: folE [H]
Synonym: Aave_3631
Alternate gene names: 120612277
Gene position: 4004423-4003620 (Counterclockwise)
Preceding gene: 120612278
Following gene: 120612276
Centisome position: 74.81
GC content: 65.42
Gene sequence:
>804_bases ATGTGGCCCGTTGGCGCCGCCAGAGCCCGCGAAACCCTTGTCGAGCCGGGGTGGCGCATCGCTGATACCATCGCCTGCAT GTTCACACACCTCGCCGACGATCCGAACAGCGCTCCCCCGCATGAAGGCGCGCCTGTCTCGGCCAAGATTCGTGAGCGCC TGCTCGCGGCCCGCAAGCGGTTCCATGCCAACGACAACATCGCCGATTTCCTGGAGCCCGGCGAACTCGAGCAACTGCTC GACGAGGTCGAGGCCAAGATGCAGGGCGTGCTCGACAGCATGGTCATCGACACGGCCGGCGATCACAACACCCAGGACAC CGCGCGCCGCGTGGCGAAGATGTACCTGGGCGAGGTGTTCCGGGGCCGCTACGTCAAGCAGCCCGCGATCACCGAGTTCC CCAATGCCGAGCACCTGAACGAGCTCATGATCGTCGGGCCGATCACCGTGCGCAGCGCCTGCAGCCACCATTTCTGCCCC GTGATCGGCAAGCTGTGGATCGGCGTGCTGCCCAATGAGCACACCAACGTCATCGGCCTGTCGAAGTACGCGCGCCTGGT GGACTGGGTCATGGGGCGCCCGCAGATCCAGGAGGAGGCCGTGGTGCAACTGGCCGACCTCATCATGGAAAAGACCCAGC CCGACGGCCTCGCGATCGTGATGGAGGCCAGCCACTTCTGCATGTCCTGGCGGGGCGTGCGCGAGATGGACAGCAAAATG CTGAACTCGGTGATGCGCGGCGTGTTCCTGAAGGACGCCGCGCTGCGCCGCGAATTCCTCTCGCTCATCCCCGGAAGGAC CTGA
Upstream 100 bases:
>100_bases GGGTGGCGTTCGCGCTCATGCGCCTCGCTCTGTGGGTGACCGGCAGCCGGTACTGAGGCGGCCCTGCCTATCGGGCGTTT GCTATTGATTTGGTAGCTCG
Downstream 100 bases:
>100_bases CATGCTCGTACGCCTGCTCTATGCGAGCCGCGCGGTGGATACCTCCAGCGCGGCCATCGAAGACATCCTGGCCCAGTCGC GCCAGCACAACCCCGGCAGC
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MWPVGAARARETLVEPGWRIADTIACMFTHLADDPNSAPPHEGAPVSAKIRERLLAARKRFHANDNIADFLEPGELEQLL DEVEAKMQGVLDSMVIDTAGDHNTQDTARRVAKMYLGEVFRGRYVKQPAITEFPNAEHLNELMIVGPITVRSACSHHFCP VIGKLWIGVLPNEHTNVIGLSKYARLVDWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKM LNSVMRGVFLKDAALRREFLSLIPGRT
Sequences:
>Translated_267_residues MWPVGAARARETLVEPGWRIADTIACMFTHLADDPNSAPPHEGAPVSAKIRERLLAARKRFHANDNIADFLEPGELEQLL DEVEAKMQGVLDSMVIDTAGDHNTQDTARRVAKMYLGEVFRGRYVKQPAITEFPNAEHLNELMIVGPITVRSACSHHFCP VIGKLWIGVLPNEHTNVIGLSKYARLVDWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKM LNSVMRGVFLKDAALRREFLSLIPGRT >Mature_267_residues MWPVGAARARETLVEPGWRIADTIACMFTHLADDPNSAPPHEGAPVSAKIRERLLAARKRFHANDNIADFLEPGELEQLL DEVEAKMQGVLDSMVIDTAGDHNTQDTARRVAKMYLGEVFRGRYVKQPAITEFPNAEHLNELMIVGPITVRSACSHHFCP VIGKLWIGVLPNEHTNVIGLSKYARLVDWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKM LNSVMRGVFLKDAALRREFLSLIPGRT
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=127, Percent_Identity=46.4566929133858, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI4503949, Length=127, Percent_Identity=46.4566929133858, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI66932970, Length=102, Percent_Identity=39.2156862745098, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI66932972, Length=88, Percent_Identity=43.1818181818182, Blast_Score=71, Evalue=8e-13, Organism=Escherichia coli, GI1788476, Length=179, Percent_Identity=32.4022346368715, Blast_Score=105, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17560486, Length=130, Percent_Identity=43.8461538461538, Blast_Score=114, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6321706, Length=188, Percent_Identity=36.1702127659575, Blast_Score=102, Evalue=4e-23, Organism=Drosophila melanogaster, GI24656791, Length=127, Percent_Identity=41.7322834645669, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24656782, Length=130, Percent_Identity=40.7692307692308, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24656796, Length=130, Percent_Identity=40.7692307692308, Blast_Score=95, Evalue=4e-20,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 29892; Mature: 29892
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPVGAARARETLVEPGWRIADTIACMFTHLADDPNSAPPHEGAPVSAKIRERLLAARKR CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FHANDNIADFLEPGELEQLLDEVEAKMQGVLDSMVIDTAGDHNTQDTARRVAKMYLGEVF HCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RGRYVKQPAITEFPNAEHLNELMIVGPITVRSACSHHFCPVIGKLWIGVLPNEHTNVIGL HCCCCCCCCCCCCCCHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHH SKYARLVDWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKM HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH LNSVMRGVFLKDAALRREFLSLIPGRT HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWPVGAARARETLVEPGWRIADTIACMFTHLADDPNSAPPHEGAPVSAKIRERLLAARKR CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FHANDNIADFLEPGELEQLLDEVEAKMQGVLDSMVIDTAGDHNTQDTARRVAKMYLGEVF HCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RGRYVKQPAITEFPNAEHLNELMIVGPITVRSACSHHFCPVIGKLWIGVLPNEHTNVIGL HCCCCCCCCCCCCCCHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHH SKYARLVDWVMGRPQIQEEAVVQLADLIMEKTQPDGLAIVMEASHFCMSWRGVREMDSKM HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHH LNSVMRGVFLKDAALRREFLSLIPGRT HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA